Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1d24
(665 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_02_0007 + 10132380-10133201 37 0.013
07_01_0479 + 3606663-3607448 36 0.022
07_03_1067 + 23728642-23728690,23728832-23729010 36 0.029
09_01_0165 - 2436769-2437442,2438159-2438224,2438318-2438415,243... 35 0.067
04_03_0742 + 19200045-19200053,19200158-19200437,19201331-192015... 33 0.20
08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983 29 0.25
09_04_0684 - 19442335-19442990,19443774-19443839,19443935-194440... 32 0.47
05_01_0142 - 940421-940701,941262-941574 32 0.47
04_03_0904 + 20717005-20718087 32 0.47
03_06_0471 + 34169562-34169892,34170121-34170347 32 0.47
11_06_0610 - 25449085-25453284 31 0.62
05_04_0419 + 21103418-21103597,21103768-21103931,21104420-21104846 31 0.62
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 31 0.62
08_01_0178 - 1509100-1511214 31 0.82
06_03_0874 - 25580417-25580419,25580504-25580604,25580828-255814... 31 0.82
02_05_0970 - 33179180-33179210,33179297-33179441,33180307-331803... 31 0.82
02_02_0119 + 6978697-6979045,6979519-6979581,6979757-6979866,697... 31 0.82
01_01_0907 + 7128397-7128497,7129944-7130022,7130470-7130568,713... 31 0.82
04_04_0435 - 25170348-25170593,25170989-25171189,25171580-251717... 31 1.1
04_01_0453 + 5869627-5870232,5870383-5870897,5870964-5871600 31 1.1
12_02_1174 - 26696869-26698191 30 1.4
12_02_1052 - 25698263-25698394,25698587-25698679,25698945-256989... 30 1.4
07_03_1160 - 24430240-24431268 30 1.4
02_05_0700 + 31018480-31019832 30 1.4
06_02_0206 + 13005863-13005966,13006918-13007080,13008534-130086... 30 1.9
09_01_0079 - 1159963-1160211,1160303-1160509,1160631-1160801,116... 29 2.5
05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724 29 2.5
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 29 2.5
09_04_0424 + 17444261-17444665,17445974-17446367,17447367-174474... 29 3.3
07_03_1546 + 27602598-27602917,27602995-27603052,27603130-276032... 29 3.3
07_03_1315 - 25722757-25722876,25722972-25723328,25723924-257245... 29 3.3
01_06_1607 + 38605100-38605364,38605415-38605722,38606213-38606977 29 3.3
06_03_1310 + 29238644-29240260 25 3.9
09_06_0028 + 20328599-20328821,20330659-20330735,20330806-203309... 29 4.4
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 4.4
04_01_0077 - 873711-874091,874569-874805 29 4.4
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 29 4.4
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647 29 4.4
05_05_0173 + 22956927-22958615 28 5.8
05_04_0035 + 17378541-17381276 28 5.8
12_02_0634 + 21416205-21416954 28 7.7
12_02_0046 + 12830974-12832386 28 7.7
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 28 7.7
06_02_0120 + 12055076-12055175,12055322-12055725 28 7.7
03_05_1125 + 30576951-30577010,30577163-30577285,30577393-305775... 28 7.7
03_05_0349 + 23356871-23356907,23356995-23357063,23357236-233574... 28 7.7
03_02_0402 - 8151448-8151669,8151916-8152417,8154537-8155105 28 7.7
03_01_0164 - 1326002-1326409,1326410-1326428,1326523-1326647,132... 28 7.7
