Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1e05
         (355 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   1.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   1.6  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   1.6  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   2.8  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   2.8  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   4.9  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    20   8.6  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 9/39 (23%), Positives = 20/39 (51%)
 Frame = -2

Query: 327 IYSDIFVSCVLSLTIKSVGAAVVLRRFFIEDRCLAGTEF 211
           +++D+F +C++ +T KS+   +    F   +      EF
Sbjct: 234 LFNDVFGTCLILITGKSIVQLLTCLNFITNNLKSENEEF 272


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 351 FFKCTKFFIYSDIFVSCV 298
           F  CT +F Y+ I + CV
Sbjct: 96  FLLCTYYFYYAFIILLCV 113



 Score = 19.8 bits (39), Expect = 8.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 200 KKRKNSVPAKQRSSIKNRRN 259
           KKRK +V      S+KN+R+
Sbjct: 15  KKRKCTVSNVSLHSLKNKRS 34


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 9/39 (23%), Positives = 20/39 (51%)
 Frame = -2

Query: 327 IYSDIFVSCVLSLTIKSVGAAVVLRRFFIEDRCLAGTEF 211
           +++D+F +C++ +T KS+   +    F   +      EF
Sbjct: 234 LFNDVFGTCLILITGKSIVQLLTCLNFITNNLKSENEEF 272


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 318 DIFVSCVLSLTIKSVGAA 265
           D +V CVLSL   +VG +
Sbjct: 324 DFWVRCVLSLHCAAVGGS 341


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 347 LNVQSFLFILTYLYLVYY 294
           L V + L++LT  Y VYY
Sbjct: 104 LFVINVLYVLTLCYAVYY 121


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 341 VQSFLFILTYLYLVYY 294
           +Q FL+I TYL +  Y
Sbjct: 133 LQLFLYIFTYLSVTCY 148


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 7/25 (28%), Positives = 10/25 (40%)
 Frame = -3

Query: 86  LRRKCYSAEAQHCY*MSRLTSCKTP 12
           +RRKC     + C  +     C  P
Sbjct: 236 MRRKCQECRLKKCLSVGMRPECVVP 260


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,085
Number of Sequences: 336
Number of extensions: 1623
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7087595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)