Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1d18
(670 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64857-9|AAC25863.3| 302|Caenorhabditis elegans Hypothetical pr... 182 2e-46
U64857-8|AAM29667.1| 350|Caenorhabditis elegans Hypothetical pr... 182 2e-46
AF068719-3|AAM45352.1| 603|Caenorhabditis elegans Hypothetical ... 32 0.32
AF068719-2|AAC17783.1| 633|Caenorhabditis elegans Hypothetical ... 32 0.32
AF039712-3|AAK21400.3| 393|Caenorhabditis elegans Hypothetical ... 31 0.56
U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical pr... 28 5.2
U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z92847-6|CAB07423.1| 1076|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z73911-9|CAA98143.1| 1076|Caenorhabditis elegans Hypothetical pr... 28 6.9
>U64857-9|AAC25863.3| 302|Caenorhabditis elegans Hypothetical
protein C37C3.8a protein.
Length = 302
Score = 182 bits (443), Expect = 2e-46
Identities = 91/183 (49%), Positives = 116/183 (63%)
Frame = +3
Query: 120 RQAYHAGCWYTENGSELSRQLDLWLSKADLTHGPARAIIAPHXXXXXXXXXXXXXXRQVS 299
R A HAG WY N +L RQL WL A G ARA+I+PH +QV
Sbjct: 11 RSASHAGSWYNANQRDLDRQLTKWLDNAGPRIGTARALISPHAGYSYCGETAAYAFKQVV 70
Query: 300 PVVVKRIFILGPSHHVRIAGCALSSLDKYQTPLYDLTIDKQIYAELEATRQFDRMDEQTD 479
V+R+FILGPSH V + GCA+++ KY+TPL DL +D +I EL ATR FD MD + +
Sbjct: 71 SSAVERVFILGPSHVVALNGCAITTCSKYRTPLGDLIVDHKINEELRATRHFDLMDRRDE 130
Query: 480 ENEHSIEMHLPYIAKVMEEYKTSFTIIPILVGSLTPEKEAKYGAILAPYLAXPQNLLVIS 659
E+EHSIEM LP+IAKVM + +TI+P+LVGSL ++ YG I A Y+ P+NL VIS
Sbjct: 131 ESEHSIEMQLPFIAKVMGSKR--YTIVPVLVGSLPGSRQQTYGNIFAHYMEDPRNLFVIS 188
Query: 660 SDF 668
SDF
Sbjct: 189 SDF 191
>U64857-8|AAM29667.1| 350|Caenorhabditis elegans Hypothetical
protein C37C3.8b protein.
Length = 350
Score = 182 bits (443), Expect = 2e-46
Identities = 91/183 (49%), Positives = 116/183 (63%)
Frame = +3
Query: 120 RQAYHAGCWYTENGSELSRQLDLWLSKADLTHGPARAIIAPHXXXXXXXXXXXXXXRQVS 299
R A HAG WY N +L RQL WL A G ARA+I+PH +QV
Sbjct: 59 RSASHAGSWYNANQRDLDRQLTKWLDNAGPRIGTARALISPHAGYSYCGETAAYAFKQVV 118
Query: 300 PVVVKRIFILGPSHHVRIAGCALSSLDKYQTPLYDLTIDKQIYAELEATRQFDRMDEQTD 479
V+R+FILGPSH V + GCA+++ KY+TPL DL +D +I EL ATR FD MD + +
Sbjct: 119 SSAVERVFILGPSHVVALNGCAITTCSKYRTPLGDLIVDHKINEELRATRHFDLMDRRDE 178
Query: 480 ENEHSIEMHLPYIAKVMEEYKTSFTIIPILVGSLTPEKEAKYGAILAPYLAXPQNLLVIS 659
E+EHSIEM LP+IAKVM + +TI+P+LVGSL ++ YG I A Y+ P+NL VIS
Sbjct: 179 ESEHSIEMQLPFIAKVMGSKR--YTIVPVLVGSLPGSRQQTYGNIFAHYMEDPRNLFVIS 236
Query: 660 SDF 668
SDF
Sbjct: 237 SDF 239
>AF068719-3|AAM45352.1| 603|Caenorhabditis elegans Hypothetical
protein H14N18.4b protein.