01_03_0145 - 13116302-13116958,13117365-13117430,13117786-131180... 28 7.7
>01_02_0007 + 10132380-10133201
Length = 273
Score = 37.1 bits (82), Expect = 0.013
Identities = 26/61 (42%), Positives = 31/61 (50%)
Frame = +3
Query: 258 PLPGMQHGFQPGFQPGYQPGFAPGYPQPSGYPVPVMQQPGPQAPGGWMNMPQGLSNCPRG 437
PLPG Q QPG QP P P P P+ P+P QP P AP + +PQ N P+
Sbjct: 98 PLPGPQPLPQPGPQPNPNPQPLP-QPNPNPQPLP---QPDPNAPP--LPLPQPNPNNPQP 151
Query: 438 L 440
L
Sbjct: 152 L 152
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/44 (50%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 255 QPLPGMQHGFQPGFQPGYQPGFAPGYPQPSGYPVPVMQ-QPGPQ 383
QPLP Q QP PG QP PG PQP+ P P+ Q P PQ
Sbjct: 85 QPLPQPQPQPQPLPLPGPQPLPQPG-PQPNPNPQPLPQPNPNPQ 127
>07_01_0479 + 3606663-3607448
Length = 261
Score = 36.3 bits (80), Expect = 0.022
Identities = 19/43 (44%), Positives = 20/43 (46%)
Frame = +3
Query: 285 QPGFQPGYQPGFAPGYPQPSGYPVPVMQQPGPQAPGGWMNMPQ 413
+PG G PG PG P P P PGPQ PG N PQ
Sbjct: 221 RPGMPGGPPPGMRPGMPPPPFRPGMPPPPPGPQQPG--QNPPQ 261
Score = 35.5 bits (78), Expect = 0.038
Identities = 21/46 (45%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +3
Query: 255 QPLPGMQHGFQPGFQPGY-QPGFAPGYPQPSGYPVPVMQQPGPQAP 389
Q PGM G PG +PG P F PG P P P QQPG P
Sbjct: 219 QVRPGMPGGPPPGMRPGMPPPPFRPGMPPPP----PGPQQPGQNPP 260
>07_03_1067 + 23728642-23728690,23728832-23729010
Length = 75
Score = 35.9 bits (79), Expect = 0.029
Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = +3
Query: 255 QPLPGMQHGFQPGFQP-GYQP--GFAP-GYPQPSGYPVPVMQQPGPQ 383
Q PG PG+ P GY P G+ P GYP GYP P Q P Q
Sbjct: 16 QGYPGKDGYPPPGYPPAGYPPAQGYPPAGYPPQQGYPPPYAQPPPQQ 62
Score = 31.9 bits (69), Expect = 0.47
Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 8/48 (16%)
Frame = +3
Query: 279 GFQP-GFQP--GYQP-GFAP--GYPQPSGYPVPVMQQ--PGPQAPGGW 398
G+ P G+ P GY P G+ P GYP P P P QQ GP GW
Sbjct: 28 GYPPAGYPPAQGYPPAGYPPQQGYPPPYAQPPPQQQQHSSGPSFMEGW 75
>09_01_0165 -
2436769-2437442,2438159-2438224,2438318-2438415,
2439856-2440214
Length = 398
Score = 34.7 bits (76), Expect = 0.067
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +3
Query: 264 PGMQHGFQPGFQPGYQPGFAPGYPQP--SGYPVPVMQQPGPQAPGGWMNMPQGLSNCPRG 437
PG Q G PG+ G P + G P P +G PV PG Q GG + QG N G
Sbjct: 326 PGYQGG-GPGYHGGNPPPYQAGNPPPYQAGNPVFAGGAPGYQGQGGNPSYQQGSDNYNAG 384
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +3
Query: 261 LPGMQHGFQPGFQPGYQPGFAPGYPQPSGYP--VPVMQQPGPQAPGG 395
+PG Q G PG+Q G Q P P PS Y P Q GP GG
Sbjct: 293 VPGYQ-GRAPGYQGGNQEYRGPPPPPPSAYQGNNPGYQGGGPGYHGG 338
>04_03_0742 +
19200045-19200053,19200158-19200437,19201331-19201545,
19201705-19201792,19202277-19202842
Length = 385
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Frame = +3
Query: 264 PGMQHGFQPGFQPGYQPGFAPGYP----QPSGYPVPVMQQPGPQA 386
PG + + P + P Y P + P YP PS +P + P A
Sbjct: 337 PGPGYAYPPPYPPSYPPPYQPSYPPYPSHPSHHPSQIFSDENPNA 381
>08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983
Length = 145
Score = 29.1 bits (62), Expect(2) = 0.25
Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = +3
