Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1e15
         (726 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051634-1|AAK93058.1|  552|Drosophila melanogaster GH28477p pro...   316   3e-86
AE013599-2459|AAF57870.1|  552|Drosophila melanogaster CG6550-PA...   316   3e-86
AY071094-1|AAL48716.1|  583|Drosophila melanogaster RE15838p pro...    44   3e-04
AE014297-1150|AAF54531.1|  583|Drosophila melanogaster CG6345-PA...    44   3e-04
BT024225-1|ABC86287.1|  805|Drosophila melanogaster LP17019p pro...    35   0.13 
BT011159-1|AAR82827.1|  917|Drosophila melanogaster AT21454p pro...    31   1.6  
AE013599-1004|AAF58853.2|  894|Drosophila melanogaster CG2292-PA...    31   1.6  
X97196-1|CAA65830.1| 3429|Drosophila melanogaster hypothetical p...    29   4.9  
AE014298-856|AAF46135.2| 3419|Drosophila melanogaster CG3585-PA ...    29   4.9  
AE014296-1918|AAN11904.1| 1074|Drosophila melanogaster CG32082-P...    29   8.5  

>AY051634-1|AAK93058.1|  552|Drosophila melanogaster GH28477p
           protein.
          Length = 552

 Score =  316 bits (775), Expect = 3e-86
 Identities = 147/218 (67%), Positives = 181/218 (83%), Gaps = 7/218 (3%)
 Frame = +2

Query: 92  PKERYASRKNVSVRSKKREK------KDPEQIEKVILESVVPGTQTIYVKTWGCAHNNSD 253
           P+ERY ++K V+VR+KKR +      ++ E+ +  I ESV+PGTQ ++VKTWGCAHNNSD
Sbjct: 27  PRERYENKKTVTVRAKKRSQIRLESQEEEEKPKPTIHESVIPGTQKVFVKTWGCAHNNSD 86

Query: 254 SEYMAGLLAANGYKLTEDKWDAQLWLLNSCTVKSPAEDHFKNEIELGQSRGIHVVVAGCV 433
           SEYMAG LAA GY+L+  K +A LWLLNSCTVK+P+ED F+NEIE G   G HVVVAGCV
Sbjct: 87  SEYMAGQLAAYGYRLS-GKEEADLWLLNSCTVKNPSEDTFRNEIESGMRNGKHVVVAGCV 145

Query: 434 PQGAPKSGYLHGLSIVGVQQIDRIVEVVEETLKGHTVRLF-GQRKTNGRKAGGASLLLPK 610
           PQGAPKS YL+GLS++GVQQIDR+VEVVEETLKGH+V+L   ++K +GR+  GA L LPK
Sbjct: 146 PQGAPKSDYLNGLSVIGVQQIDRVVEVVEETLKGHSVQLLQNKKKVHGRRVAGAPLSLPK 205

Query: 611 VRKNPLVEIIAVNTGCLNQCTYCKTKHARGELGSYPPE 724
           VRKNPL+EII++N+GCLNQCTYCKTKHARG+L SYPPE
Sbjct: 206 VRKNPLIEIISINSGCLNQCTYCKTKHARGDLASYPPE 243


>AE013599-2459|AAF57870.1|  552|Drosophila melanogaster CG6550-PA
           protein.
          Length = 552

 Score =  316 bits (775), Expect = 3e-86
 Identities = 147/218 (67%), Positives = 181/218 (83%), Gaps = 7/218 (3%)
 Frame = +2

Query: 92  PKERYASRKNVSVRSKKREK------KDPEQIEKVILESVVPGTQTIYVKTWGCAHNNSD 253
           P+ERY ++K V+VR+KKR +      ++ E+ +  I ESV+PGTQ ++VKTWGCAHNNSD
Sbjct: 27  PRERYENKKTVTVRAKKRSQIRLESQEEEEKPKPTIHESVIPGTQKVFVKTWGCAHNNSD 86

Query: 254 SEYMAGLLAANGYKLTEDKWDAQLWLLNSCTVKSPAEDHFKNEIELGQSRGIHVVVAGCV 433
           SEYMAG LAA GY+L+  K +A LWLLNSCTVK+P+ED F+NEIE G   G HVVVAGCV
Sbjct: 87  SEYMAGQLAAYGYRLS-GKEEADLWLLNSCTVKNPSEDTFRNEIESGMRNGKHVVVAGCV 145

