Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1e18
         (641 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    27   0.17 
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   1.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.9  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    22   4.9  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   8.6  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   8.6  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   8.6  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
 Frame = -1

Query: 485 AVHLSFKISKHIKPHVSTFG*KHGVINLTTGGAYGYEFGNSSDNLYLWPAYTVSKGPLMV 306
           A+H+   +S  ++ + + F   H  +       + YE  N +D L LW  Y  S   L+V
Sbjct: 208 AIHV---MSYDLRGNWAGFADSHSPLYKRPHDQWAYEKLNVNDGLQLWVDYGCSPKKLIV 264

Query: 305 --PIHLKRFSLSGN 270
             P + + F+LS +
Sbjct: 265 GIPFYGRTFTLSNS 278


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -3

Query: 138 MWIDVLSHNILRKSNEHFLKIARDTNFSV 52
           ++IDV+ HN        F  I R T FSV
Sbjct: 206 IFIDVVQHNRPEFKAARFFSIDRSTLFSV 234


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -1

Query: 395  GGAYGYEFGNSSDNLYLWPAYTVSKGPLMVPIHLKRFSLSGNAD 264
            G  Y Y   N S N ++       K  + +P++ + FSL+  AD
Sbjct: 2534 GDVYDYFNANFSLNYWIEKGADPGKIVMGMPLYGQSFSLADAAD 2577


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = +1

Query: 142 ASSSNPAKQSEDTIKL--KDNHAVSKRLQKELMELMRCSDKGISAFPESENLF 294
           A  S+  + +E  +K+  ++  A +KRLQ+  +E +R S + +   P S  +F
Sbjct: 146 AEFSSSLRLTEPQVKIWFQNRRAKAKRLQEAELEKLRLSARPL--LPPSFGIF 196


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +1

Query: 568 ASYLWPNQAAYKKYLDEFYNKHKD 639
           A  LW N + Y K  +  + +H++
Sbjct: 545 AERLWTNPSDYVKQTERRFYRHRE 568


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +3

Query: 375 FIPVRTTCCQIYDSVFSSKC*HVWFNMFRYFKR 473
           F+ +   C  + + V+SSKC +    +  +FK+
Sbjct: 153 FVALLEHCFSMLNYVYSSKCENNSTGVEHFFKK 185


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = +2

Query: 347 NTNYHLNFQIHTRTHHLLSN 406
           +  +H++ Q H   HH+ +N
Sbjct: 325 HAGHHIHAQHHVVNHHVAAN 344


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,443
Number of Sequences: 336
Number of extensions: 3298
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)