Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1f06
(436 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-2469|AAS64704.1| 1853|Drosophila melanogaster CG32972-P... 33 0.22
AE013599-545|AAF59166.2| 922|Drosophila melanogaster CG14766-PA... 32 0.39
AE014298-1416|AAF46559.1| 1161|Drosophila melanogaster CG15311-P... 31 0.68
AE014296-3423|AAF51643.2| 1959|Drosophila melanogaster CG11451-P... 31 0.89
AY928610-1|AAX28843.1| 377|Drosophila melanogaster gag protein ... 29 3.6
AY069226-1|AAL39371.1| 571|Drosophila melanogaster GH27293p pro... 29 3.6
AJ001516-2|CAC79667.1| 373|Drosophila melanogaster gag protein ... 29 3.6
AE014134-2139|AAF53150.1| 571|Drosophila melanogaster CG6785-PA... 29 3.6
AE014296-3425|AAF51645.2| 926|Drosophila melanogaster CG3680-PA... 28 4.8
AY061619-1|AAL29167.1| 428|Drosophila melanogaster SD08423p pro... 27 8.3
AE014298-2553|AAO41690.1| 1509|Drosophila melanogaster CG5424-PC... 27 8.3
AE014298-2552|AAO41689.1| 1436|Drosophila melanogaster CG5424-PD... 27 8.3
AE014298-2551|AAF48718.2| 1436|Drosophila melanogaster CG5424-PB... 27 8.3
AE014298-2550|ABI30989.1| 1918|Drosophila melanogaster CG5424-PF... 27 8.3
AE014298-1932|AAF48294.1| 428|Drosophila melanogaster CG12175-P... 27 8.3
>AE014134-2469|AAS64704.1| 1853|Drosophila melanogaster CG32972-PA,
isoform A protein.
Length = 1853
Score = 32.7 bits (71), Expect = 0.22
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = +2
Query: 149 SSIYDEVLTRDFITKNMAKFKTVALKLPV-APSTTEYVPTSISGSKKRKNSVPAKQRSSI 325
+SI D T+D T + LK AP+TT+ +PT+ + K SS
Sbjct: 1553 TSISDSTTTKDITTTAASPTTAEDLKTTTPAPTTTDNIPTTTNAPTTTKEITTTTSASST 1612
Query: 326 KNRRNTTAAPTLLMVSDNT 382
TTA T ++ T
Sbjct: 1613 DETTTTTAPTTTKDITTTT 1631
>AE013599-545|AAF59166.2| 922|Drosophila melanogaster CG14766-PA
protein.
Length = 922
Score = 31.9 bits (69), Expect = 0.39
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +2
Query: 2 PASKKRQTAVLTNANLA--ELKESCEMRDKLYSEFYSLLNETFNNNVAPLLSSIYDEVLT 175
P S+KR+ +T N + E K LYS + +++ET N +PL Y L
Sbjct: 827 PVSEKRELISITKPNQSDCEAKHRSHKDVNLYSRYPKIISETLENLTSPLRFENYTRELL 886
Query: 176 RDFITKNMAK 205
+ + ++ K
Sbjct: 887 KAYKALDVTK 896
>AE014298-1416|AAF46559.1| 1161|Drosophila melanogaster CG15311-PA
protein.
Length = 1161
Score = 31.1 bits (67), Expect = 0.68
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 215 VALKLPVAPSTTEYVPTSISGSKKRKNSVPAKQRSSIKNRRNTTAAPT 358
+A K PVA STT VPT+++ SK S + ++ T +P+
Sbjct: 340 LAKKYPVATSTTTKVPTTLATSKTTSRSSSSSTTTTTMATSTTATSPS 387
>AE014296-3423|AAF51643.2| 1959|Drosophila melanogaster CG11451-PA
protein.
Length = 1959
Score = 30.7 bits (66), Expect = 0.89
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +2
Query: 236 APSTTEYVPTSISGSKKRKNSVPAKQRSSIKNRRNTTAAPTLLMVSDNTQD 388
AP T Y PT S + ++S+ + R S KN+ T A +L M T++
Sbjct: 227 APVATLYPPTQQSLMELEEDSIVREMRESTKNQTKTPAQKSLFMDVGETKN 277
>AY928610-1|AAX28843.1| 377|Drosophila melanogaster gag protein
protein.
