Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1e18
(641 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 124 4e-29
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 124 4e-29
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 116 1e-26
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 115 3e-26
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 115 3e-26
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 107 9e-24
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 99 1e-21
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 98 4e-21
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 95 4e-20
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 86 2e-17
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 82 3e-16
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 82 4e-16
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 82 4e-16
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 80 2e-15
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 69 4e-12
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 69 4e-12
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 60 1e-09
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 60 1e-09
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 59 2e-09
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 59 3e-09
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 58 7e-09
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 56 3e-08
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 52 3e-07
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 36 0.025
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 36 0.033
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 29 3.7
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 29 3.7
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 29 3.7
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 29 3.7
AL033514-31|CAA22092.1| 444|Caenorhabditis elegans Hypothetical... 28 4.9
Z72513-2|CAA96670.1| 562|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z66567-2|CAA91488.1| 1118|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p... 27 8.6
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr... 27 8.6
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 124 bits (300), Expect = 4e-29
Identities = 60/137 (43%), Positives = 82/137 (59%), Gaps = 1/137 (0%)
Frame = +1
Query: 211 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 390
+RL ++ +L G+S P +N+ W I GP ET + +KLSLEF YP
Sbjct: 7 RRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNK 66
Query: 391 PPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTXSPLNQQA 570
PP VKF++ FHPNV G ICLDIL+++W+ YDV +L SIQSLL EPN SP N A
Sbjct: 67 PPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLA 126
Query: 571 SYLW-PNQAAYKKYLDE 618
+ L+ N+ Y+K + +
Sbjct: 127 AQLYQENRREYEKRVQQ 143
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 124 bits (300), Expect = 4e-29
Identities = 60/137 (43%), Positives = 82/137 (59%), Gaps = 1/137 (0%)
Frame = +1
Query: 211 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 390
+RL ++ +L G+S P +N+ W I GP ET + +KLSLEF YP
Sbjct: 7 RRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNK 66
Query: 391 PPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTXSPLNQQA 570
PP VKF++ FHPNV G ICLDIL+++W+ YDV +L SIQSLL EPN SP N A
Sbjct: 67 PPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLA 126
Query: 571 SYLW-PNQAAYKKYLDE 618
+ L+ N+ Y+K + +
Sbjct: 127 AQLYQENRREYEKRVQQ 143
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 116 bits (279), Expect = 1e-26
Identities = 58/129 (44%), Positives = 75/129 (58%)
Frame = +1
Query: 211 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 390
+R+ KE L+ GISA P+ N + I GP ++ +AG +KL L P YP A
Sbjct: 7 RRIIKETQRLLADPVPGISANPDESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMA 66
Query: 391 PPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTXSPLNQQA 570
