Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1e05
(355 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 34 0.033
AC024877-2|AAF60905.2| 608|Caenorhabditis elegans Hypothetical ... 29 0.71
Z81497-6|CAB04082.2| 604|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z75953-5|CAB00102.2| 604|Caenorhabditis elegans Hypothetical pr... 29 1.2
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 29 1.2
AF043697-2|AAB97556.1| 820|Caenorhabditis elegans Patched relat... 29 1.2
Z83239-8|CAH60787.1| 311|Caenorhabditis elegans Hypothetical pr... 28 2.2
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 28 2.2
AC006619-3|AAK68253.1| 943|Caenorhabditis elegans Hypothetical ... 28 2.2
AC136145-1|AAN60521.2| 226|Caenorhabditis elegans Hypothetical ... 27 2.8
AC006742-7|ABB51176.1| 1434|Caenorhabditis elegans Ferm domain (... 27 2.8
AC006742-1|AAF60499.2| 1393|Caenorhabditis elegans Hypothetical ... 27 2.8
Z81094-6|CAB03154.1| 666|Caenorhabditis elegans Hypothetical pr... 27 3.8
Z74043-7|CAA98539.2| 705|Caenorhabditis elegans Hypothetical pr... 27 3.8
Z79759-1|CAB02138.2| 841|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z66513-7|CAA91336.2| 289|Caenorhabditis elegans Hypothetical pr... 27 5.0
Y08815-1|CAA70049.1| 289|Caenorhabditis elegans TFIIE-beta prot... 27 5.0
U88310-2|AAB42338.2| 635|Caenorhabditis elegans Hypothetical pr... 27 5.0
AF153275-1|AAD54940.1| 301|Caenorhabditis elegans transcription... 27 5.0
AF003145-2|AAB57715.2| 301|Caenorhabditis elegans Runt related ... 27 5.0
AB027412-1|BAA77765.1| 301|Caenorhabditis elegans RNT-1 protein. 27 5.0
Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical pr... 26 6.6
Z81495-11|CAN99657.1| 339|Caenorhabditis elegans Hypothetical p... 26 6.6
Z81495-10|CAD57692.1| 480|Caenorhabditis elegans Hypothetical p... 26 6.6
Z81495-9|CAB04064.1| 389|Caenorhabditis elegans Hypothetical pr... 26 6.6
U67953-4|AAL13329.1| 732|Caenorhabditis elegans Hypothetical pr... 26 6.6
U41554-3|AAA83298.2| 745|Caenorhabditis elegans Nematode astaci... 26 6.6
AL032644-11|CAN99705.1| 339|Caenorhabditis elegans Hypothetical... 26 6.6
AL032644-10|CAD57710.1| 480|Caenorhabditis elegans Hypothetical... 26 6.6
AL032644-9|CAA21673.1| 389|Caenorhabditis elegans Hypothetical ... 26 6.6
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z81514-6|CAB62802.1| 712|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z77660-2|CAB01176.1| 361|Caenorhabditis elegans Hypothetical pr... 26 8.7
U80842-13|AAB37943.1| 208|Caenorhabditis elegans Hypothetical p... 26 8.7
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 26 8.7
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 33.9 bits (74), Expect = 0.033
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 137 ALKLPVAPSTTEYVPTSISGSKKRKNSVPAKQRSSIKNRRNTTAAPTLL--MVSDNTQDT 310
+L V ST + TS SK + VP++ S+ N +T + TLL +S +TQ T
Sbjct: 1387 SLPSTVPSSTQSFSSTSEGSSKASSSPVPSQTSSTPTNPTGSTESSTLLSSTISGSTQHT 1446
Query: 311 NMSE 322
MS+
Sbjct: 1447 TMSK 1450
>AC024877-2|AAF60905.2| 608|Caenorhabditis elegans Hypothetical
protein Y95B8A.7 protein.
Length = 608
Score = 29.5 bits (63), Expect = 0.71
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +2
Query: 11 SEFYSLLNE--TFNNNVAPLLSSIYDEV-LTRDFITKNMAKFKTVALKLPVAPSTTEYVP 181
+E Y+ LN F +NV L+S I + + D I +++ K ++LP +TTE P
Sbjct: 264 NEKYAGLNPGVEFISNVDRLISDINESLKYVSDKIERDVRKIPEDVVELPTTTTTTEQPP 323
Query: 182 TSISGSKK 205
++ G +
Sbjct: 324 RTVLGCSR 331
>Z81497-6|CAB04082.2| 604|Caenorhabditis elegans Hypothetical
protein F10C2.3 protein.