Query: 434 PQGAPKSGYLHGLSIVGVQQIDRIVEVVEETLKGHTVRLF-GQRKTNGRKAGGASLLLPK 610
           PQGAPKS YL+GLS++GVQQIDR+VEVVEETLKGH+V+L   ++K +GR+  GA L LPK
Sbjct: 146 PQGAPKSDYLNGLSVIGVQQIDRVVEVVEETLKGHSVQLLQNKKKVHGRRVAGAPLSLPK 205

Query: 611 VRKNPLVEIIAVNTGCLNQCTYCKTKHARGELGSYPPE 724
           VRKNPL+EII++N+GCLNQCTYCKTKHARG+L SYPPE
Sbjct: 206 VRKNPLIEIISINSGCLNQCTYCKTKHARGDLASYPPE 243


>AY071094-1|AAL48716.1|  583|Drosophila melanogaster RE15838p
           protein.
          Length = 583

 Score = 43.6 bits (98), Expect = 3e-04
 Identities = 39/181 (21%), Positives = 73/181 (40%), Gaps = 12/181 (6%)
 Frame = +2

Query: 212 IYVKTWGCAHNNSDSEYMAGLLAANGYKLTEDKWDAQLWLLNSCTVKSPAEDHFKNEIE- 388
           ++ + +GC  N +D+E +  +L  NGY   ++  +A + +L +C V+  AE   +N ++ 
Sbjct: 94  VHFEVYGCQMNTNDTEVVFSILKENGYLRCQEPEEADVIMLVTCAVRDGAEQRIRNRLKH 153

Query: 389 ---LGQSRG-----IHVVVAGCVPQGAPKSGYLHGLSIVGVQQIDRIVEVVEETLKGHTV 544
              +   R      + + + GC+ +   K   L     V V       + +   L     
Sbjct: 154 LRAMKNKRSTRRHPLQLTLLGCMAERL-KEKLLEQEQCVDVIAGPDSYKDLPRLLA--IS 210

Query: 545 RLFGQRKTN---GRKAGGASLLLPKVRKNPLVEIIAVNTGCLNQCTYCKTKHARGELGSY 715
           R +G    N         A ++  ++        +++  GC N CTYC     RG   S 
Sbjct: 211 RHYGNSAINVLLSLDETYADVMPVRLNSESPTAFVSIMRGCDNMCTYCIVPFTRGRERSR 270

Query: 716 P 718
           P
Sbjct: 271 P 271


>AE014297-1150|AAF54531.1|  583|Drosophila melanogaster CG6345-PA
           protein.
          Length = 583

 Score = 43.6 bits (98), Expect = 3e-04
 Identities = 39/181 (21%), Positives = 73/181 (40%), Gaps = 12/181 (6%)
 Frame = +2

Query: 212 IYVKTWGCAHNNSDSEYMAGLLAANGYKLTEDKWDAQLWLLNSCTVKSPAEDHFKNEIE- 388
           ++ + +GC  N +D+E +  +L  NGY   ++  +A + +L +C V+  AE   +N ++ 
Sbjct: 94  VHFEVYGCQMNTNDTEVVFSILKENGYLRCQEPEEADVIMLVTCAVRDGAEQRIRNRLKH 153

Query: 389 ---LGQSRG-----IHVVVAGCVPQGAPKSGYLHGLSIVGVQQIDRIVEVVEETLKGHTV 544
              +   R      + + + GC+ +   K   L     V V       + +   L     
Sbjct: 154 LRAMKNKRSTRRHPLQLTLLGCMAERL-KEKLLEQEQCVDVIAGPDSYKDLPRLLA--IS 210

Query: 545 RLFGQRKTN---GRKAGGASLLLPKVRKNPLVEIIAVNTGCLNQCTYCKTKHARGELGSY 715
           R +G    N         A ++  ++        +++  GC N CTYC     RG   S 
Sbjct: 211 RHYGNSAINVLLSLDETYADVMPVRLNSESPTAFVSIMRGCDNMCTYCIVPFTRGRERSR 270