Length = 377
Score = 28.7 bits (61), Expect = 3.6
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +2
Query: 83 KLYSEFYSLL-NETFNNNVAPLLSSIYDEVLTRDFITKNMAKFKT-VALKLPVAPSTTE 253
K+ S+ +S+L N NN V +Y+EV F+T KT V +K +PST E
Sbjct: 197 KVRSQLFSILKNSEHNNTVVDAKKVVYNEVCLNAFMTGLKEPLKTFVRIK---SPSTLE 252
>AY069226-1|AAL39371.1| 571|Drosophila melanogaster GH27293p
protein.
Length = 571
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 260 PTSISGSKKRKNSVPAKQRSSIKNRRNTTAAPTLLMVSDNTQD 388
P I G+KK +N PA + TTAAP VSD ++
Sbjct: 333 PPRIEGNKKNQNKRPATTTTKATTTTTTTAAPD---VSDEEEE 372
>AJ001516-2|CAC79667.1| 373|Drosophila melanogaster gag protein
protein.
Length = 373
Score = 28.7 bits (61), Expect = 3.6
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +2
Query: 83 KLYSEFYSLL-NETFNNNVAPLLSSIYDEVLTRDFITKNMAKFKT-VALKLPVAPSTTE 253
K+ S+ +S+L N NN V +Y+EV F+T KT V +K +PST E
Sbjct: 197 KVRSQLFSILKNSEHNNTVVDAKKVVYNEVCLNAFMTGLKEPLKTFVRIK---SPSTLE 252
>AE014134-2139|AAF53150.1| 571|Drosophila melanogaster CG6785-PA
protein.
Length = 571
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 260 PTSISGSKKRKNSVPAKQRSSIKNRRNTTAAPTLLMVSDNTQD 388
P I G+KK +N PA + TTAAP VSD ++
Sbjct: 333 PPRIEGNKKNQNKRPATTTTKATTTTTTTAAPD---VSDEEEE 372
>AE014296-3425|AAF51645.2| 926|Drosophila melanogaster CG3680-PA
protein.
Length = 926
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 191 KNMAKFKTVALKLPVAPSTTEYVPTSISGSKKRKNSVPAKQRSSIKNRRNTTA 349
K+ A++ + P AP+T + SIS + K V K+RS+ R+T A
Sbjct: 398 KSFAQYASTKAACP-APTTPKTTVKSISPTTTTKKEVAPKKRSATPTARSTKA 449
>AY061619-1|AAL29167.1| 428|Drosophila melanogaster SD08423p
protein.
Length = 428
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +2
Query: 152 SIYDEVLTRDFITKNMAKFKTVALKLPVAPSTTEYVPTSISGSKKRKNSVPAKQ 313
++ +E+L +++ +M +L+ P +P+ EY G+KKR+ P K+
Sbjct: 215 AVKEELLPKEWFYDDMDMNDVDSLEEPKSPADDEYDYDPRYGNKKRRKRRPGKR 268
>AE014298-2553|AAO41690.1| 1509|Drosophila melanogaster CG5424-PC,
isoform C protein.
Length = 1509
Score = 27.5 bits (58), Expect = 8.3
Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 4/125 (3%)
Frame = +2
Query: 38 NANLAELKESCEMRDKLYSEFYSLLNETFNNNVAPLLSSIYDEVLTRDFITKNMAKFKTV 217
N+N+ + + SLLN ++++ L SS Y+ L ++ KN+ K
Sbjct: 682 NSNMNNSSSNIAQSSSSNNNNNSLLNRNKSHSIIGLHSSKYESSLKDNYSAKNV-NLKNQ 740
Query: 218 ALKLPVAPSTTEYV--PTSISGSKKR--KNSVPAKQRSSIKNRRNTTAAPTLLMVSDNTQ 385
L + T E V P ++ K+ KNS+ + + NT+ + + N
Sbjct: 741 LLNGGIKSDTYESVCPPEDVAERTKQTHKNSMIRNNLADASSNNNTSGSINNISNIGNMN 800
Query: 386 DTNMS 400
N S
Sbjct: 801 GGNQS 805
>AE014298-2552|AAO41689.1| 1436|Drosophila melanogaster CG5424-PD,
isoform D protein.