Length = 604
Score = 28.7 bits (61), Expect = 1.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 351 FFKCTKFFIYSDIFVSCVLSLTIKS 277
FF CT F++ D+F S +S +K+
Sbjct: 11 FFLCTTVFLFPDLFASSTISRNLKT 35
>Z75953-5|CAB00102.2| 604|Caenorhabditis elegans Hypothetical
protein F10C2.3 protein.
Length = 604
Score = 28.7 bits (61), Expect = 1.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 351 FFKCTKFFIYSDIFVSCVLSLTIKS 277
FF CT F++ D+F S +S +K+
Sbjct: 11 FFLCTTVFLFPDLFASSTISRNLKT 35
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/87 (21%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Frame = +2
Query: 29 LNETFNNNVAPLLSSIYDEVLTRDFITKNMAKFKTVA----LKLPVAPSTTEYVPTSISG 196
LN ++ AP + +++ + ++ ++ + A A LK AP+ PT+ G
Sbjct: 54 LNVFLTDHTAPFVDKVFEALTSKSYMPASTAPTSASATAPDLKKEKAPAEKPSKPTAPPG 113
Query: 197 SKKRKNSVPAKQRSSIKNRRNTTAAPT 277
+K +S A + S R+ + P+
Sbjct: 114 VQKSSSSPSASKAESRPLRKRISPPPS 140
>AF043697-2|AAB97556.1| 820|Caenorhabditis elegans Patched related
family protein 11 protein.
Length = 820
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -2
Query: 231 CLAGTEFFLFLLPLIEVGTYSVV 163
C AG FL +LPLI V TY++V
Sbjct: 739 CEAGLSTFLCMLPLIFVPTYAIV 761
>Z83239-8|CAH60787.1| 311|Caenorhabditis elegans Hypothetical
protein T09F5.16 protein.
Length = 311
Score = 27.9 bits (59), Expect = 2.2
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = -2
Query: 285 IKSVGAAVVLRRFFIEDRCLAGTEFFLFLLPLIEVGTYSVVDGATGNLSATVLNL 121
I+ V A +L FF G FF+FL+P++ + + +V G +++ +L L
Sbjct: 58 IQIVNAIYILYFFFTLFMAFFGATFFVFLIPVLLI-VFPLVTGLMHDVNEFLLGL 111
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = +2
Query: 155 APSTTEYVPTSISGSKKRKNSVPAKQRSSIKNRRNTTAAPTLLMVSDNTQDT 310
AP+TT PT+ + + +VP ++ TT PT + T T
Sbjct: 195 APTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTT 246
>AC006619-3|AAK68253.1| 943|Caenorhabditis elegans Hypothetical
protein C46C11.1 protein.
Length = 943
Score = 27.9 bits (59), Expect = 2.2
Identities = 17/51 (33%), Positives = 20/51 (39%)
Frame = +2
Query: 155 APSTTEYVPTSISGSKKRKNSVPAKQRSSIKNRRNTTAAPTLLMVSDNTQD 307
APST P +S S P + S+ TAA T DN QD
Sbjct: 751 APSTPLQQPKPLSHSSSMNGFNPPVHKRSLSQSLADTAASTAAYALDNLQD 801
>AC136145-1|AAN60521.2| 226|Caenorhabditis elegans Hypothetical
protein E_BE45912.2 protein.
Length = 226
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/58 (22%), Positives = 27/58 (46%)
Frame = -2
Query: 354 FFFKCTKFFIYSDIFVSCVLSLTIKSVGAAVVLRRFFIEDRCLAGTEFFLFLLPLIEV 181
+ + FF+Y+ IF C++ I S+ +++ L+ ++ +L LI V
Sbjct: 87 YSYDLASFFLYATIFCQCIIGWLIGSIVNKTKIKKSKYSKEILSRFDYIKWLFMLIIV 144
>AC006742-7|ABB51176.1| 1434|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 5
protein.
