Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1e10
         (694 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060734-1|AAL28282.1|  334|Drosophila melanogaster GH18325p pro...    31   2.0  
AE013599-1808|AAF58308.1|  334|Drosophila melanogaster CG18568-P...    31   2.0  
AY113533-1|AAM29538.1|  274|Drosophila melanogaster RE60872p pro...    29   7.9  
AE014134-3269|AAF53913.1|  274|Drosophila melanogaster CG2617-PA...    29   7.9  

>AY060734-1|AAL28282.1|  334|Drosophila melanogaster GH18325p
           protein.
          Length = 334

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 19/69 (27%), Positives = 33/69 (47%)
 Frame = +3

Query: 177 QHAQTAARFKQACLQTGVAVQRQILLARWHKVCFSCVQQIYSHAQHNSQTDRQLASIKKP 356
           + +++ A   Q  L+TGV      +L   HK+    V+ +   AQ   Q DR+   +K+ 
Sbjct: 176 EESESKASKSQQLLETGVQTNESEILD--HKLILGEVKMVCPSAQLVDQIDRERLELKEE 233

Query: 357 GSRQTAAPF 383
             RQ++  F
Sbjct: 234 RERQSSRRF 242


>AE013599-1808|AAF58308.1|  334|Drosophila melanogaster CG18568-PA
           protein.
          Length = 334

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 19/69 (27%), Positives = 33/69 (47%)
 Frame = +3

Query: 177 QHAQTAARFKQACLQTGVAVQRQILLARWHKVCFSCVQQIYSHAQHNSQTDRQLASIKKP 356
           + +++ A   Q  L+TGV      +L   HK+    V+ +   AQ   Q DR+   +K+ 
Sbjct: 176 EESESKASKSQQLLETGVQTNESEILD--HKLILGEVKMVCPSAQLVDQIDRERLELKEE 233

Query: 357 GSRQTAAPF 383
             RQ++  F
Sbjct: 234 RERQSSRRF 242


>AY113533-1|AAM29538.1|  274|Drosophila melanogaster RE60872p
           protein.
          Length = 274

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +3

Query: 3   DQKCPTCRQDVTDFIKIFV 59
           + +CP CR ++T F+ ++V
Sbjct: 256 EDRCPVCRHNITSFLSVYV 274


>AE014134-3269|AAF53913.1|  274|Drosophila melanogaster CG2617-PA
           protein.
          Length = 274

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +3

Query: 3   DQKCPTCRQDVTDFIKIFV 59
           + +CP CR ++T F+ ++V
Sbjct: 256 EDRCPVCRHNITSFLSVYV 274


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,088,102
Number of Sequences: 53049
Number of extensions: 499680
Number of successful extensions: 1732
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1732
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)