Length = 1436
Score = 27.5 bits (58), Expect = 8.3
Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 4/125 (3%)
Frame = +2
Query: 38 NANLAELKESCEMRDKLYSEFYSLLNETFNNNVAPLLSSIYDEVLTRDFITKNMAKFKTV 217
N+N+ + + SLLN ++++ L SS Y+ L ++ KN+ K
Sbjct: 609 NSNMNNSSSNIAQSSSSNNNNNSLLNRNKSHSIIGLHSSKYESSLKDNYSAKNV-NLKNQ 667
Query: 218 ALKLPVAPSTTEYV--PTSISGSKKR--KNSVPAKQRSSIKNRRNTTAAPTLLMVSDNTQ 385
L + T E V P ++ K+ KNS+ + + NT+ + + N
Sbjct: 668 LLNGGIKSDTYESVCPPEDVAERTKQTHKNSMIRNNLADASSNNNTSGSINNISNIGNMN 727
Query: 386 DTNMS 400
N S
Sbjct: 728 GGNQS 732
>AE014298-2551|AAF48718.2| 1436|Drosophila melanogaster CG5424-PB,
isoform B protein.
Length = 1436
Score = 27.5 bits (58), Expect = 8.3
Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 4/125 (3%)
Frame = +2
Query: 38 NANLAELKESCEMRDKLYSEFYSLLNETFNNNVAPLLSSIYDEVLTRDFITKNMAKFKTV 217
N+N+ + + SLLN ++++ L SS Y+ L ++ KN+ K
Sbjct: 609 NSNMNNSSSNIAQSSSSNNNNNSLLNRNKSHSIIGLHSSKYESSLKDNYSAKNV-NLKNQ 667
Query: 218 ALKLPVAPSTTEYV--PTSISGSKKR--KNSVPAKQRSSIKNRRNTTAAPTLLMVSDNTQ 385
L + T E V P ++ K+ KNS+ + + NT+ + + N
Sbjct: 668 LLNGGIKSDTYESVCPPEDVAERTKQTHKNSMIRNNLADASSNNNTSGSINNISNIGNMN 727
Query: 386 DTNMS 400
N S
Sbjct: 728 GGNQS 732
>AE014298-2550|ABI30989.1| 1918|Drosophila melanogaster CG5424-PF,
isoform F protein.
Length = 1918
Score = 27.5 bits (58), Expect = 8.3
Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 4/125 (3%)
Frame = +2
Query: 38 NANLAELKESCEMRDKLYSEFYSLLNETFNNNVAPLLSSIYDEVLTRDFITKNMAKFKTV 217
N+N+ + + SLLN ++++ L SS Y+ L ++ KN+ K
Sbjct: 1095 NSNMNNSSSNIAQSSSSNNNNNSLLNRNKSHSIIGLHSSKYESSLKDNYSAKNV-NLKNQ 1153
Query: 218 ALKLPVAPSTTEYV--PTSISGSKKR--KNSVPAKQRSSIKNRRNTTAAPTLLMVSDNTQ 385
L + T E V P ++ K+ KNS+ + + NT+ + + N
Sbjct: 1154 LLNGGIKSDTYESVCPPEDVAERTKQTHKNSMIRNNLADASSNNNTSGSINNISNIGNMN 1213
Query: 386 DTNMS 400
N S
Sbjct: 1214 GGNQS 1218
>AE014298-1932|AAF48294.1| 428|Drosophila melanogaster CG12175-PB
protein.
Length = 428
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +2
Query: 152 SIYDEVLTRDFITKNMAKFKTVALKLPVAPSTTEYVPTSISGSKKRKNSVPAKQ 313
++ +E+L +++ +M +L+ P +P+ EY G+KKR+ P K+
Sbjct: 215 AVKEELLPKEWFYDDMDMNDVDSLEEPKSPADDEYDYDPRYGNKKRRKRRPGKR 268
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,015,604
Number of Sequences: 53049
Number of extensions: 337757
Number of successful extensions: 1396
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1384
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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