Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1d18
         (670 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061544-1|AAL29092.1|  295|Drosophila melanogaster LP04475p pro...   268   3e-72
AE014297-1612|AAF54889.1|  295|Drosophila melanogaster CG8031-PA...   268   3e-72
BT003641-1|AAO39645.1|  434|Drosophila melanogaster AT14896p pro...    28   10.0 
AE014134-1662|AAF52791.1|  564|Drosophila melanogaster CG3841-PA...    28   10.0 

>AY061544-1|AAL29092.1|  295|Drosophila melanogaster LP04475p
           protein.
          Length = 295

 Score =  268 bits (658), Expect = 3e-72
 Identities = 128/186 (68%), Positives = 146/186 (78%)
 Frame = +3

Query: 111 MSCRQAYHAGCWYTENGSELSRQLDLWLSKADLTHGPARAIIAPHXXXXXXXXXXXXXXR 290
           MS R+A HAG WYT++G+ELSRQLD WL  ADL+HGPARAIIAPH              R
Sbjct: 1   MSARRATHAGSWYTDSGAELSRQLDRWLGAADLSHGPARAIIAPHAGYTYCGACAAFAYR 60

Query: 291 QVSPVVVKRIFILGPSHHVRIAGCALSSLDKYQTPLYDLTIDKQIYAELEATRQFDRMDE 470
           QVSPVVVKRIFILGPSHHVR+ GCALS   KY+TPLYDL ID QI +ELE T +F  MD 
Sbjct: 61  QVSPVVVKRIFILGPSHHVRLRGCALSVAKKYRTPLYDLKIDAQINSELEKTGKFSWMDM 120

Query: 471 QTDENEHSIEMHLPYIAKVMEEYKTSFTIIPILVGSLTPEKEAKYGAILAPYLAXPQNLL 650
           +TDE+EHSIEMHLPYIAKVME+YK  FTI+PILVGSL PE+EA+YG++L+ YL  P NL 
Sbjct: 121 KTDEDEHSIEMHLPYIAKVMEDYKDQFTIVPILVGSLNPEQEAQYGSLLSSYLMDPTNLF 180

Query: 651 VISSDF 668
           VISSDF
Sbjct: 181 VISSDF 186


>AE014297-1612|AAF54889.1|  295|Drosophila melanogaster CG8031-PA
           protein.
          Length = 295

 Score =  268 bits (658), Expect = 3e-72
 Identities = 128/186 (68%), Positives = 146/186 (78%)
 Frame = +3

Query: 111 MSCRQAYHAGCWYTENGSELSRQLDLWLSKADLTHGPARAIIAPHXXXXXXXXXXXXXXR 290
           MS R+A HAG WYT++G+ELSRQLD WL  ADL+HGPARAIIAPH              R
Sbjct: 1   MSARRATHAGSWYTDSGAELSRQLDRWLGAADLSHGPARAIIAPHAGYTYCGACAAFAYR 60

Query: 291 QVSPVVVKRIFILGPSHHVRIAGCALSSLDKYQTPLYDLTIDKQIYAELEATRQFDRMDE 470
           QVSPVVVKRIFILGPSHHVR+ GCALS   KY+TPLYDL ID QI +ELE T +F  MD 
Sbjct: 61  QVSPVVVKRIFILGPSHHVRLRGCALSVAKKYRTPLYDLKIDAQINSELEKTGKFSWMDM 120

Query: 471 QTDENEHSIEMHLPYIAKVMEEYKTSFTIIPILVGSLTPEKEAKYGAILAPYLAXPQNLL 650
           +TDE+EHSIEMHLPYIAKVME+YK  FTI+PILVGSL PE+EA+YG++L+ YL  P NL 
Sbjct: 121 KTDEDEHSIEMHLPYIAKVMEDYKDQFTIVPILVGSLNPEQEAQYGSLLSSYLMDPTNLF 180

Query: 651 VISSDF 668
           VISSDF
Sbjct: 181 VISSDF 186


>BT003641-1|AAO39645.1|  434|Drosophila melanogaster AT14896p
           protein.
          Length = 434

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 495 WSAHFHRSARPFYRIDVWPP 436
           W  HF ++  P    D+WPP
Sbjct: 350 WFTHFAKTGTPLNSTDIWPP 369


>AE014134-1662|AAF52791.1|  564|Drosophila melanogaster CG3841-PA
           protein.
          Length = 564

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 495 WSAHFHRSARPFYRIDVWPP 436
           W  HF ++  P    D+WPP
Sbjct: 480 WFTHFAKTGTPLNSTDIWPP 499


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,454,263
Number of Sequences: 53049
Number of extensions: 650637
Number of successful extensions: 1648
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1648
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)