Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1d13
         (737 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    25   3.2  
AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450 CY...    23   7.4  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   9.8  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           23   9.8  

>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
 Frame = +2

Query: 47  VVTQISATMSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTH--VIN 220
           +VT+++  +  G+D+LA  +EDV + L        E       T +++RR DGT    + 
Sbjct: 202 IVTEMAEVLITGIDMLA-KKEDVERGL----QRALERTAVAATTSLWERR-DGTQRARVR 255

Query: 221 LRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRAVLK 337
           L R    L+L  R VV       V ++ S P  Q++ ++
Sbjct: 256 LPRRDTDLLLDKRIVVG----HSVCLVRSAPKQQQSAVR 290


>AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450
           CYP6P3 protein.
          Length = 509

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -1

Query: 737 PQPVPWLVVHPFHFLQGHGRRTNQPQHPSAGH 642
           P+    ++V  F+    HG  TN    P  GH
Sbjct: 90  PELAKTILVKDFNVFHDHGVFTNAKDDPLTGH 121


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -1

Query: 686 HGRRTNQPQHPSAGHGEAHH 627
           HG  T+   H S G G  HH
Sbjct: 416 HGSPTHLHNHRSGGGGRHHH 435


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 9/34 (26%), Positives = 15/34 (44%)
 Frame = -1

Query: 674 TNQPQHPSAGHGEAHHEASTLHVPTTTTSNQ*SG 573
           T+ P H       +H+E    H    ++SN  +G
Sbjct: 68  TSSPYHAPPSPANSHYEPMECHSAVNSSSNSSTG 101


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 882,616
Number of Sequences: 2352
Number of extensions: 21219
Number of successful extensions: 34
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)