Length = 1434
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 134 VALKLPVAPSTTEYVPTSISGSKKRKNSVPAKQRSSIKNRRNTTAAP 274
VA + P+ VP+ ISG + + SV + + S++ +R T A P
Sbjct: 493 VAQESPILKRRNSLVPSRISGRQSTRRSVTSVR--SMRGKRKTRAIP 537
>AC006742-1|AAF60499.2| 1393|Caenorhabditis elegans Hypothetical
protein Y38C1AB.4 protein.
Length = 1393
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 134 VALKLPVAPSTTEYVPTSISGSKKRKNSVPAKQRSSIKNRRNTTAAP 274
VA + P+ VP+ ISG + + SV + + S++ +R T A P
Sbjct: 452 VAQESPILKRRNSLVPSRISGRQSTRRSVTSVR--SMRGKRKTRAIP 496
>Z81094-6|CAB03154.1| 666|Caenorhabditis elegans Hypothetical
protein F58G11.3a protein.
Length = 666
Score = 27.1 bits (57), Expect = 3.8
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +2
Query: 158 PSTTEYVPTSISGSKKRKNSVPAKQRSSIKNRRNTTAAPTLLMVSDNTQDTNMSE*IKNF 337
PST +P I S R P K+ IK +++ PT+ +NT+ + E +
Sbjct: 217 PSTASSIPIFILRSGSRS---PVKKHVQIKTSSSSSHMPTITEFMNNTKRMMVKE-LPAS 272
Query: 338 VHLKK 352
VHL +
Sbjct: 273 VHLSE 277
>Z74043-7|CAA98539.2| 705|Caenorhabditis elegans Hypothetical
protein T19B10.5 protein.
Length = 705
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +2
Query: 158 PSTTEYVPTSISGSKKRKNSVPAKQRSSIKNRRNTTAAPTLLMVSDNTQ 304
P T PTSI+ + +R S +KQ+ ++ +R + DN+Q
Sbjct: 351 PLGTISTPTSIATTPQRCTSTDSKQKHALPPQREIIEPDSTTCADDNSQ 399
>Z79759-1|CAB02138.2| 841|Caenorhabditis elegans Hypothetical
protein ZK858.1 protein.
Length = 841
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 158 PSTTEYVPTSISGSKKRKNSVPAKQRSSIKN 250
P + Y + + S K +N+ P +QR SI+N
Sbjct: 615 PPPSRYAAGTAAPSHKHRNAHPQRQRPSIRN 645
>Z66513-7|CAA91336.2| 289|Caenorhabditis elegans Hypothetical
protein F54D5.11 protein.
Length = 289
Score = 26.6 bits (56), Expect = 5.0
Identities = 22/87 (25%), Positives = 39/87 (44%)
Frame = +2
Query: 95 RDFITKNMAKFKTVALKLPVAPSTTEYVPTSISGSKKRKNSVPAKQRSSIKNRRNTTAAP 274
R K+ A V K AP++ + + +KK+K+S PA+ S + + N+ +
Sbjct: 9 RTAFQKHAATTMAVQNKPTTAPNSHTTYSSEAAKAKKKKSSGPAQNLSKLPDFNNSVSNA 68
Query: 275 TLLMVSDNTQDTNMSE*IKNFVHLKKK 355
L + TN S K ++KK+
Sbjct: 69 NAL-----SNATNFSTMAKIVDYMKKR 90
>Y08815-1|CAA70049.1| 289|Caenorhabditis elegans TFIIE-beta protein
protein.
Length = 289
Score = 26.6 bits (56), Expect = 5.0
Identities = 22/87 (25%), Positives = 39/87 (44%)
Frame = +2
Query: 95 RDFITKNMAKFKTVALKLPVAPSTTEYVPTSISGSKKRKNSVPAKQRSSIKNRRNTTAAP 274
R K+ A V K AP++ + + +KK+K+S PA+ S + + N+ +
Sbjct: 9 RTAFQKHAATTMAVQNKPTTAPNSHTTYSSEAAKAKKKKSSGPAQNLSKLPDFNNSVSNA 68
Query: 275 TLLMVSDNTQDTNMSE*IKNFVHLKKK 355
L + TN S K ++KK+
Sbjct: 69 NAL-----SNATNFSTMAKIVDYMKKR 90
>U88310-2|AAB42338.2| 635|Caenorhabditis elegans Hypothetical
protein C24G7.2 protein.
