Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1e22
         (386 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003805-1|AAO41488.1|  489|Drosophila melanogaster AT15560p pro...    29   1.6  
AE014296-501|AAS64949.1|  488|Drosophila melanogaster CG33233-PA...    29   1.6  
AE014297-2221|ABI31175.1|  182|Drosophila melanogaster CG14887-P...    29   2.8  
AE014297-2220|AAF55324.1|  182|Drosophila melanogaster CG14887-P...    29   2.8  
BT023822-1|AAZ86743.1|  119|Drosophila melanogaster RH46383p pro...    28   4.9  
AE014298-2183|AAN09358.1|  119|Drosophila melanogaster CG32586-P...    27   6.4  
U06861-1|AAA19051.1|  182|Drosophila melanogaster dihydrofolate ...    27   8.5  

>BT003805-1|AAO41488.1|  489|Drosophila melanogaster AT15560p
           protein.
          Length = 489

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = +2

Query: 131 LYFVFTFILCLPLSCV*LYGIVVKYVLALRFII 229
           +Y+ FT+I C  L+ V ++ +  KYV+AL  +I
Sbjct: 352 VYYGFTYIGCFILASVLVHWMTRKYVIALHILI 384


>AE014296-501|AAS64949.1|  488|Drosophila melanogaster CG33233-PA,
           isoform A protein.
          Length = 488

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = +2

Query: 131 LYFVFTFILCLPLSCV*LYGIVVKYVLALRFII 229
           +Y+ FT+I C  L+ V ++ +  KYV+AL  +I
Sbjct: 352 VYYGFTYIGCFILASVLVHWMTRKYVIALHILI 384


>AE014297-2221|ABI31175.1|  182|Drosophila melanogaster CG14887-PB,
           isoform B protein.
          Length = 182

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -3

Query: 264 SPTLHPLYI*KIIINLKANTYFTTIP*SYTQ 172
           SP  H LYI KI+     +T+F  IP S+ +
Sbjct: 124 SPRCHRLYITKIMQKFDCDTFFPAIPDSFRE 154


>AE014297-2220|AAF55324.1|  182|Drosophila melanogaster CG14887-PA,
           isoform A protein.
          Length = 182

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -3

Query: 264 SPTLHPLYI*KIIINLKANTYFTTIP*SYTQ 172
           SP  H LYI KI+     +T+F  IP S+ +
Sbjct: 124 SPRCHRLYITKIMQKFDCDTFFPAIPDSFRE 154


>BT023822-1|AAZ86743.1|  119|Drosophila melanogaster RH46383p
           protein.
          Length = 119

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +1

Query: 145 YLYFVFTFILCITLW-YCSKICVSFKIYYYFSNIEGV*C 258
           ++YFVF  + C+  W  C   C S+++ ++     GV C
Sbjct: 75  FVYFVF-LVGCLVGWCVCITFCFSYELVFFRGGRSGVFC 112


>AE014298-2183|AAN09358.1|  119|Drosophila melanogaster CG32586-PA
           protein.
          Length = 119

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +1

Query: 145 YLYFVFTFILCITLW-YCSKICVSFKIYYYFSNIEGV*C 258
           ++YFVF  + C+  W  C   C S+++ ++     GV C
Sbjct: 75  FVYFVF-LVGCLVGWCVCITFCFSYELAFFRGGRSGVFC 112


>U06861-1|AAA19051.1|  182|Drosophila melanogaster dihydrofolate
           reductase protein.
          Length = 182

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 264 SPTLHPLYI*KIIINLKANTYFTTIP*SYTQ 172
           SP  H LYI +I+     +T+F  IP S+ +
Sbjct: 124 SPRCHRLYITQIMQKFDCDTFFPAIPDSFRE 154


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,147,871
Number of Sequences: 53049
Number of extensions: 376511
Number of successful extensions: 671
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1066083345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)