P V+FMT +HPN+D G ICLDILKDKW+ +RTVLLSIQ+LL+ PN PL
Sbjct: 67 APKVRFMTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPEDPLATDV 126
Query: 571 SYLWPNQAA 597
+ W A
Sbjct: 127 AEQWKTNEA 135
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 115 bits (276), Expect = 3e-26
Identities = 57/142 (40%), Positives = 84/142 (59%), Gaps = 1/142 (0%)
Frame = +1
Query: 211 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 390
KR+QKEL +L R SA P ++LF W TI GP E+ Y G + L++ FP YP+
Sbjct: 4 KRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFK 63
Query: 391 PPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTXSPLNQQA 570
PP V F T +HPN+++ G ICLDIL+ +W+ + VLLSI SLL +PN PL +
Sbjct: 64 PPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEI 123
Query: 571 SYLW-PNQAAYKKYLDEFYNKH 633
+ ++ ++ Y + E+ K+
Sbjct: 124 ARIYKTDRERYNQLAREWTQKY 145
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 115 bits (276), Expect = 3e-26
Identities = 57/142 (40%), Positives = 84/142 (59%), Gaps = 1/142 (0%)
Frame = +1
Query: 211 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 390
KR+QKEL +L R SA P ++LF W TI GP E+ Y G + L++ FP YP+
Sbjct: 4 KRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFK 63
Query: 391 PPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTXSPLNQQA 570
PP V F T +HPN+++ G ICLDIL+ +W+ + VLLSI SLL +PN PL +
Sbjct: 64 PPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEI 123
Query: 571 SYLW-PNQAAYKKYLDEFYNKH 633
+ ++ ++ Y + E+ K+
Sbjct: 124 ARIYKTDRERYNQLAREWTQKY 145
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 107 bits (256), Expect = 9e-24
Identities = 58/141 (41%), Positives = 84/141 (59%), Gaps = 4/141 (2%)
Frame = +1
Query: 214 RLQKELMELM---RCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYP 384
RLQ+E E++ S+ GI +ENL + G I GP +T YAG + L ++ P+ YP
Sbjct: 8 RLQRECKEVVTNSEISETGIMIEILNENLTEIKGHIRGPPDTPYAGGMFDLDIKIPDQYP 67
Query: 385 YAPPVVKFMTPCFHPNVDT-CGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTXSPLN 561
++PP VKF T +HPNV + G+ICLDILKD+W A +RTVLLSIQ+L+ P P +
Sbjct: 68 FSPPNVKFSTKIWHPNVSSQTGVICLDILKDQWAASLTLRTVLLSIQALMCTPEPKDPQD 127
Query: 562 QQASYLWPNQAAYKKYLDEFY 624
+ + + A K E++
Sbjct: 128 AVVAKQYMEKPAVFKATAEYW 148
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 99 bits (238), Expect = 1e-21
Identities = 55/146 (37%), Positives = 77/146 (52%), Gaps = 13/146 (8%)
Frame = +1
Query: 184 KLKDNHAVSKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSL 363
K + + L EL L +G + +NLF W I GP +T+Y G +K S+
Sbjct: 4 KASTSSGALRALTMELKNLQSQPVEGFTIDVNEDNLFVWTVGIYGPPKTLYQGGYFKASI 63
Query: 364 EFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDILK-------------DKWTALYDVRT 504
FP++YPY+PP +KF T +HPNV G +C+ IL ++W VRT
Sbjct: 64 RFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISILHSPIDDPQSGELACERWNPTQSVRT 123
Query: 505 VLLSIQSLLAEPNTXSPLNQQASYLW 582
+LLS+ SLL EPNT SP N AS ++
Sbjct: 124 ILLSVISLLNEPNTSSPANVDASVMY 149
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 98.3 bits (234), Expect = 4e-21
Identities = 53/155 (34%), Positives = 80/155 (51%), Gaps = 15/155 (9%)
Frame = +1
Query: 211 KRLQKELMELMRCSDKGISAFP-ESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPY 387
KRL E EL +GI A P + +N F+W I GP ET +A + + FP YP
Sbjct: 7 KRLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFPQDYPL 66
Query: 388 APPVVKFMTPCFHPNVDTCGLICLDIL-------------KDKWTALYDVRTVLLSIQSL 528
+PP ++F FHPN+ G +C+ IL ++W+ + + +LLS+ S+
Sbjct: 67 SPPKMRFTCGIFHPNIYADGRVCISILHAPGDDPTGYELSNERWSPVQSIEKILLSVVSM 126
Query: 529 LAEPNTXSPLNQQASYLW-PNQAAYKKYLDEFYNK 630
LAEPN SP N A+ +W ++A ++K D K
Sbjct: 127 LAEPNDESPANVSAAKMWREDRAQFEKIADSLVRK 161
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 95.1 bits (226), Expect = 4e-20
Identities = 51/145 (35%), Positives = 81/145 (55%), Gaps = 15/145 (10%)
Frame = +1
Query: 217 LQKELMELMRCSDKGISA-FPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYAP 393
L+K+L ++ R G SA + +++KW + GP +T+Y G +K L+FP YP P
