Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1e22
(386 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL031627-22|CAI79188.1| 213|Caenorhabditis elegans Hypothetical... 29 1.1
Z29117-8|CAA82380.1| 196|Caenorhabditis elegans Hypothetical pr... 29 1.5
AF047661-3|AAC04436.1| 198|Caenorhabditis elegans Hypothetical ... 28 2.0
U56963-6|AAB38123.3| 324|Caenorhabditis elegans Serpentine rece... 27 3.5
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 27 3.5
AF025452-7|AAB70941.2| 335|Caenorhabditis elegans Serpentine re... 27 3.5
AF024503-11|AAG24091.2| 325|Caenorhabditis elegans Serpentine r... 27 4.6
Z73905-2|CAA98109.3| 529|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z68215-16|CAD59144.1| 458|Caenorhabditis elegans Hypothetical p... 27 6.1
Z68160-5|CAA92293.2| 458|Caenorhabditis elegans Hypothetical pr... 27 6.1
U64846-7|AAG24116.2| 327|Caenorhabditis elegans Serpentine rece... 27 6.1
U64846-3|AAG24114.1| 327|Caenorhabditis elegans Serpentine rece... 27 6.1
Z77133-6|CAB00869.1| 338|Caenorhabditis elegans Hypothetical pr... 26 8.1
Z69794-6|CAA93683.1| 338|Caenorhabditis elegans Hypothetical pr... 26 8.1
Z68012-1|CAA92016.1| 304|Caenorhabditis elegans Hypothetical pr... 26 8.1
AF016664-1|AAB66070.2| 324|Caenorhabditis elegans Serpentine re... 26 8.1
>AL031627-22|CAI79188.1| 213|Caenorhabditis elegans Hypothetical
protein Y102A5C.36 protein.
Length = 213
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +1
Query: 115 LLLDLPLFCVYLY-FVFTFILCITLWYCSKICVS-FKIYYYFS 237
LLL L C +++ FV IL +++ K C+S FK+ Y+++
Sbjct: 11 LLLGLKNLCFFVFPFVSFIILMFLVFFTGKKCLSAFKLIYFYN 53
>Z29117-8|CAA82380.1| 196|Caenorhabditis elegans Hypothetical
protein C48B4.8 protein.
Length = 196
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 133 LFCVYLYFVFTFILCITLWYCSKICVSFKI 222
++C+ LY VF+F+ T +Y KIC + I
Sbjct: 88 IYCL-LYIVFSFLFIPTFYYDQKICTNAAI 116
>AF047661-3|AAC04436.1| 198|Caenorhabditis elegans Hypothetical
protein M70.2 protein.
Length = 198
Score = 28.3 bits (60), Expect = 2.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 157 VFTFILCITLWYCSKICVSFKIYY 228
+FT+++C LWY S+ KI+Y
Sbjct: 7 LFTWLICFFLWYASRRFEKKKIHY 30
>U56963-6|AAB38123.3| 324|Caenorhabditis elegans Serpentine
receptor, class v protein31 protein.
Length = 324
Score = 27.5 bits (58), Expect = 3.5
Identities = 11/49 (22%), Positives = 24/49 (48%)
Frame = +3
Query: 45 SDAYWSAASSSKLPLRCNVVDRNTFIGFTFILCLPLFCVYLYLVYNFMV 191
+D Y+++ + + N++ RNT + + L CV Y+ F++
Sbjct: 154 TDVYYNSMEELEYVVPKNILSRNTLMALIVLSSTCLICVVCYIALWFII 202
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 27.5 bits (58), Expect = 3.5
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -1
Query: 362 MFIRAATAVDHCTLTTDSMHNNCMVSEAGRGIIPLHYTPS 243
+ +RA A D ++ T+ +N M SE+G G P+ TPS
Sbjct: 262 LLVRAVGA-DFLSVKTEQPISNSMSSESGIGSAPVSNTPS 300
>AF025452-7|AAB70941.2| 335|Caenorhabditis elegans Serpentine
receptor, class i protein28 protein.
Length = 335
Score = 27.5 bits (58), Expect = 3.5
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 119 YWIYLYFVFTFILCLPLSCV*LYGIVV 199
YWIY + T+I CL SC+ + I +
Sbjct: 135 YWIY---ILTYIFCLSFSCLISFSIFI 158
>AF024503-11|AAG24091.2| 325|Caenorhabditis elegans Serpentine
receptor, class u protein24 protein.