Length = 635
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 208 KKLSSGQTTIFYKKSPQHYCGSNTFNG 288
KKL + T+ K+ QH+C + T +G
Sbjct: 65 KKLRKLEGTVSIKRETQHFCETTTMHG 91
>AF153275-1|AAD54940.1| 301|Caenorhabditis elegans transcription
factor RUN protein.
Length = 301
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +2
Query: 140 LKLPVAP-STTEYVPTSISGSKKRKNSVPAKQRSSIKNRRNTTAAPTL 280
LK P +P S T+ TSI+ ++ SV +K+R ++ + +++PT+
Sbjct: 250 LKRPSSPRSITKSSETSINLIQETPESVESKRRRNVSITSSNSSSPTI 297
>AF003145-2|AAB57715.2| 301|Caenorhabditis elegans Runt related
protein 1 protein.
Length = 301
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +2
Query: 140 LKLPVAP-STTEYVPTSISGSKKRKNSVPAKQRSSIKNRRNTTAAPTL 280
LK P +P S T+ TSI+ ++ SV +K+R ++ + +++PT+
Sbjct: 250 LKRPSSPRSITKSSETSINLIQETPESVESKRRRNVSITSSNSSSPTI 297
>AB027412-1|BAA77765.1| 301|Caenorhabditis elegans RNT-1 protein.
Length = 301
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +2
Query: 140 LKLPVAP-STTEYVPTSISGSKKRKNSVPAKQRSSIKNRRNTTAAPTL 280
LK P +P S T+ TSI+ ++ SV +K+R ++ + +++PT+
Sbjct: 250 LKRPSSPRSITKSSETSINLIQETPESVESKRRRNVSITSSNSSSPTI 297
>Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical
protein B0379.7 protein.
Length = 409
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 155 APSTTEYVPTSISGSKKRKNSVPAKQRSSIKNRRN 259
AP++TE + KK K S K+ +S KN++N
Sbjct: 206 APASTESKKSKKIKKKKNKKSKDKKKSNSRKNKKN 240
>Z81495-11|CAN99657.1| 339|Caenorhabditis elegans Hypothetical
protein Y51H1A.1c protein.
Length = 339
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -1
Query: 316 HICILCIIANH*KCWSRSSVAAIFYRRSLF 227
H C++C A H +CW S RR F
Sbjct: 291 HRCLVCFSAFHVECWRTSGDCPKCVRRQNF 320
>Z81495-10|CAD57692.1| 480|Caenorhabditis elegans Hypothetical
protein Y51H1A.1b protein.
Length = 480
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -1
Query: 316 HICILCIIANH*KCWSRSSVAAIFYRRSLF 227
H C++C A H +CW S RR F
Sbjct: 432 HRCLVCFSAFHVECWRTSGDCPKCVRRQNF 461
>Z81495-9|CAB04064.1| 389|Caenorhabditis elegans Hypothetical
protein Y51H1A.1a protein.
Length = 389
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -1
Query: 316 HICILCIIANH*KCWSRSSVAAIFYRRSLF 227
H C++C A H +CW S RR F
Sbjct: 341 HRCLVCFSAFHVECWRTSGDCPKCVRRQNF 370
>U67953-4|AAL13329.1| 732|Caenorhabditis elegans Hypothetical
protein ZC13.3 protein.
Length = 732
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/66 (24%), Positives = 29/66 (43%)
Frame = +2
Query: 29 LNETFNNNVAPLLSSIYDEVLTRDFITKNMAKFKTVALKLPVAPSTTEYVPTSISGSKKR 208
L + N + + S + + R +KN ++ TV ++LP P TT + + S K
Sbjct: 638 LGSRYTNPMRTVSSFVQCPSILRSVTSKNAYRWNTVHIQLP--PGTTHFYLVAHSSEKSE 695
Query: 209 KNSVPA 226
+ A
Sbjct: 696 SRAAIA 701
>U41554-3|AAA83298.2| 745|Caenorhabditis elegans Nematode astacin
protease protein38 protein.