Sbjct: 8 LKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKP 67
Query: 394 PVVKFMTPCFHPNVDTCGLICLDILKD-------------KWTALYDVRTVLLSIQSLLA 534
P +KF++ +HPN+D G +C+ IL D +W ++ V T+LLS+ S+L
Sbjct: 68 PKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLT 127
Query: 535 EPNTXSPLNQQASYLW-PNQAAYKK 606
+PN SP N A+ + N A +KK
Sbjct: 128 DPNFESPANVDAAKMQRENYAEFKK 152
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 86.2 bits (204), Expect = 2e-17
Identities = 49/127 (38%), Positives = 67/127 (52%), Gaps = 16/127 (12%)
Frame = +1
Query: 223 KELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVV 402
KE+ ++ GI + NL G I GP T YAG +++ ++ P YP+ PP V
Sbjct: 28 KEVANASDITEAGIHVEIKENNLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKV 87
Query: 403 ---------------KFMTPCFHPNVDT-CGLICLDILKDKWTALYDVRTVLLSIQSLLA 534
KF+T +HPN+ + G ICLDILKDKWTA +RTVLLS+Q++L
Sbjct: 88 TEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDILKDKWTASLTLRTVLLSLQAMLC 147
Query: 535 EPNTXSP 555
P P
Sbjct: 148 SPEPSDP 154
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 82.2 bits (194), Expect = 3e-16
Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 7/121 (5%)
Frame = +1
Query: 295 KWIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVD-TCGLICLDILK 471
++I +GP +T Y +++ ++ P+ YP+ P + F+ FHPN+D G +CLD++
Sbjct: 34 EFIVRFHGPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVIN 93
Query: 472 DKWTALYDVRTVL-LSIQSLLAEPNTXSPLNQQASYLW---PNQ--AAYKKYLDEFYNKH 633
WTALYD+ + + LL PN PLN +A+ L+ P + ++Y+ F ++H
Sbjct: 94 QAWTALYDLTNIFDTFLPQLLTYPNAADPLNGEAARLYIHKPEEYRRTCREYVMRFASEH 153
Query: 634 K 636
+
Sbjct: 154 R 154
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 81.8 bits (193), Expect = 4e-16
Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Frame = +1
Query: 286 NLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDI 465
NLF W I G +T++ G Y++ + F + +P PP KF P FHPNV G +CL +
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSL 96
Query: 466 LKDK--WTALYDVRTVLLSIQSLLAEPNTXSPLNQQASYLW-PNQAAYKK 606
L + W ++ +L+ IQ LL PN P +A ++ N+A Y+K
Sbjct: 97 LDENKDWKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEK 146
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 81.8 bits (193), Expect = 4e-16
Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Frame = +1
Query: 286 NLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDI 465
NLF W I G +T++ G Y++ + F + +P PP KF P FHPNV G +CL +
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSL 96
Query: 466 LKDK--WTALYDVRTVLLSIQSLLAEPNTXSPLNQQASYLW-PNQAAYKK 606
L + W ++ +L+ IQ LL PN P +A ++ N+A Y+K
Sbjct: 97 LDENKDWKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEK 146
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 79.8 bits (188), Expect = 2e-15
Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
Frame = +1
Query: 202 AVSKRLQKELMELMRCSDKGISAFP-ESENLFKWIGTINGPLETVYAGHKYKLSLEFPNS 378
+ ++RLQKEL +L C K E NL KW + P + Y +K+ + FP
Sbjct: 2 SATRRLQKELGDLKNCGVKAYENVECEETNLLKWTVLLI-PDKEPYNKGAFKVGITFPVD 60
Query: 379 YPYAPPVVKFMTPCFHPNVDTCGLICLDIL-KDKWTALYDVRTVLLSIQSLLAEPNTXSP 555
YP+ PP V F T +HPNVD G CL I+ + W V++++ SL+ EP P
Sbjct: 61 YPFKPPKVAFETKIYHPNVDEEGKFCLPIVTAENWKPATKTEQVMMALLSLINEPEPSHP 120
Query: 556 LNQQ-ASYLWPNQAAYKKYLDEFYNKHKD 639
+ A + + K +E KH +
Sbjct: 121 IRADVAEEFQKDHKKFMKTAEEHTRKHAE 149
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 68.5 bits (160), Expect = 4e-12
Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Frame = +1
Query: 298 WIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDIL-KD 474
WI T+ GP + + G +Y++S+ F + +P PP+ +F TP HPNVD G I L +L ++
Sbjct: 71 WICTVPGPRGSPWEGGEYEVSVNF-HKWPIIPPICEFKTPLHHPNVDLRGSIYLKMLEQE 129
Query: 475 KWTALYDVRTVLLSIQSLLAEPNTXSPLNQQASYLWPNQ 591
W++ ++ +L I +LLA P+ N +A + NQ
Sbjct: 130 HWSSETSLKKLLREISNLLATPDLTQAANIEAWMEYENQ 168
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 68.5 bits (160), Expect = 4e-12
Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 4/115 (3%)
Frame = +1
Query: 202 AVSKRLQKELMELMRCSDKG--ISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPN 375
A ++RL KEL +L + +G + S +L +W + G T+YAG + L F
Sbjct: 4 AATRRLMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFTFGP 63
Query: 376 SYPYAPPVVKFM--TPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLA 534
YP+ P V F+ T HP++ + G ICL IL D WT V++V LSI S+L+
Sbjct: 64 QYPFNSPEVMFVGETIPAHPHIYSNGHICLSILSDDWTPALSVQSVCLSILSMLS 118
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 60.5 bits (140), Expect = 1e-09
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Frame = +1
Query: 304 GTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTC-GLICL-DILKDK 477
G I G ET Y G ++L ++ SYP+ P VKF+T +HP+V G ICL D+
Sbjct: 383 GIIKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDNGV 442
Query: 478 WTALYDVRTVLLSIQSLLAEPNTXSPLNQQASYLWPNQAAYKKYLDEFYNK 630
W + VL+ IQS ++ N P++ + N + EF+ K
Sbjct: 443 WPVSMTIYKVLIVIQSWMSNFNEKEPIDVEILEQATNNREVFEKTAEFWTK 493
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 60.5 bits (140), Expect = 1e-09
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Frame = +1
Query: 211 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 390
+RLQK+ +LM+ GI A P +N+ +W + G +T + G Y + F ++P++
Sbjct: 22 RRLQKDYAKLMQDPVDGIKALPNEDNILEWHYCLRGSPDTPFYGGYYWGKVIFKENFPWS 81
Query: 391 PPVVKFMTP--CFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAE 537
PP + +TP F N C L D + W + V +L+ + S + E
Sbjct: 82 PPAITMITPNGRFQTNTRLC-LSISDYHPESWNPGWTVSAILIGLHSFMNE 131
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 59.3 bits (137), Expect = 2e-09
Identities = 42/128 (32%), Positives = 66/128 (51%), Gaps = 7/128 (5%)
Frame = +1
Query: 214 RLQKELMELMRCSDKGISAFPESENL-----FKWIGTINGPLETVYAGHKYKLSLEFPNS 378
R++KE+ +L + + I F + E FK IG +G L Y + L+L+
Sbjct: 17 RIRKEIADLAKNKRRFIKDFRKIEKCKDIFQFKIIG--DGVL---YKNMIFTLTLDVNVE 71
Query: 379 YPYAPPVVKFMTPCFHPNVD--TCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTXS 552
YP+ PP +KF +HPNVD TC L +L++ W + VLL++ LL EP+
Sbjct: 72 YPFKPPYLKFCHNVYHPNVDPVTCELCSPMLLQENWKPETTMEDVLLNLIVLLNEPDLSR 131
Query: 553 PLNQQASY 576
P+N A++
Sbjct: 132 PVNIDAAH 139
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 58.8 bits (136), Expect = 3e-09
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Frame = +1
Query: 319 PLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDILKDK------W 480
P E +Y G K++ + P Y PPVVK +T +HPN++ G ICL IL+ W
Sbjct: 67 PQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGW 126
Query: 481 TALYDVRTVLLSIQSLLAE-PNTXSPLNQQASYLW-PNQAAYKKYLDEFYNKH 633
++ V+ + SL + + LN QA+ +W N+ ++ + E+ +++
Sbjct: 127 RPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNHRVREYISRY 179
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 57.6 bits (133), Expect = 7e-09
Identities = 38/109 (34%), Positives = 53/109 (48%), Gaps = 2/109 (1%)
Frame = +1
Query: 211 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 390
+RL KE MEL + ++ A P +NLF+W TI G L T + G Y + FP YP
Sbjct: 13 RRLMKEAMELRQPTEM-YHAQPMEDNLFEWHFTIRGTLGTDFEGGIYHGRIIFPADYPMK 71
Query: 391 PPVVKFMTP--CFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLL 531
PP + +TP F N C L + W + +RT LL++ L
Sbjct: 72 PPNLILLTPNGRFELNKKVC-LSISGYHPETWLPSWSIRTALLALIGFL 119
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 55.6 bits (128), Expect = 3e-08
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Frame = +1
Query: 211 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 390
+RL+K+ L++ + A P N+ +W I G +T Y G Y L FP +P+
Sbjct: 11 QRLKKDYQRLLKEPVPFMKAAPLETNILEWRYIIIGAPKTPYEGGIYMGKLLFPKDFPFK 70
Query: 391 PPVVKFMTP--CFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLL 531
PP + +TP F N C L D D W + V T++ + S +
Sbjct: 71 PPAILMLTPNGRFQTNTRLC-LSISDYHPDTWNPAWTVSTIITGLMSFM 118
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 52.4 bits (120), Expect = 3e-07
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 12/86 (13%)