Query: 108 YSPN-FPASHGYVPPPEGEKP 167
Y P +P+SHG PPP+G P
Sbjct: 60 YPPQGYPSSHGVYPPPQGPYP 80
Score = 22.6 bits (46), Expect(2) = 0.25
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +3
Query: 258 PLPGMQHGFQPGFQPGYQPGFAPGYPQP 341
P P PG+Q + G P YP P
Sbjct: 78 PYPPPHQPPPPGYQGYFNQGQQPYYPPP 105
>09_04_0684 -
19442335-19442990,19443774-19443839,19443935-19444032,
19444787-19445157
Length = 396
Score = 31.9 bits (69), Expect = 0.47
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +3
Query: 264 PGMQHGFQPGFQPGYQPGFAPGYPQPSGYP 353
PG Q G P +Q G PG+APGY G P
Sbjct: 342 PGYQGGNPPPYQGG-NPGYAPGYHGQGGNP 370
>05_01_0142 - 940421-940701,941262-941574
Length = 197
Score = 31.9 bits (69), Expect = 0.47
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +3
Query: 252 AQPLPGMQHGFQPGFQPGYQPGFAP--GYPQPSGYPVP-VMQQPGPQAPGGW 398
A P P + PG P + P GYPQP GYP P Q G P G+
Sbjct: 46 AYPPPPGAYPPPPGAYPPPPGAYPPQHGYPQPGGYPPPGGYPQHGGYPPAGY 97
Score = 28.7 bits (61), Expect = 4.4
Identities = 21/46 (45%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Frame = +3
Query: 276 HGFQP--GFQP-GYQPGFAPG-YPQPSG-YPVPVMQQPGPQAPGGW 398
HG+ P G+ P GY P PG YP P G YP P P P PG +
Sbjct: 27 HGYPPHQGYPPQGYPP--PPGAYPPPPGAYPPPPGAYPPP--PGAY 68
>04_03_0904 + 20717005-20718087
Length = 360
Score = 31.9 bits (69), Expect = 0.47
Identities = 25/105 (23%), Positives = 35/105 (33%)
Frame = +3
Query: 99 PTPYSPNFPASHGYVPPPEGEKPNESYXXXXXXXXXXXXXXXXXXXXXXXXAQPLPGMQH 278
PTPY+P P Y P P+ P +Y P P +
Sbjct: 206 PTPYTPT-PTPPSYKPQPKPNPP-PTYKPQPKPNPPPTYKPAPPTYKPQPKPNPPPTYKP 263
Query: 279 GFQPGFQPGYQPGFAPGYPQPSGYPVPVMQQPGPQAPGGWMNMPQ 413
+P P P + P P+P+ P P P P P + P+
Sbjct: 264 QPKPTPTPYTPPTYKP-QPKPTPTPTPYTPTPKPNPPPTYKPQPK 307
>03_06_0471 + 34169562-34169892,34170121-34170347
Length = 185
Score = 31.9 bits (69), Expect = 0.47
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +3
Query: 291 GFQPGYQPGFAPGYPQPSGYPVPVMQQPGPQAPGGWMNMPQG 416
GF Y G+ YP GYP Q P PGG+ + P G
Sbjct: 16 GFHGAYPSGYPGAYPLMQGYPNSPGQYP---TPGGYPSAPPG 54
Score = 31.9 bits (69), Expect = 0.47
Identities = 20/45 (44%), Positives = 23/45 (51%)
Frame = +3
Query: 264 PGMQHGFQPGFQPGYQPGFAPGYPQPSGYPVPVMQQPGPQAPGGW 398
PG Q + P P Q G+ PG PSGYP QQPG P G+
Sbjct: 63 PGAQ--YPPSGYPPSQGGYPPGAYPPSGYP----QQPG-YPPAGY 100
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 6/46 (13%)
Frame = +3
Query: 276 HGFQPGFQPGYQP---GF--APG-YPQPSGYPVPVMQQPGPQAPGG 395
HG P PG P G+ +PG YP P GYP PG P G
Sbjct: 18 HGAYPSGYPGAYPLMQGYPNSPGQYPTPGGYP---SAPPGQYPPAG 60
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 31.5 bits (68), Expect = 0.62
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 78 ELTMSHKPTPYSPNFPASHGYVPPPEGEKPNE 173
E + +++ P +P+ P SHG PPPE E P E
Sbjct: 440 EKSPAYEEPPAAPSTPTSHGP-PPPEEESPEE 470
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 99 PTPYSPNFPASHGYVPPPEGEKP 167
PT YSP PA+ PPPEG+ P
Sbjct: 536 PTEYSP--PATPESSPPPEGKSP 556
>05_04_0419 + 21103418-21103597,21103768-21103931,21104420-21104846
Length = 256
Score = 31.5 bits (68), Expect = 0.62
