Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1e22
         (386 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0EIS1 Cluster: Chromosome undetermined scaffold_99, wh...    34   0.83 
UniRef50_A6SRL7 Cluster: Putative uncharacterized protein; n=1; ...    33   1.9  
UniRef50_A7F7U9 Cluster: Putative uncharacterized protein; n=1; ...    32   3.3  
UniRef50_Q1L936 Cluster: Novel protein; n=2; Danio rerio|Rep: No...    31   5.8  

>UniRef50_A0EIS1 Cluster: Chromosome undetermined scaffold_99, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_99,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 308

 Score = 34.3 bits (75), Expect = 0.83
 Identities = 18/30 (60%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
 Frame = -2

Query: 262 PYTTPPLYLKNNNKS*S*HIFY--YNTIKL 179
           P TTPPLYLKNN  S   H+ Y  YN+ KL
Sbjct: 7   PLTTPPLYLKNNLASTDQHMAYLSYNSDKL 36


>UniRef50_A6SRL7 Cluster: Putative uncharacterized protein; n=1;
            Botryotinia fuckeliana B05.10|Rep: Putative
            uncharacterized protein - Botryotinia fuckeliana B05.10
          Length = 1238

 Score = 33.1 bits (72), Expect = 1.9
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 248  GCSVGE*YPAPLRLPCSYCA*SQWLKCSDPP 340
            GC +    P+   +PC+YC+ S  L C DPP
Sbjct: 980  GCHLSAVNPSRAIIPCTYCSLSWHLDCLDPP 1010


>UniRef50_A7F7U9 Cluster: Putative uncharacterized protein; n=1;
            Sclerotinia sclerotiorum 1980|Rep: Putative
            uncharacterized protein - Sclerotinia sclerotiorum 1980
          Length = 1222

 Score = 32.3 bits (70), Expect = 3.3
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +2

Query: 251  CSVGE*YPAPLRLPCSYCA*SQWLKCSDPP 340
            C +    P+   +PCSYC+ S  L C DPP
Sbjct: 956  CHLSASQPSRAIIPCSYCSLSWHLDCLDPP 985


>UniRef50_Q1L936 Cluster: Novel protein; n=2; Danio rerio|Rep: Novel
           protein - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 139

 Score = 31.5 bits (68), Expect = 5.8
 Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
 Frame = +2

Query: 113 YFY-WIYLYF---VFTFILCLPLSCV*LYGIVVKYVLALRFIIIF 235
           Y Y ++YL+F   +FTF++CLP S + +Y  +  Y+    +I I+
Sbjct: 66  YIYLYVYLHFNDFLFTFLVCLPFSLI-IYIYIYIYIYIYIYIYIY 109


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 407,752,691
Number of Sequences: 1657284
Number of extensions: 8218521
Number of successful extensions: 17995
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17881
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15718494179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)