Length = 745
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/74 (21%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +2
Query: 68 SSIYDEVLTRDFITKNMAKFKTVALKL-PVAPSTTEYVPTSISGSKKRKNSVPAKQRSSI 244
++ Y + R K K + + L P+ S+T T++S + + +P + +
Sbjct: 523 TTTYTTAIPRRTAKKQFFTRKPITIPLTPLTSSSTTTESTTVSSTTQSTTWLPTEPSFAT 582
Query: 245 KNRRNTTAAPTLLM 286
TTA+PT+ +
Sbjct: 583 GETEITTASPTITL 596
>AL032644-11|CAN99705.1| 339|Caenorhabditis elegans Hypothetical
protein Y51H1A.1c protein.
Length = 339
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -1
Query: 316 HICILCIIANH*KCWSRSSVAAIFYRRSLF 227
H C++C A H +CW S RR F
Sbjct: 291 HRCLVCFSAFHVECWRTSGDCPKCVRRQNF 320
>AL032644-10|CAD57710.1| 480|Caenorhabditis elegans Hypothetical
protein Y51H1A.1b protein.
Length = 480
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -1
Query: 316 HICILCIIANH*KCWSRSSVAAIFYRRSLF 227
H C++C A H +CW S RR F
Sbjct: 432 HRCLVCFSAFHVECWRTSGDCPKCVRRQNF 461
>AL032644-9|CAA21673.1| 389|Caenorhabditis elegans Hypothetical
protein Y51H1A.1a protein.
Length = 389
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -1
Query: 316 HICILCIIANH*KCWSRSSVAAIFYRRSLF 227
H C++C A H +CW S RR F
Sbjct: 341 HRCLVCFSAFHVECWRTSGDCPKCVRRQNF 370
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 25.8 bits (54), Expect = 8.7
Identities = 21/77 (27%), Positives = 30/77 (38%)
Frame = +2
Query: 44 NNNVAPLLSSIYDEVLTRDFITKNMAKFKTVALKLPVAPSTTEYVPTSISGSKKRKNSVP 223
N+++ P +L D N ++ VA K P T V SG +KRK+
Sbjct: 2298 NDDLPPNAQVTGGRLLFTDLKEDNAGVYRCVA-KTKAGPLQTRTVLNVGSGKRKRKHLGN 2356
Query: 224 AKQRSSIKNRRNTTAAP 274
+ R RRN P
Sbjct: 2357 RRGRRLRHRRRNAQNGP 2373
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 25.8 bits (54), Expect = 8.7
Identities = 21/77 (27%), Positives = 30/77 (38%)
Frame = +2
Query: 44 NNNVAPLLSSIYDEVLTRDFITKNMAKFKTVALKLPVAPSTTEYVPTSISGSKKRKNSVP 223
N+++ P +L D N ++ VA K P T V SG +KRK+
Sbjct: 2204 NDDLPPNAQVTGGRLLFTDLKEDNAGVYRCVA-KTKAGPLQTRTVLNVGSGKRKRKHLGN 2262
Query: 224 AKQRSSIKNRRNTTAAP 274
+ R RRN P
Sbjct: 2263 RRGRRLRHRRRNAQNGP 2279
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 25.8 bits (54), Expect = 8.7
Identities = 21/77 (27%), Positives = 30/77 (38%)
Frame = +2
Query: 44 NNNVAPLLSSIYDEVLTRDFITKNMAKFKTVALKLPVAPSTTEYVPTSISGSKKRKNSVP 223
N+++ P +L D N ++ VA K P T V SG +KRK+
Sbjct: 2391 NDDLPPNAQVTGGRLLFTDLKEDNAGVYRCVA-KTKAGPLQTRTVLNVGSGKRKRKHLGN 2449
Query: 224 AKQRSSIKNRRNTTAAP 274
+ R RRN P
Sbjct: 2450 RRGRRLRHRRRNAQNGP 2466
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 25.8 bits (54), Expect = 8.7
Identities = 21/77 (27%), Positives = 30/77 (38%)
Frame = +2
Query: 44 NNNVAPLLSSIYDEVLTRDFITKNMAKFKTVALKLPVAPSTTEYVPTSISGSKKRKNSVP 223
N+++ P +L D N ++ VA K P T V SG +KRK+