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = +3
Query: 276 HGFQPGFQPGYQ-PGFAPGYPQPSGYPVPVMQQPGPQAPGGWMNMPQGLSNCPRG 437
HGF+P P Q P P YP P P P + G + Q L+ P+G
Sbjct: 198 HGFRPPMPPNPQVPEPLPNYPPPPYSPAPAPAPAPAEGNGNQLAPDQQLAPHPQG 252
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 31.5 bits (68), Expect = 0.62
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Frame = +3
Query: 255 QPLPGMQHGFQ--PGFQPGYQPGFAPGYPQPSGYPVPVMQQPGPQAPGGWMNMPQGLSNC 428
QP+P +G P P Y P P Y S YP QP P P + Q L+N
Sbjct: 510 QPVPAPVYGTSGAPNAPPMYPP---PPYGYASYYPSVTPVQPPPPPPPAGADPSQSLANA 566
Query: 429 P 431
P
Sbjct: 567 P 567
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +3
Query: 288 PGFQPGYQPGFAPGYPQPSGYPVPVMQQPGPQAPGGWMNMPQGLSNCPRGL 440
PG P APG P Y V P P P G G N P G+
Sbjct: 450 PGSSMYNPPPPAPGQATPPPYGVQYAPPPAPIPPPGTAPSTDGAQNYPPGV 500
>08_01_0178 - 1509100-1511214
Length = 704
Score = 31.1 bits (67), Expect = 0.82
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +2
Query: 206 WPTTHSYATPRPTSWGTTPSGHAAWVPARISTWLSTRIC 322
W S P+P TTP G P R+ W S C
Sbjct: 49 WTNAPSNPPPQPAGGSTTPFGQTTGFPMRVRPWSSCDKC 87
>06_03_0874 -
25580417-25580419,25580504-25580604,25580828-25581411,
25581523-25581594,25581667-25581793,25583412-25583516,
25583643-25583676
Length = 341
Score = 31.1 bits (67), Expect = 0.82
Identities = 22/86 (25%), Positives = 28/86 (32%), Gaps = 4/86 (4%)
Frame = +3
Query: 90 SHKPTPYSPNFPASHGYVPPPEGE----KPNESYXXXXXXXXXXXXXXXXXXXXXXXXAQ 257
++ P PY P P Y P P+GE +P Q
Sbjct: 226 TYPPQPYPPQ-PQGQTYPPQPQGETYQPQPQRETYPPQPQVQPYPPKPQGQPYPPQPQGQ 284
Query: 258 PLPGMQHGFQPGFQPGYQPGFAPGYP 335
P P +G P QP + PGYP
Sbjct: 285 PYPPQPYGQTYPPPPKGQPTYPPGYP 310
>02_05_0970 -
33179180-33179210,33179297-33179441,33180307-33180362,
33180650-33180691,33180814-33180866,33181059-33181490,
33181630-33181707,33181785-33181870,33183588-33183689,
33183754-33183960,33184976-33185336,33185463-33185626,
33185709-33185817,33186468-33186485
Length = 627
Score = 31.1 bits (67), Expect = 0.82
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +3
Query: 300 PGYQPGFAPGYPQPSGYPVPVMQQPGPQAPGGWM--NMPQGLSNCPRG 437
P F+ SG P +QQPG PG + N+P G+S P G
Sbjct: 54 PNMPGSFSQRNAAMSGLPSSGVQQPGGSMPGRFASNNLPVGMSQIPHG 101
>02_02_0119 +
6978697-6979045,6979519-6979581,6979757-6979866,
6979969-6980154,6980266-6980361,6980493-6980564,
6980798-6980909,6982448-6982534,6982680-6983872
Length = 755
Score = 31.1 bits (67), Expect = 0.82
Identities = 18/40 (45%), Positives = 18/40 (45%)
Frame = +3
Query: 276 HGFQPGFQPGYQPGFAPGYPQPSGYPVPVMQQPGPQAPGG 395
HG P QPGY GY QP YP Q PQ P G
Sbjct: 394 HGGAPMQQPGY------GYMQPGAYPGAPPQYGAPQQPYG 427
Score = 27.9 bits (59), Expect = 7.7
Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Frame = +3
Query: 258 PLPGMQHGFQPGFQPGYQPGFAPGYPQPSGYP---VPVMQQPGP-QAPGGW 398
P P +G QP Q GY G PQ P P Q P P APGG+
Sbjct: 610 PPPQTGYGTQPQPQGGYSQGSYGAPPQGQKAPPNTSPYGQAPPPGSAPGGY 660
>01_01_0907 +
7128397-7128497,7129944-7130022,7130470-7130568,
7130654-7130767,7130960-7131102,7131716-7131797,
