Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1f04
         (467 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q45RF8 Cluster: Defensin-like protein; n=1; Bombyx mori...   164   1e-39
UniRef50_Q7Z0G6 Cluster: Defensin; n=2; Spodoptera frugiperda|Re...    89   6e-17
UniRef50_A4IPZ3 Cluster: Putative uncharacterized protein; n=1; ...    33   2.4  
UniRef50_A0YBP1 Cluster: TonB-dependent receptor, putative; n=1;...    33   3.1  
UniRef50_A0NME9 Cluster: Putative uncharacterized protein; n=1; ...    32   7.2  
UniRef50_Q4WLE5 Cluster: Putative uncharacterized protein; n=3; ...    32   7.2  
UniRef50_A7RZI1 Cluster: Predicted protein; n=1; Nematostella ve...    31   9.5  

>UniRef50_Q45RF8 Cluster: Defensin-like protein; n=1; Bombyx
           mori|Rep: Defensin-like protein - Bombyx mori (Silk
           moth)
          Length = 92

 Score =  164 bits (398), Expect = 1e-39
 Identities = 76/92 (82%), Positives = 76/92 (82%)
 Frame = +3

Query: 135 MAHQRKSXXXXXXXXXXXXXXXXPRDATVFDNQHSEVAIEKSTSKIDSSDVKIPGRIWCE 314
           MAHQRKS                PRDATVFDNQHSEVAIEKSTSKIDSSDVKIPGRIWCE
Sbjct: 1   MAHQRKSLVIFIFLTVLVFVFALPRDATVFDNQHSEVAIEKSTSKIDSSDVKIPGRIWCE 60

Query: 315 FEEATETAICQEHCLPKGYSYGICVSNTCSCI 410
           FEEATETAICQEHCLPKGYSYGICVSNTCSCI
Sbjct: 61  FEEATETAICQEHCLPKGYSYGICVSNTCSCI 92


>UniRef50_Q7Z0G6 Cluster: Defensin; n=2; Spodoptera frugiperda|Rep:
           Defensin - Spodoptera frugiperda (Fall armyworm)
          Length = 102

 Score = 88.6 bits (210), Expect = 6e-17
 Identities = 39/75 (52%), Positives = 54/75 (72%), Gaps = 6/75 (8%)
 Frame = +3

Query: 204 PRDATVFDNQ-----HSE-VAIEKSTSKIDSSDVKIPGRIWCEFEEATETAICQEHCLPK 365
           PRD++V + Q     H+E + ++       + + +IPGR+ C+FEEA E A+CQEHCLPK
Sbjct: 28  PRDSSVVEEQSLGPIHNEDLEVKVKPETTTTPEPRIPGRVSCDFEEANEDAVCQEHCLPK 87

Query: 366 GYSYGICVSNTCSCI 410
           GY+YGICVS+TCSCI
Sbjct: 88  GYTYGICVSHTCSCI 102


>UniRef50_A4IPZ3 Cluster: Putative uncharacterized protein; n=1;
           Geobacillus thermodenitrificans NG80-2|Rep: Putative
           uncharacterized protein - Geobacillus
           thermodenitrificans (strain NG80-2)
          Length = 145

 Score = 33.5 bits (73), Expect = 2.4
 Identities = 19/46 (41%), Positives = 27/46 (58%)
 Frame = +1

Query: 286 LRFLGGYGASSKKQQRLRFVRNIVFPKAILMEYVLVTLAVAFKKDT 423
           L  LG     + K+ RLRFV   +FPK  L+  VL+ L ++F K+T
Sbjct: 39  LHVLGKLFGFTSKRARLRFVIGFLFPKTSLV--VLIPLKLSFPKET 82


>UniRef50_A0YBP1 Cluster: TonB-dependent receptor, putative; n=1;
           marine gamma proteobacterium HTCC2143|Rep:
           TonB-dependent receptor, putative - marine gamma
           proteobacterium HTCC2143
          Length = 684

 Score = 33.1 bits (72), Expect = 3.1
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = +3

Query: 273 DSSDVKIPGRIWCEFEEATETAICQEHCLPKGYSYGI 383
           DS+DV+I GR   E EE TE  I       K Y++GI
Sbjct: 205 DSNDVEISGRAAHEAEETTEGYIANTDSKTKSYTFGI 241


>UniRef50_A0NME9 Cluster: Putative uncharacterized protein; n=1;
           Stappia aggregata IAM 12614|Rep: Putative
           uncharacterized protein - Stappia aggregata IAM 12614
          Length = 407

 Score = 31.9 bits (69), Expect = 7.2
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -1

Query: 461 FWFIHILFGIN*NVSFLNATASVTNTY 381
           FW   IL G+  N  F+ ATA +T+TY
Sbjct: 313 FWIALILLGLGWNFGFIGATAMLTDTY 339


>UniRef50_Q4WLE5 Cluster: Putative uncharacterized protein; n=3;
           Trichocomaceae|Rep: Putative uncharacterized protein -
           Aspergillus fumigatus (Sartorya fumigata)
          Length = 360

 Score = 31.9 bits (69), Expect = 7.2
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +3

Query: 237 SEVAIEKSTSKIDSSDVKIPGRIWCEFEEATETAICQ 347
           + VA+ +S  KID+ ++ IP RI  E  +  + AIC+
Sbjct: 213 TSVAMSQSKDKIDALELPIPARIIYEMNQKRQQAICR 249


>UniRef50_A7RZI1 Cluster: Predicted protein; n=1; Nematostella
            vectensis|Rep: Predicted protein - Nematostella vectensis
          Length = 1246

 Score = 31.5 bits (68), Expect = 9.5
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +3

Query: 327  TETAICQEHCLPKGYSYGICVS-NTCSC 407
            T +AI +E C PK  + G+C+  NTC C
Sbjct: 1103 TASAISKEMCSPKCQNGGVCIGPNTCKC 1130


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 429,301,836
Number of Sequences: 1657284
Number of extensions: 7654659
Number of successful extensions: 18157
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18152
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25610991215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)