Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1f03
(418 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 26 0.15
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 22 2.4
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 4.2
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 4.2
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 4.2
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 4.2
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 4.2
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 4.2
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 4.2
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 4.2
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 21 5.6
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 21 5.6
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 5.6
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 21 5.6
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 21 5.6
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 5.6
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.4
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.4
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.4
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.4
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.4
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.4
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 7.4
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 7.4
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 7.4
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 26.2 bits (55), Expect = 0.15
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = -1
Query: 202 HHIT-HIRMSFKSQPNYCRVCKLRVSTKS--HDCKRRRRSIYSYR 77
HH+ H+R F S+P C C KS + + ++Y YR
Sbjct: 2 HHLEYHLRNHFGSKPFKCEKCSYSCVNKSMLNSHLKSHSNVYQYR 46
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 22.2 bits (45), Expect = 2.4
Identities = 27/116 (23%), Positives = 46/116 (39%)
Frame = -2
Query: 348 QKTKTIIVKRPTTMNRIQIDWKPHSEDEQKMTKQEIAENIVKPCFEQFGTILHIYVCPLN 169
+ T I + +R+ H+ D KM+ Q+ EN+ E + + + P+
Sbjct: 208 KNTLIIYQNADDSFHRLSSHTLNHNSD--KMSDQQ--ENLTLK--EVDNKVYGMALSPVT 261
Query: 168 HNRIIVEYANSESVQKAMTVNDDDARFTVTEFSVVQYYNVAKTEMVNQRIDIISKN 1
HN Y NS S + VN + + + + VQY V + +SKN
Sbjct: 262 HNL----YYNSPSSENLYYVNTESLMKSENQGNDVQYERVQDVFDSQLTVKAVSKN 313
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.2
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = -2
Query: 81 TEFSVVQYYNVAKTEMVNQRIDIISKN 1
T + +QYYN+ E + + I N
Sbjct: 103 TNYKKLQYYNIINIEQIPVPVPIYCGN 129
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.2
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = -2
Query: 81 TEFSVVQYYNVAKTEMVNQRIDIISKN 1
T + +QYYN+ E + + I N
Sbjct: 103 TNYKKLQYYNIINIEQIPVPVPIYCGN 129
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.2
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = -2
Query: 81 TEFSVVQYYNVAKTEMVNQRIDIISKN 1
T + +QYYN+ E + + I N
Sbjct: 103 TNYKKLQYYNIINIEQIPVPVPIYCGN 129
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.2
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = -2
Query: 81 TEFSVVQYYNVAKTEMVNQRIDIISKN 1
T + +QYYN+ E + + I N
Sbjct: 103 TNYKKLQYYNIINIEQIPVPVPIYCGN 129
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.2
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = -2
Query: 81 TEFSVVQYYNVAKTEMVNQRIDIISKN 1
T + +QYYN+ E + + I N
Sbjct: 103 TNYKKLQYYNIINIEQIPVPVPIYCGN 129
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.2
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = -2
Query: 81 TEFSVVQYYNVAKTEMVNQRIDIISKN 1
T + +QYYN+ E + + I N
Sbjct: 103 TNYKKLQYYNIINIEQIPVPVPIYCGN 129
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 4.2
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = -2
Query: 81 TEFSVVQYYNVAKTEMVNQRIDIISKN 1
T + +QYYN+ E + + I N
Sbjct: 107 TNYKKLQYYNIINIEQIPVPVPIYCGN 133
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.2
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = -2
Query: 81 TEFSVVQYYNVAKTEMVNQRIDIISKN 1
T + +QYYN+ E + + I N
Sbjct: 103 TNYKKLQYYNIINIEQIPVPVPIYCGN 129
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 21.0 bits (42), Expect = 5.6
Identities = 8/30 (26%), Positives = 14/30 (46%)
Frame = -1
Query: 232 HCKALF*TIWHHITHIRMSFKSQPNYCRVC 143
HC F + + H+R+ +P C +C
Sbjct: 42 HCDRQFVQVANLRRHLRVHTGERPYACELC 71
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 21.0 bits (42), Expect = 5.6
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -2
Query: 147 YANSESVQKAMTVNDDDARFTVTEFSVVQYYNVA 46
Y N E +QKA + D ++ + YY +A
Sbjct: 168 YFNDEVMQKAYNIAMGDTADMKKTYNNIDYYLLA 201
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.0 bits (42), Expect = 5.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 247 LFSHFLFVFGMGFPI 291
++SHF +VFG F I
Sbjct: 114 IWSHFPYVFGEAFCI 128
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 21.0 bits (42), Expect = 5.6
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -2
Query: 147 YANSESVQKAMTVNDDDARFTVTEFSVVQYYNVA 46
Y N E +QKA + D ++ + YY +A
Sbjct: 168 YFNDEVMQKAYNIAMGDTADMKKTYNNIDYYLLA 201
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 21.0 bits (42), Expect = 5.6
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 243 IAENIVKPCFEQFGT 199
+ EN+V+ CF+Q T
Sbjct: 195 VPENLVQACFQQAQT 209
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.0 bits (42), Expect = 5.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 49 GQNRNGEPAN*HNKQE 2
G NR+GE AN +Q+
Sbjct: 1567 GNNRSGEQANSQQQQQ 1582
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 20.6 bits (41), Expect = 7.4
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +2
Query: 224 FTMFSAISCLVIFC 265
FT+F+ ++ +VI C
Sbjct: 440 FTLFTVLATIVILC 453
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 20.6 bits (41), Expect = 7.4
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +2
Query: 224 FTMFSAISCLVIFC 265
FT+F+ ++ +VI C
Sbjct: 440 FTLFTVLATIVILC 453
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 20.6 bits (41), Expect = 7.4
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +2
Query: 224 FTMFSAISCLVIFC 265
FT+F+ ++ +VI C
Sbjct: 440 FTLFTVLATIVILC 453
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 20.6 bits (41), Expect = 7.4
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +2
Query: 224 FTMFSAISCLVIFC 265
FT+F+ ++ +VI C
Sbjct: 440 FTLFTVLATIVILC 453
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 20.6 bits (41), Expect = 7.4
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +2
Query: 224 FTMFSAISCLVIFC 265
FT+F+ ++ +VI C
Sbjct: 440 FTLFTVLATIVILC 453
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 20.6 bits (41), Expect = 7.4
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +2
Query: 224 FTMFSAISCLVIFC 265
FT+F+ ++ +VI C
Sbjct: 440 FTLFTVLATIVILC 453
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 20.6 bits (41), Expect = 7.4
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -1
Query: 181 MSFKSQPNYCRVCKLRVSTKSH 116
M+F P+ + CKL++ + SH
Sbjct: 165 MNFLIYPHDTQECKLQMESLSH 186
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.6 bits (41), Expect = 7.4
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +2
Query: 224 FTMFSAISCLVIFC 265
FT+F+ ++ +VI C
Sbjct: 508 FTLFTVLATIVILC 521
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.6 bits (41), Expect = 7.4
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +2
Query: 224 FTMFSAISCLVIFC 265
FT+F+ ++ +VI C
Sbjct: 508 FTLFTVLATIVILC 521
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,756
Number of Sequences: 438
Number of extensions: 2005
Number of successful extensions: 25
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10626762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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