7132425-7132510,7132879-7133112,7134684-7135162,
7135309-7136027
Length = 711
Score = 31.1 bits (67), Expect = 0.82
Identities = 28/93 (30%), Positives = 37/93 (39%), Gaps = 1/93 (1%)
Frame = +3
Query: 288 PGFQPGYQ-PGFAPGYPQPSGYPVPVMQQPGPQAPGGWMNMPQGLSNCPRGLEYLSMIDQ 464
P PG Q PG P P P PV + QP + MPQ P+ +Y +
Sbjct: 575 PHSMPGMQFPGMQPS-PMPGAQPVMMYAQPMMMPGMQFAAMPQPRMYGPQMSQY-----R 628
Query: 465 LIMHQKVELLEAFVGFETNNKYTVMNSVGQKVY 563
L+ Q + G T Y MN + QK+Y
Sbjct: 629 LVQQQAAQYYSNSQGRPT--YYAGMNDLSQKMY 659
>04_04_0435 -
25170348-25170593,25170989-25171189,25171580-25171756,
25172284-25172418,25173131-25173262,25173292-25173369,
25173452-25174108,25174210-25174328,25175897-25176173
Length = 673
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/39 (48%), Positives = 20/39 (51%)
Frame = +3
Query: 273 QHGFQPGFQPGYQPGFAPGYPQPSGYPVPVMQQPGPQAP 389
Q GF GFQ PG PG Y VPV+QQ G Q P
Sbjct: 466 QPGF--GFQQQLVPGMRPGGAHMPNYFVPVVQQ-GQQGP 501
>04_01_0453 + 5869627-5870232,5870383-5870897,5870964-5871600
Length = 585
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/55 (40%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Frame = +3
Query: 267 GMQHGFQPGFQPGYQPGFAP-GYPQPSGYPVPVMQQPGPQ----APGGWMNMPQG 416
G GF PGF G Q G AP G + G P +PGP+ GGW N G
Sbjct: 19 GFARGFHPGFVVGNQHGGAPGGRGRGRGRGRPT-GRPGPRHEFSHAGGWNNFGGG 72
>12_02_1174 - 26696869-26698191
Length = 440
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +3
Query: 255 QPLPGMQHGFQPGFQPGYQPGFAPGYPQPSGYPVPVMQQPGPQAP 389
QP P +Q P P P P QP P P + P P P
Sbjct: 180 QPPPSLQPPSPPPPPPTRPPSVKPPVVQPKPQPPPTLPPPSPPPP 224
>12_02_1052 -
25698263-25698394,25698587-25698679,25698945-25698995,
25699074-25699258,25699361-25699407,25699704-25699918
Length = 240
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +2
Query: 143 TSTRRRKAK*KLPHASSKRLSWPTTHSYATPRPTSWGTTPS 265
TS+ RR + ASS+R P+ S TPRP+ +G TPS
Sbjct: 46 TSSTRRSRRPMRASASSRRRRTPS--STWTPRPSRYGGTPS 84
>07_03_1160 - 24430240-24431268
Length = 342
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +3
Query: 255 QPLPGMQHGFQPGFQPGYQPGFAPGYPQPSGYPVPVMQQPGPQAP 389
QP PG+ P P +P P P+P G P+P + QP P P
Sbjct: 67 QPTPGVPPLPNPDVPPMNKPDVPP-MPKPDGPPIPPV-QPCPDQP 109
>02_05_0700 + 31018480-31019832
Length = 450
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Frame = +3
Query: 255 QPLPGMQHGFQPGFQPGYQ-PGFA-PGYP----QPSGYPVPVMQQPGPQAPG 392
QPLPG QP PG PG + PG P +P G P+P PG PG
Sbjct: 54 QPLPGQSLPGQP--LPGQPLPGQSLPGQPLVGEKPPGQPLPGQPLPGQSLPG 103
Score = 28.3 bits (60), Expect = 5.8
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = +3
Query: 255 QPLPGMQHGFQP-GFQP--GYQPGFAPGYPQPSGYPVPVMQQPGPQAPGGWMNMPQGLSN 425
QPLPG QP QP G +P PG P G P+ + PG G ++
Sbjct: 94 QPLPGQSLPGQPLPGQPLVGEKP---PGQPLVPGQPLVGEKPPGQPLGGDKLSPDYYAQT 150
Query: 426 CPRGLEYLSMIDQ 464
CPR ++ + Q
Sbjct: 151 CPRAERIVAEVVQ 163
>06_02_0206 +
13005863-13005966,13006918-13007080,13008534-13008632,
13008704-13008817,13009094-13009254,13009746-13009827,
13009972-13010057,13011563-13011742,13011913-13012424,
13012844-13013478
