Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1f09
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    27   0.20 
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    25   0.79 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   1.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   1.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   1.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   1.0  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   3.2  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   4.2  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   4.2  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 26.6 bits (56), Expect = 0.20
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +2

Query: 575 NPFSLFRAFIESPRVVVNKFNLI 643
           NP+  F A ++ PR+VV+ FN++
Sbjct: 28  NPYQFFLA-VQYPRIVVSTFNIV 49


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 482 LNSCFISFSSSVWCTVGSVCS 420
           ++SC   FSSS WC   +  S
Sbjct: 135 VSSCHQGFSSSTWCNYSAYSS 155


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 383 FRVASRRVKFVVWPILNK 330
           F +A++   FVVWPI+ +
Sbjct: 232 FAIAAQATGFVVWPIIEQ 249


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 383 FRVASRRVKFVVWPILNK 330
           F +A++   FVVWPI+ +
Sbjct: 232 FAIAAQATGFVVWPIIEQ 249


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 383 FRVASRRVKFVVWPILNK 330
           F +A++   FVVWPI+ +
Sbjct: 232 FAIAAQATGFVVWPIIEQ 249


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 383 FRVASRRVKFVVWPILNK 330
           F +A++   FVVWPI+ +
Sbjct: 232 FAIAAQATGFVVWPIIEQ 249


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 278 PSRAISMRPRRCCTPKGICS 337
           P+RA+   P +C  P   CS
Sbjct: 149 PNRALDCDPTQCVLPDCFCS 168


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 64  ENRVKHGDPLYLSPQ 108
           EN   +GDP Y+SP+
Sbjct: 439 ENNHYNGDPNYISPE 453


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 64  ENRVKHGDPLYLSPQ 108
           EN   +GDP Y+SP+
Sbjct: 387 ENNHYNGDPNYISPE 401


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,976
Number of Sequences: 336
Number of extensions: 3056
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)