Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1e23
         (682 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    29   0.14 
AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        28   0.31 
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        28   0.31 
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        28   0.31 
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        28   0.31 
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   2.2  
AF269155-1|AAF91400.1|   59|Anopheles gambiae transcription fact...    23   8.9  

>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 29.1 bits (62), Expect = 0.14
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 253 LNTTV*GRPQACPSTCSLCCCINKWAAQCAECT 351
           ++ ++ G P     TC  C C + W+    ECT
Sbjct: 565 IDGSICGGPDHGICTCGTCSCFDSWSGDNCECT 597


>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 27.9 bits (59), Expect = 0.31
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 295 TCSLCCCINKWAAQCAECT 351
           TC  C C + W+    ECT
Sbjct: 3   TCGTCSCFDSWSGDNCECT 21


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 27.9 bits (59), Expect = 0.31
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 295 TCSLCCCINKWAAQCAECT 351
           TC  C C + W+    ECT
Sbjct: 3   TCGTCSCFDSWSGDNCECT 21


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 27.9 bits (59), Expect = 0.31
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 295 TCSLCCCINKWAAQCAECT 351
           TC  C C + W+    ECT
Sbjct: 3   TCGTCSCFDSWSGDNCECT 21


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 27.9 bits (59), Expect = 0.31
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 295 TCSLCCCINKWAAQCAECT 351
           TC  C C + W+    ECT
Sbjct: 3   TCGTCSCFDSWSGDNCECT 21


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +1

Query: 286 CPSTCSLCCCINKWAAQCAECTDLR 360
           C   CS   C  K   QC EC +++
Sbjct: 472 CSEQCSKAGCWGKGPEQCLECKNVK 496


>AF269155-1|AAF91400.1|   59|Anopheles gambiae transcription factor
           Deformed protein.
          Length = 59

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 653 FHYSMYDRRKR*RQIAHVQI 594
           FHY+ Y  R+R  +IAH  +
Sbjct: 20  FHYNXYLTRRRRIEIAHTLV 39


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 738,478
Number of Sequences: 2352
Number of extensions: 16401
Number of successful extensions: 29
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)