Query: 716 P 718
           P
Sbjct: 271 P 271


>BT024225-1|ABC86287.1|  805|Drosophila melanogaster LP17019p
           protein.
          Length = 805

 Score = 34.7 bits (76), Expect = 0.13
 Identities = 17/61 (27%), Positives = 29/61 (47%)
 Frame = -2

Query: 458 SHFLVRPAVHSPLQQHVCHDSDQAQFHS*NDPQPGSLQYMNSTTKVAHPICLLSICSH*Q 279
           + F++RP      QQH  H   Q +  +  + +P + Q +  + +V H + L  I  H Q
Sbjct: 91  NQFIIRPIAPHQHQQHESHQEPQLRNFAAANSRPHAAQLLEQSQEVQHYVYLQDIMRHHQ 150

Query: 278 P 276
           P
Sbjct: 151 P 151


>BT011159-1|AAR82827.1|  917|Drosophila melanogaster AT21454p
           protein.
          Length = 917

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
 Frame = -3

Query: 232 APCFYIY-CLSAWYNTL*YNLFNLFGVFFLPLFRSDAYILPASVTLFRGYILGRYQIFYV 56
           A CF ++ C ++W N   +   + F    L L  S   +LP SV    GY+LG      V
Sbjct: 581 ALCFCVFACYNSWENFQ-WKSRDFFSWLALVLILSCFPLLPLSVGYQNGYLLGA----GV 635

Query: 55  VYNFITNTWHRQILFCY 5
           +  F  + W+ +   CY
Sbjct: 636 IVIFTNSFWNSKSRLCY 652


>AE013599-1004|AAF58853.2|  894|Drosophila melanogaster CG2292-PA
           protein.
          Length = 894

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
 Frame = -3

Query: 232 APCFYIY-CLSAWYNTL*YNLFNLFGVFFLPLFRSDAYILPASVTLFRGYILGRYQIFYV 56
           A CF ++ C ++W N   +   + F    L L  S   +LP SV    GY+LG      V
Sbjct: 558 ALCFCVFACYNSWENFQ-WKSRDFFSWLALVLILSCFPLLPLSVGYQNGYLLGA----GV 612

Query: 55  VYNFITNTWHRQILFCY 5
           +  F  + W+ +   CY
Sbjct: 613 IVIFTNSFWNSKSRLCY 629


>X97196-1|CAA65830.1| 3429|Drosophila melanogaster hypothetical
            protein protein.
          Length = 3429

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 602  GAVKPHPLYDRLFSSDQTDGLCDLSKSPPQP 510
            G    H L++ +  +D   G CDLS++ P P
Sbjct: 2083 GCYYHHLLHEHILGTDAATGRCDLSRAHPDP 2113


>AE014298-856|AAF46135.2| 3419|Drosophila melanogaster CG3585-PA
            protein.
          Length = 3419

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 602  GAVKPHPLYDRLFSSDQTDGLCDLSKSPPQP 510
            G    H L++ +  +D   G CDLS++ P P
Sbjct: 2076 GCYYHHLLHEHILGTDAATGRCDLSRAHPDP 2106


>AE014296-1918|AAN11904.1| 1074|Drosophila melanogaster CG32082-PA
           protein.
          Length = 1074

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
 Frame = +2

Query: 113 RKNVSVRSKKREKK-DPEQIEKVILESVVPGTQTIYVKTWGCAHNNSDSEYMAGLLAANG 289
           +K VS   K+R+KK  PE  EK +    +   Q   +  + C  + S    M       G
Sbjct: 129 QKAVSTMKKQRKKKATPENTEKELRSLQLLEDQKKKLDVF-C--DQSYKNAMTQERRRYG 185

Query: 290 YKLTEDKWDAQLWLLNSCTVKSPAEDHFKNEIELGQSRGIHVVVAGCVPQGAPKSGY 460
           + L      A+ W++   T K+  +++F+N  E+  SR I       +P  A +SGY
Sbjct: 186 FVLERQCSIAKHWMVYHTTGKTVIDNNFENWQEIAASREI-------IPPAAYESGY 235


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,124,119
Number of Sequences: 53049
Number of extensions: 773703
Number of successful extensions: 2319
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2313
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)