Frame = +1
Query: 310 INGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTP-----CFHPNVDTCGLICLDIL-- 468
I+GP +T YA ++ + FP YP++PP F+T F+PN+ G ICL IL
Sbjct: 449 ISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGT 508
Query: 469 -----KDKWTALYDVRTVLLSIQSLL 531
++KW + VL+SIQ ++
Sbjct: 509 WEGRPEEKWNPYCSLMQVLVSIQEVI 534
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 42.3 bits (95), Expect = 3e-04
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Frame = +1
Query: 289 LFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVD-TCGLI---C 456
L +W +I GP T Y Y L ++ +YP PP V+F T V+ + G+I
Sbjct: 38 LTRWTASIIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFTTKVHMVGVNQSNGVIDKRN 97
Query: 457 LDILKDKWTALYDVRTVLLSIQSLLAEPNTXSPLNQQA 570
L L++ W+ Y ++TVL I+ + L Q A
Sbjct: 98 LTTLRN-WSNSYMIKTVLEDIRKNMMMAKENLKLQQPA 134
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 35.9 bits (79), Expect = 0.025
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +1
Query: 310 INGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMT 414
I GP +T Y +++ L FP++YP A P +KF T
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYPNALPQIKFQT 69
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 35.5 bits (78), Expect = 0.033
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +1
Query: 211 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSL 363
KR+QKEL +L R S ++L+ W TI GP E+ Y G + L++
Sbjct: 4 KRIQKELHDLGRDPPAQCSTGSVGDDLYHWQATIMGPPESPYQGGIFFLTI 54
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1
Query: 422 KHGVINLTTGGAYGYEFGNSS 360
K G T GG+YGY +GNSS
Sbjct: 198 KTGDTGKTPGGSYGYGYGNSS 218
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1
Query: 422 KHGVINLTTGGAYGYEFGNSS 360
K G T GG+YGY +GNSS
Sbjct: 208 KTGDTGKTPGGSYGYGYGNSS 228
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1
Query: 422 KHGVINLTTGGAYGYEFGNSS 360
K G T GG+YGY +GNSS
Sbjct: 311 KTGDTGKTPGGSYGYGYGNSS 331
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1
Query: 422 KHGVINLTTGGAYGYEFGNSS 360
K G T GG+YGY +GNSS
Sbjct: 279 KTGDTGKTPGGSYGYGYGNSS 299
>AL033514-31|CAA22092.1| 444|Caenorhabditis elegans Hypothetical
protein Y75B8A.32 protein.
Length = 444
Score = 28.3 bits (60), Expect = 4.9
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +2
Query: 335 TQATNTNYHLNFQIHTRTHHLLSN 406
T+ T+T HL+ Q+H H++++N
Sbjct: 171 TEITSTPVHLSMQVHQAPHNMMNN 194
>Z72513-2|CAA96670.1| 562|Caenorhabditis elegans Hypothetical
protein T04F3.3 protein.
Length = 562
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 418 CFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLA 534
CF +C L+ LDIL + TA +++ T + I +A
Sbjct: 271 CFDGFSRSCTLVALDILCQRLTASHEIGTPFVDILDTIA 309
>Z66567-2|CAA91488.1| 1118|Caenorhabditis elegans Hypothetical
protein ZK455.2 protein.
Length = 1118
Score = 27.5 bits (58), Expect = 8.6
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = +1
Query: 259 GISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVD 438
GIS ++E + W+ G LE + + KL F S +A VVK + +
Sbjct: 616 GISFNQQNEFIVMWVLCSRGSLEDILFNDELKLGRNFQVS--FAKDVVKGLNFLHTSPLL 673
Query: 439 TCGLICLD--ILKDKWT 483
G++CL ++ WT
Sbjct: 674 HHGMLCLQNCLVDSNWT 690
>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 109 NIMAQNINPHYASSSNPAKQSEDTIKLKDNHAVSKRLQKELMEL 240
N++A ++ A SS + I ++N A+ KRL+K ME+
Sbjct: 988 NLVALSVKDEVALSSGSEVEPLSDIDSEENLAIIKRLEKREMEI 1031
>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical protein
C28A5.6 protein.
Length = 1061
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 109 NIMAQNINPHYASSSNPAKQSEDTIKLKDNHAVSKRLQKELMEL 240
N++A ++ A SS + I ++N A+ KRL+K ME+
Sbjct: 988 NLVALSVKDEVALSSGSEVEPLSDIDSEENLAIIKRLEKREMEI 1031
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,408,963
Number of Sequences: 27780
Number of extensions: 300858
Number of successful extensions: 927
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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