Sbjct: 2298 NDDLPPNAQVTGGRLLFTDLKEDNAGVYRCVA-KTKAGPLQTRTVLNVGSGKRKRKHLGN 2356
Query: 224 AKQRSSIKNRRNTTAAP 274
+ R RRN P
Sbjct: 2357 RRGRRLRHRRRNAQNGP 2373
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 25.8 bits (54), Expect = 8.7
Identities = 21/77 (27%), Positives = 30/77 (38%)
Frame = +2
Query: 44 NNNVAPLLSSIYDEVLTRDFITKNMAKFKTVALKLPVAPSTTEYVPTSISGSKKRKNSVP 223
N+++ P +L D N ++ VA K P T V SG +KRK+
Sbjct: 2204 NDDLPPNAQVTGGRLLFTDLKEDNAGVYRCVA-KTKAGPLQTRTVLNVGSGKRKRKHLGN 2262
Query: 224 AKQRSSIKNRRNTTAAP 274
+ R RRN P
Sbjct: 2263 RRGRRLRHRRRNAQNGP 2279
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 25.8 bits (54), Expect = 8.7
Identities = 21/77 (27%), Positives = 30/77 (38%)
Frame = +2
Query: 44 NNNVAPLLSSIYDEVLTRDFITKNMAKFKTVALKLPVAPSTTEYVPTSISGSKKRKNSVP 223
N+++ P +L D N ++ VA K P T V SG +KRK+
Sbjct: 2391 NDDLPPNAQVTGGRLLFTDLKEDNAGVYRCVA-KTKAGPLQTRTVLNVGSGKRKRKHLGN 2449
Query: 224 AKQRSSIKNRRNTTAAP 274
+ R RRN P
Sbjct: 2450 RRGRRLRHRRRNAQNGP 2466
>Z81514-6|CAB62802.1| 712|Caenorhabditis elegans Hypothetical
protein F26F2.7 protein.
Length = 712
Score = 25.8 bits (54), Expect = 8.7
Identities = 15/58 (25%), Positives = 23/58 (39%)
Frame = +2
Query: 149 PVAPSTTEYVPTSISGSKKRKNSVPAKQRSSIKNRRNTTAAPTLLMVSDNTQDTNMSE 322
P APS + +N+ + + ++ TTAAP S NT T+ E
Sbjct: 637 PPAPSMDQDPQLDTEDPVVTENNTNSNSEQASPVKKKTTAAPVTSSASTNTNATSSDE 694
>Z77660-2|CAB01176.1| 361|Caenorhabditis elegans Hypothetical
protein F38H4.2 protein.
Length = 361
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -1
Query: 172 FCSRRCNGQLERYRLKFSHIFSDEIAR*HFVVN 74
FCS+R ++ +LKF H D + + ++N
Sbjct: 35 FCSKRTKHIVQSLKLKFEHFKMDLLGKTKLMIN 67
>U80842-13|AAB37943.1| 208|Caenorhabditis elegans Hypothetical
protein ZC239.2 protein.
Length = 208
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 179 PTSISGSKKRKNSVPAKQRSSIKNRRNTTAAPTLLMVSDNTQ 304
PT++S SK +N+ P + + T +P +L DN +
Sbjct: 92 PTTVSLSKIEQNATPPTIGDPVTSSSGDTDSPQILEQPDNNE 133
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 25.8 bits (54), Expect = 8.7
Identities = 21/77 (27%), Positives = 30/77 (38%)
Frame = +2
Query: 44 NNNVAPLLSSIYDEVLTRDFITKNMAKFKTVALKLPVAPSTTEYVPTSISGSKKRKNSVP 223
N+++ P +L D N ++ VA K P T V SG +KRK+
Sbjct: 2390 NDDLPPNAQVTGGRLLFTDLKEDNAGVYRCVA-KTKAGPLQTRTVLNVGSGKRKRKHLGN 2448
Query: 224 AKQRSSIKNRRNTTAAP 274
+ R RRN P
Sbjct: 2449 RRGRRLRHRRRNAQNGP 2465
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,720,381
Number of Sequences: 27780
Number of extensions: 147329
Number of successful extensions: 568
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 567
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 471339352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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