Length = 711
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +3
Query: 285 QPGFQPGYQPGFAPGYPQPSGYPVPVMQQPGPQAPGGWMNMPQGLSNCPRGLEY 446
QP +QPG G PSG + QP PG + L+ P G+++
Sbjct: 518 QPAESDQFQPGQPRGLAMPSGQIGGIQSQPVQVQPGQVAPLQPMLTGQPTGMQF 571
>09_01_0079 -
1159963-1160211,1160303-1160509,1160631-1160801,
1161732-1161869,1162184-1162273,1162354-1162431,
1162510-1163166,1163245-1163363,1164305-1164584
Length = 662
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +3
Query: 255 QPLPGM---QHGFQPGFQPGYQPGFAPGYPQPSGYPVPVMQQ-PGPQAPGG 395
QP P Q GF GFQ PG PG + +P++QQ PQ P G
Sbjct: 445 QPPPAFINTQPGF--GFQQPLMPGMRPGAGPMPNFIMPMVQQGQQPQRPAG 493
>05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724
Length = 574
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/99 (23%), Positives = 31/99 (31%)
Frame = +3
Query: 54 IYEKGYETELTMSHKPTPYSPNFPASHGYVPPPEGEKPNESYXXXXXXXXXXXXXXXXXX 233
++++ E P Y PN YVPPP G P
Sbjct: 381 VHQQPEEVAAPYGPPPQSYPPNVRLPSPYVPPPSGPAP------------------PFYG 422
Query: 234 XXXXXXAQPLPGMQHGFQPGFQPGYQPGFAPGYPQPSGY 350
P G P + GY+P G+P+P GY
Sbjct: 423 PNPGMYEPPAVRPNSGPPPSYNTGYKPQGGGGFPEPYGY 461
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 29.5 bits (63), Expect = 2.5
Identities = 28/65 (43%), Positives = 28/65 (43%), Gaps = 11/65 (16%)
Frame = +3
Query: 252 AQPLPGMQHGFQ----PGFQPGYQPGFAPGYPQPS------GYPVPVMQQPGPQAP-GGW 398
A PL G HG Q PG PG QP PG P PS MQQ PQ P
Sbjct: 488 AMPLDGSDHGEQRPSIPGLPPG-QPPLPPG-PHPSLLAGGQQQQYQQMQQQHPQFPRPPP 545
Query: 399 MNMPQ 413
NMPQ
Sbjct: 546 PNMPQ 550
>09_04_0424 +
17444261-17444665,17445974-17446367,17447367-17447425,
17447507-17447637,17447737-17447833,17447936-17448100
Length = 416
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/41 (43%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Frame = +3
Query: 282 FQPGFQPGYQPGFAPGYPQPSGYPVPV---MQQPGPQAPGG 395
F P F P + G P PQP P PV M P P A GG
Sbjct: 63 FAPHFVPFHAVG-PPPPPQPRAAPPPVAVAMGSPAPHAQGG 102
>07_03_1546 + 27602598-27602917,27602995-27603052,27603130-27603252,
27603896-27603992,27604095-27604131,27604244-27604349,
27604547-27604604,27604705-27604802,27604911-27605030,
27605622-27605667,27606336-27606522,27606747-27607263,
27607361-27607453,27608101-27608286,27608364-27608574,
27609263-27609387,27609518-27609664,27610114-27610236,
27610445-27610799,27611076-27611305,27611785-27611877
Length = 1109
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 6/41 (14%)
Frame = +3
Query: 282 FQPGFQPGY--QPGFAPGYP----QPSGYPVPVMQQPGPQA 386
F P PG+ +PG +P P Q G P PV+ P P A
Sbjct: 951 FMPSNNPGFVQRPGLSPVQPSSPTQAQGQPQPVVAPPAPPA 991
>07_03_1315 -
25722757-25722876,25722972-25723328,25723924-25724500,
25724577-25725265,25725487-25725822,25726190-25726527,
25726619-25726746,25726906-25727030,25727547-25727589,
25727714-25727802,25728396-25728511,25729157-25729276,
25729752-25729794
Length = 1026
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 196 AAILAHHPLLCHTPAYILGHNPF 264
A +LAH L C+TP ++ G PF
Sbjct: 476 AEVLAHGSLRCYTPVHLSGRVPF 498
