Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1f09
         (702 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023782-1|AAZ41791.1|  779|Drosophila melanogaster LD11946p pro...    33   0.28 
AE014134-1389|AAF52597.3| 2898|Drosophila melanogaster CG7466-PA...    29   8.1  

>BT023782-1|AAZ41791.1|  779|Drosophila melanogaster LD11946p
           protein.
          Length = 779

 Score = 33.5 bits (73), Expect = 0.28
 Identities = 21/52 (40%), Positives = 24/52 (46%)
 Frame = -3

Query: 304 WPHRNGPRRERN*TLPSLGRLGAGSTPTRCTGATRVRKTNFAAPPRCASWSA 149
           WPHR   R        S  R    S+ TRC  ATR  +T  +APPR   W A
Sbjct: 3   WPHRTSSRAAPA-RRRSPSRTLLSSSSTRCCSATR--RTMASAPPRIRRWIA 51


>AE014134-1389|AAF52597.3| 2898|Drosophila melanogaster CG7466-PA
            protein.
          Length = 2898

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = -2

Query: 569  CEQWGKHDSSARLM--CSKSVQ*TSPLLRYGLNSCFISFSSSVWCTVGSVCSTYCIWSS 399
            C + GK +SS R +  C +S +      R+G   C       VWC   + C ++ +++S
Sbjct: 1032 CGRIGKTNSSVRAVEHCPRSCR-----ERHGCQECLGERGRCVWCEASAQCFSFSVYTS 1085


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,984,143
Number of Sequences: 53049
Number of extensions: 574838
Number of successful extensions: 1366
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1365
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)