Length = 325
Score = 27.1 bits (57), Expect = 4.6
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 109 GILLLDLPLFCVYLYFVFTFILCITLWYCSKI 204
GIL + +PL Y F+FTF L +C+KI
Sbjct: 150 GILKIAIPLIFTYP-FIFTFFLFPGSGFCTKI 180
>Z73905-2|CAA98109.3| 529|Caenorhabditis elegans Hypothetical
protein C32C4.1 protein.
Length = 529
Score = 26.6 bits (56), Expect = 6.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 96 NVVDRNTFIGFTFILCLPLFCV 161
N++D +T + F +CLPLF V
Sbjct: 327 NIIDLSTILPFYLEICLPLFGV 348
>Z68215-16|CAD59144.1| 458|Caenorhabditis elegans Hypothetical
protein D1046.5 protein.
Length = 458
Score = 26.6 bits (56), Expect = 6.1
Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 4/25 (16%)
Frame = +2
Query: 113 YFYWIY----LYFVFTFILCLPLSC 175
+ +W++ L V+ FI+CLPL C
Sbjct: 225 FLFWVFSSAVLALVYFFIMCLPLVC 249
>Z68160-5|CAA92293.2| 458|Caenorhabditis elegans Hypothetical
protein D1046.5 protein.
Length = 458
Score = 26.6 bits (56), Expect = 6.1
Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 4/25 (16%)
Frame = +2
Query: 113 YFYWIY----LYFVFTFILCLPLSC 175
+ +W++ L V+ FI+CLPL C
Sbjct: 225 FLFWVFSSAVLALVYFFIMCLPLVC 249
>U64846-7|AAG24116.2| 327|Caenorhabditis elegans Serpentine
receptor, class t protein37 protein.
Length = 327
Score = 26.6 bits (56), Expect = 6.1
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Frame = +1
Query: 109 GILLLDLPLFCVYLYFVF---TFILCITLWYC--SKICVSFKIYYYFS-NIE 246
GIL + +FC Y F++ F++C+ C S I V ++ +F+ NIE
Sbjct: 92 GILAIQGAVFCTYPTFIYLSGLFVMCLWCLTCLTSLILVCNRLLIFFNPNIE 143
>U64846-3|AAG24114.1| 327|Caenorhabditis elegans Serpentine
receptor, class t protein36 protein.
Length = 327
Score = 26.6 bits (56), Expect = 6.1
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Frame = +1
Query: 109 GILLLDLPLFCVYLYFVF---TFILCITLWYC--SKICVSFKIYYYFS-NIE 246
GIL + +FC Y F++ F++C+ C S I V ++ +F+ NIE
Sbjct: 92 GILAIQGAVFCTYPTFIYLSGLFVMCLWCLTCLTSLILVCNRLLIFFNPNIE 143
>Z77133-6|CAB00869.1| 338|Caenorhabditis elegans Hypothetical
protein R03G8.5 protein.
Length = 338
Score = 26.2 bits (55), Expect = 8.1
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 109 GILLLDLPLFCVYLYFVFTFILCITLWYCSKICVS-FKIYY 228
G+LL+ L +FCV F+ IL IT + CS I S F++ +
Sbjct: 27 GLLLIILNIFCVRGVFITYRILMIT-FTCSGILFSTFEVVF 66
>Z69794-6|CAA93683.1| 338|Caenorhabditis elegans Hypothetical
protein R03G8.5 protein.
Length = 338
Score = 26.2 bits (55), Expect = 8.1
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 109 GILLLDLPLFCVYLYFVFTFILCITLWYCSKICVS-FKIYY 228
G+LL+ L +FCV F+ IL IT + CS I S F++ +
Sbjct: 27 GLLLIILNIFCVRGVFITYRILMIT-FTCSGILFSTFEVVF 66
>Z68012-1|CAA92016.1| 304|Caenorhabditis elegans Hypothetical
protein T24D5.1 protein.
Length = 304
Score = 26.2 bits (55), Expect = 8.1
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -2
Query: 142 HKIKVNPIKVFLSTTLHLRGSLLELAALQYASLVAD 35
+KIK+ V LS LHL +L A+++A+ A+
Sbjct: 262 NKIKIELDTVLLSLILHLEFKFRQLNAVEFATFEAE 297
>AF016664-1|AAB66070.2| 324|Caenorhabditis elegans Serpentine
receptor, class i protein77 protein.
Length = 324
Score = 26.2 bits (55), Expect = 8.1
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = +1
Query: 124 DLPLFCVYLYFVFTFILCITLWYCSK---ICVSFKIY 225
+LP F VY+ T I +TL++ + +C+ F IY
Sbjct: 179 NLPNFVVYMKSQNTIIFLVTLFFAASFGFLCLCFTIY 215
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,497,535
Number of Sequences: 27780
Number of extensions: 203534
Number of successful extensions: 602
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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