>01_06_1607 + 38605100-38605364,38605415-38605722,38606213-38606977
Length = 445
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +2
Query: 182 HASSKRLSWPTTHSYATPRPTSWGTTPSGHAAWVPARISTWLSTRI 319
H S+ L PTT S P P GTT + AA +P ++ + S RI
Sbjct: 379 HNYSQFLHLPTTPSSHQPTPAPLGTTTAAAAATLPMSLAAF-SDRI 423
>06_03_1310 + 29238644-29240260
Length = 538
Score = 25.0 bits (52), Expect(2) = 3.9
Identities = 15/43 (34%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Frame = +3
Query: 264 PGMQHGFQPGFQPGYQPGFAPGYP-QPSGYPVPVMQQPGPQAP 389
P HG P P PGY P P P PG AP
Sbjct: 430 PPSSHGASPPSSSSSPPTEHPGYVLPPLTPPPPTTTPPGHHAP 472
Score = 22.2 bits (45), Expect(2) = 3.9
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = +3
Query: 99 PTPYSPNFPA-SHGYVPPPE-GEKPNES 176
PTP P+ P SH PPP E P S
Sbjct: 396 PTPPPPSSPTPSHLPPPPPTYSESPKSS 423
>09_06_0028 +
20328599-20328821,20330659-20330735,20330806-20330968,
20331095-20331156,20331250-20331328,20331818-20331898,
20332068-20332216,20332254-20332319,20332495-20332643,
20332722-20332761,20333001-20333015
Length = 367
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 297 QPGYQPGFAPGYPQPSGYPVPVMQQPG--PQAPGGWMNMPQGLSN 425
Q GYQP AP P + P+P P Q P + +MP G N
Sbjct: 39 QAGYQPAVAPVAPPMAAPPLPAGPPPSFKRQRP-EYFDMPSGQGN 82
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = +3
Query: 255 QPLPGMQHGFQPGFQPGYQPGFAPGYPQPSGYPVPVMQQPGPQAPG 392
QP P +G P QP Y P P G P P + P P PG
Sbjct: 21 QPPPMNPYGPPPPQQPAYGH-----MPPPQGAPPPFLAPPPPPPPG 61
>04_01_0077 - 873711-874091,874569-874805
Length = 205
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -3
Query: 582 HYPQSHNKLFDQHCS*LCICCLSRTQQKLLIIQLSDALSVGQSWKGIPNL 433
H PQ+HN +F Q CS L Q +LL +QLS + ++ G+ L
Sbjct: 119 HNPQNHNAMFIQACSNKAHSAL---QAELLALQLSLETDMCLNFSGVTYL 165
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = +3
Query: 285 QPGFQPGYQPGFAPGYPQPS--GYPVPVMQQPGPQAPGGWMNMPQGLSNCPRG 437
+P PG P + G P+P P P Q P P P M MP + P G
Sbjct: 249 KPPAAPGTLPNGSGGPPRPPPPQVPPPPPQAPPPPPPNAPMGMPPRIPPPPVG 301
>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
Length = 252
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 282 FQPGFQPGYQPGFAPGYPQPSGYPVPVMQQPGPQ 383
F G +PG +P P P+P P P +PGP+
Sbjct: 153 FHHGPKPGPKPKPKPSPPKPKPGPKPKPPKPGPK 186
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Frame = +3
Query: 297 QPGYQPGFAPGYPQPSGYPVPVMQQPGPQ----APGGWMNMPQGLSNCPRGLE 443
+PG +P P P+P P P +PGP+ P W +P CP G +
Sbjct: 191 KPGPKP--KPKPPKPGPKPKPKPPKPGPKPKPGPPQPWWPIPFPKPPCPPGAD 241
>05_05_0173 + 22956927-22958615
Length = 562
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/19 (57%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = +3
Query: 99 PTPYSPNFPASH-GYVPPP 152
P PY P+ P +H YVPPP
Sbjct: 83 PEPYDPSAPEAHPPYVPPP 101
>05_04_0035 + 17378541-17381276
Length = 911
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Frame = +3
Query: 309 QPGFAPGYPQPSGYPVPVMQQP---GPQA 386
QPG+ +P +G+ P +QQP GPQ+
Sbjct: 746 QPGYGTSHPWHTGFNAPQVQQPSYGGPQS 774
>12_02_0634 + 21416205-21416954
Length = 249