Length = 603
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/59 (27%), Positives = 35/59 (59%)
Frame = +3
Query: 387 QTPLYDLTIDKQIYAELEATRQFDRMDEQTDENEHSIEMHLPYIAKVMEEYKTSFTIIP 563
QT + L ++ + A ++A R ++ +T E E ++ + L + ++E+YK +FT++P
Sbjct: 514 QTVIRTLLFNQTVKAAVDAPRFHNQYLPETTETEEAMPLALREV--LVEQYKQNFTVVP 570
>AF068719-2|AAC17783.1| 633|Caenorhabditis elegans Hypothetical
protein H14N18.4a protein.
Length = 633
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/59 (27%), Positives = 35/59 (59%)
Frame = +3
Query: 387 QTPLYDLTIDKQIYAELEATRQFDRMDEQTDENEHSIEMHLPYIAKVMEEYKTSFTIIP 563
QT + L ++ + A ++A R ++ +T E E ++ + L + ++E+YK +FT++P
Sbjct: 544 QTVIRTLLFNQTVKAAVDAPRFHNQYLPETTETEEAMPLALREV--LVEQYKQNFTVVP 600
>AF039712-3|AAK21400.3| 393|Caenorhabditis elegans Hypothetical
protein F54D7.2 protein.
Length = 393
Score = 31.5 bits (68), Expect = 0.56
Identities = 15/24 (62%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = -1
Query: 199 FDSHKSSCRDNSLPFSVY-QHPAW 131
FDS+K +C DNS P SVY HP W
Sbjct: 24 FDSYKYNCVDNS-PLSVYVSHPFW 46
>U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical
protein C17H11.6c protein.
Length = 778
Score = 28.3 bits (60), Expect = 5.2
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +3
Query: 300 PVVVKRIFILGPSHHVRIAGCALSSLDKYQTPLYDLTIDKQIYAELEATRQFDRMDEQTD 479
P+++ ++ + P R GC LSS D L D+ ++Q+Y A+ D TD
Sbjct: 395 PIMLAYVYGVVPLSLCRNGGCGLSSSDS-SLALADID-EEQLYGTPGASAPVDLSQFMTD 452
Query: 480 ENEHSIEMHL-PYIAKVMEEYKTSF 551
++ + + P I + E KT +
Sbjct: 453 ASKREDIVSIDPSILSMPREMKTRY 477
>U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical
protein C17H11.6a protein.
Length = 793
Score = 28.3 bits (60), Expect = 5.2
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +3
Query: 300 PVVVKRIFILGPSHHVRIAGCALSSLDKYQTPLYDLTIDKQIYAELEATRQFDRMDEQTD 479
P+++ ++ + P R GC LSS D L D+ ++Q+Y A+ D TD
Sbjct: 395 PIMLAYVYGVVPLSLCRNGGCGLSSSDS-SLALADID-EEQLYGTPGASAPVDLSQFMTD 452
Query: 480 ENEHSIEMHL-PYIAKVMEEYKTSF 551
++ + + P I + E KT +
Sbjct: 453 ASKREDIVSIDPSILSMPREMKTRY 477
>Z92847-6|CAB07423.1| 1076|Caenorhabditis elegans Hypothetical
protein T12A7.5 protein.
Length = 1076
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -1
Query: 424 ICLSMVRS*RGVWYLSRDERAHPAILTWCDGPNMKIRLTTTGLTCLYAYAEQ 269
I LSM++ GVWY++ D A P + NMK ++ L +Y YA++
Sbjct: 411 ITLSMLQ---GVWYIAADLNADPKMFLQSTVINMKRIQNSSNLELIY-YAQK 458
>Z73911-9|CAA98143.1| 1076|Caenorhabditis elegans Hypothetical
protein T12A7.5 protein.
Length = 1076
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -1
Query: 424 ICLSMVRS*RGVWYLSRDERAHPAILTWCDGPNMKIRLTTTGLTCLYAYAEQ 269
I LSM++ GVWY++ D A P + NMK ++ L +Y YA++
Sbjct: 411 ITLSMLQ---GVWYIAADLNADPKMFLQSTVINMKRIQNSSNLELIY-YAQK 458
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,510,574
Number of Sequences: 27780
Number of extensions: 327359
Number of successful extensions: 845
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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