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 251 PRM*AGVWHRSGWWARIAALRMHG 180
P M A W R WW R ALR G
Sbjct: 97 PGMRAASWSRGRWWRRRPALRGRG 120
>12_02_0046 + 12830974-12832386
Length = 470
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 102 TPYSPNFPASHGYVPPPEGEKPNESY 179
TP SP+ P + PPP + P +SY
Sbjct: 342 TPPSPHAPRHDPFEPPPSPDPPIQSY 367
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = +3
Query: 288 PGFQPGYQPGFAPGYPQPSGYPVPVMQQPGPQAPGGWMNMPQGLSNCPRGLEY 446
P P P P P P P P+ QP P P + P L P EY
Sbjct: 1177 PSLPPPPPPPPLPSGPPPQPAPPPLPIQPPPIPPPPVPSSPSSLGYQPPAPEY 1229
>06_02_0120 + 12055076-12055175,12055322-12055725
Length = 167
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Frame = +3
Query: 267 GMQHG---FQPGFQPGY-QPGFAPGYPQPSGY 350
G +HG QP + GY QPG+ GY QP GY
Sbjct: 58 GYEHGGGYSQPRYGGGYGQPGYGGGYGQP-GY 88
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 5/32 (15%)
Frame = +3
Query: 252 AQPLPGMQHGFQPGF-----QPGYQPGFAPGY 332
+QP G +G QPG+ QPGY G+ PGY
Sbjct: 66 SQPRYGGGYG-QPGYGGGYGQPGYGSGYGPGY 96
>03_05_1125 +
30576951-30577010,30577163-30577285,30577393-30577552,
30577635-30577702,30577928-30578473,30578725-30579312,
30579392-30579604,30580227-30580388
Length = 639
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 306 YQPGFAPGYPQPSGYPVPVMQQPG 377
Y G+AP P PSG PVP + G
Sbjct: 145 YGYGYAPYGPYPSGSPVPTVGHDG 168
>03_05_0349 +
23356871-23356907,23356995-23357063,23357236-23357424,
23358148-23358249,23358451-23358582,23359499-23359638,
23360169-23360252,23360608-23360748,23361815-23361916,
23362239-23362409,23362452-23362571
Length = 428
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -3
Query: 450 KGIPNLEGSC*GLAAYSSNHLELVDLVVASLVPDIH*AEDIQEQILVDSQV 298
+G+P EG+ A S H+E+ +V +L D+ A+D +E +DS V
Sbjct: 58 EGVPGEEGTGVLHMAASHGHMEMCKYLVETLQVDVDDADD-KENFKIDSLV 107
>03_02_0402 - 8151448-8151669,8151916-8152417,8154537-8155105
Length = 430
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +3
Query: 294 FQPGYQPGFAPGYPQPSGYPVPVMQQPGPQAP 389
F P P PG+P SG P P QP P
Sbjct: 113 FPPSAHPQHYPGWPGVSGRPHPCGLQPAMPTP 144
>03_01_0164 -
1326002-1326409,1326410-1326428,1326523-1326647,
1327482-1327530,1328834-1328855,1328969-1329071
Length = 241
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/61 (31%), Positives = 23/61 (37%)
Frame = +3
Query: 255 QPLPGMQHGFQPGFQPGYQPGFAPGYPQPSGYPVPVMQQPGPQAPGGWMNMPQGLSNCPR 434
QP G +G P P G+ P P+GYP P P PQG P+
Sbjct: 179 QPAYGQPYGGYPPAPPAQ--GYPPAAYPPAGYPQGGAYPPPGSYPPPGSYPPQGSYPPPQ 236
Query: 435 G 437
G
Sbjct: 237 G 237
>01_03_0145 -
13116302-13116958,13117365-13117430,13117786-13118065,
13118283-13119028
Length = 582
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 45 RQLIYEKGYETELTMSHKPTPYSPNFPASHGYVPP 149
R+LI ++ + S +PYSPNFP+S + P
Sbjct: 280 RELIIFGNNQSPSSSSPALSPYSPNFPSSPNPISP 314
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,299,469
Number of Sequences: 37544
Number of extensions: 424222
Number of successful extensions: 1885
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1844
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -