Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1c24
(713 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1415 + 26410999-26411148,26411228-26411290,26412623-264126... 40 0.001
11_01_0202 + 1606317-1606487,1606743-1606805,1607045-1607116,160... 36 0.032
05_07_0280 - 28920864-28920971,28921076-28921175,28921267-289213... 36 0.032
03_02_0633 + 9978193-9978376,9978661-9978845,9979284-9979466,997... 36 0.042
08_02_1048 + 23936193-23936376,23936731-23936915,23937332-239373... 35 0.074
12_01_0206 + 1555278-1555448,1555710-1555772,1556236-1556307,155... 33 0.17
05_06_0173 - 26140725-26140838,26141125-26141352,26141440-261415... 33 0.17
05_04_0415 - 21080600-21080941,21081119-21081217,21085363-210854... 33 0.17
05_05_0315 - 24030695-24030787,24030896-24030995,24031120-240312... 33 0.30
01_06_1074 + 34318685-34319314,34319429-34319546,34319662-343198... 33 0.30
01_05_0743 + 24835349-24836009,24836925-24837068,24837154-248373... 33 0.30
03_02_0818 - 11496429-11496767,11496847-11496903,11497040-114971... 32 0.52
03_06_0394 + 33592780-33593310,33593890-33594013,33594233-335943... 31 0.91
02_01_0581 - 4307182-4307358,4307387-4307461,4307559-4307621,430... 31 1.2
01_01_0548 - 4033077-4033349,4034007-4034261,4034362-4034533,403... 31 1.2
12_02_1155 + 26541137-26541142,26541244-26542623,26542730-265428... 30 2.1
12_01_0217 + 1647319-1648327,1648462-1648577,1648650-1648817,164... 30 2.1
11_01_0216 + 1693889-1694897,1695034-1695149,1695222-1695389,169... 30 2.1
04_04_0779 - 28023735-28024058,28024520-28024618,28024704-280249... 30 2.1
12_01_0084 - 678324-679643 29 3.7
11_01_0083 - 629885-631189 29 3.7
03_01_0187 - 1492732-1492935,1493708-1493765,1494871-1494947,149... 29 3.7
01_02_0047 + 10621234-10621422,10621512-10621574,10623049-106231... 29 3.7
12_01_0008 + 63393-64004 29 4.8
11_01_0009 + 67344-67955 29 4.8
10_08_0364 + 17217631-17217833,17218134-17218308,17218391-172184... 29 4.8
07_03_0947 - 22805419-22805571,22805736-22805966,22806161-228063... 29 4.8
01_07_0232 + 42182942-42183490,42183593-42183661,42184320-421844... 29 4.8
01_05_0490 + 22672241-22674679 29 4.8
03_02_0214 - 6486899-6487213,6487306-6487579,6487944-6489937 28 6.4
07_03_0588 - 19715677-19715754,19715843-19715942,19716170-197162... 28 8.5
02_05_0665 - 30720842-30721003,30721290-30721448,30721555-307216... 28 8.5
>07_03_1415 +
26410999-26411148,26411228-26411290,26412623-26412694,
26412798-26412905,26413023-26413103,26413176-26413229,
26413282-26413315,26413405-26413451,26413538-26413747,
26413861-26413962,26414240-26414356,26414460-26414531,
26414645-26414719,26414866-26414970
Length = 429
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/104 (22%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Frame = +3
Query: 423 GRFGKISILSHKPTSKLYLQKTISAHNF---NVDEIKVHQLMN----DHPNFIKIYFNHG 581
G FGK+ + H T + K + +DE ++ HPN ++++
Sbjct: 15 GHFGKVKLARHADTGAAFAIKILDRQRILAMKIDEQIKREIATLKLLKHPNVVRLHEVSA 74
Query: 582 FINNQVIVMDYIDCPDLFETLQIKGELSHQLVSNIIXQLCEALN 713
+V++Y++ +LF+ + +KG+LS + + QL +A++
Sbjct: 75 SKTKIYMVLEYVNGGELFDKIALKGKLSEKEGRKLFQQLMDAVS 118
>11_01_0202 +
1606317-1606487,1606743-1606805,1607045-1607116,
1607244-1607351,1607497-1607538,1607965-1608018,
1608130-1608255,1608338-1608427,1608735-1608857,
1608963-1609070,1609412-1609573,1609655-1609711,
1609792-1609884
Length = 422
Score = 35.9 bits (79), Expect = 0.032
Identities = 20/66 (30%), Positives = 33/66 (50%)
Frame = +3
Query: 516 EIKVHQLMNDHPNFIKIYFNHGFINNQVIVMDYIDCPDLFETLQIKGELSHQLVSNIIXQ 695
EI +L+ HPN ++IY G N IV++Y+ +LF+T+ G + Q
Sbjct: 61 EISTMKLIK-HPNVVRIYEVMGSKTNIYIVLEYVTGGELFDTIVNHGRMREDEARRYFQQ 119
Query: 696 LCEALN 713
L A++
Sbjct: 120 LINAVD 125
>05_07_0280 -
28920864-28920971,28921076-28921175,28921267-28921394,
28922013-28922180,28922280-28922395,28922584-28922736,
28922904-28923047,28923401-28924133
Length = 549
Score = 35.9 bits (79), Expect = 0.032
Identities = 22/105 (20%), Positives = 55/105 (52%), Gaps = 8/105 (7%)
Frame = +3
Query: 423 GRFGKISILSHKPTSKLYLQKTISAHNF----NVDEIK--VHQL--MNDHPNFIKIYFNH 578
G+FG + +HKPT + Y K+I+A ++D+++ VH + + H N +++ +
Sbjct: 99 GQFGVTYLATHKPTGRRYACKSIAARKLARPDDLDDVRREVHIMHHLTGHRNIVELRGAY 158
Query: 579 GFINNQVIVMDYIDCPDLFETLQIKGELSHQLVSNIIXQLCEALN 713
++ +VM+ + +LF+ + +G S + + + ++ ++
Sbjct: 159 EDRHSVNLVMELCEGGELFDRIIARGHYSERAAAALCREIVSVVH 203
>03_02_0633 +
9978193-9978376,9978661-9978845,9979284-9979466,
9979564-9979695,9979826-9980011,9980381-9980470,
9980540-9980623,9980704-9980844,9980919-9981146,
9981511-9981624
Length = 508
Score = 35.5 bits (78), Expect = 0.042
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 8/114 (7%)
Frame = +3
Query: 381 ENCKNVKTRYKIINGRFGKISILSHKPTSKLYLQKTISAHNF-NVD-------EIKVHQL 536
E KN + G FGK+ I HK T K ++ N++ EIK+ +L
Sbjct: 12 EALKNYNLGRTLGIGSFGKVKIAEHKLTGHRVAIKILNRRQMRNMEMEEKAKREIKILRL 71
Query: 537 MNDHPNFIKIYFNHGFINNQVIVMDYIDCPDLFETLQIKGELSHQLVSNIIXQL 698
HP+ I++Y + +VM+Y +LF+ + KG L I Q+
Sbjct: 72 FI-HPHIIRLYEVIYTPTDIYVVMEYCKFGELFDYIVEKGRLQEDEARRIFQQI 124
>08_02_1048 +
23936193-23936376,23936731-23936915,23937332-23937334,
23937354-23937536,23937627-23937758,23937889-23938074,
23938412-23938501,23938559-23938654,23938735-23938875,
23938955-23939185,23939564-23939677
Length = 514
Score = 34.7 bits (76), Expect = 0.074
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Frame = +3
Query: 381 ENCKNVKTRYKIINGRFGKISILSHKPTSKLYLQKTISAHNF-NVD-------EIKVHQL 536
E KN + G FGK+ I HK T K ++ N++ EIK+ +L
Sbjct: 12 EALKNYNLGRTLGIGSFGKVKIAEHKLTGHRVAIKILNRRQMRNMEMEEKAKREIKILRL 71
Query: 537 MNDHPNFIKIYFNHGFINNQVIVMDYIDCPDLFETLQIKGELSHQLVSNIIXQ 695
HP+ I++Y + +VM+Y +LF+ + KG L I Q
Sbjct: 72 F-IHPHIIRLYEVIYTPTDIYVVMEYCKFGELFDYIVEKGRLQEDEARRIFQQ 123
>12_01_0206 +
1555278-1555448,1555710-1555772,1556236-1556307,
1556430-1556537,1556644-1556724,1556861-1556914,
1557020-1557145,1557228-1557317,1557603-1557725,
1557831-1557938,1558287-1558400,1558530-1558586,
1558667-1558741,1558915-1558989
Length = 438
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +3
Query: 516 EIKVHQLMNDHPNFIKIYFNHGFINNQVIVMDYIDCPDLFETLQIKGELSHQLVSNIIXQ 695
EI +L+ HPN ++IY G IV++Y+ +LF+T+ G + Q
Sbjct: 61 EISTMKLIK-HPNVVRIYEVMGSKTKIYIVLEYVTGGELFDTIVNHGRMREDEARRYFQQ 119
Query: 696 LCEALN 713
L A++
Sbjct: 120 LINAVD 125
>05_06_0173 -
26140725-26140838,26141125-26141352,26141440-26141580,
26141707-26141790,26141866-26141955,26142048-26142233,
26142327-26142458,26142559-26142741,26142967-26143151,
26143915-26144089
Length = 505
Score = 33.5 bits (73), Expect = 0.17
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 8/100 (8%)
Frame = +3
Query: 423 GRFGKISILSH-----KPTSKLYLQKTISAHNFNVD---EIKVHQLMNDHPNFIKIYFNH 578
G FGK+ I H K K+ ++ I + EIK+ +L HP+ I++Y
Sbjct: 23 GSFGKVKIAEHILTGHKVAIKILNRRKIKSMEMEEKVKREIKILRLFM-HPHIIRLYEVI 81
Query: 579 GFINNQVIVMDYIDCPDLFETLQIKGELSHQLVSNIIXQL 698
+ +VM+Y+ +LF+ + KG L + Q+
Sbjct: 82 DTPADIYVVMEYVKSGELFDYIVEKGRLQEEEARRFFQQI 121
>05_04_0415 -
21080600-21080941,21081119-21081217,21085363-21085455,
21085802-21085855,21085943-21086044,21086449-21086523,
21086662-21086784
Length = 295
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Frame = +3
Query: 420 NGRFGKISILSHKPTSKLYLQKTISAHNFNVDEIKVHQLMND----HPNFIKIYFNHGFI 587
+G FG ++ ++ T +L KTI N +++ +++N HPN I+
Sbjct: 12 SGNFGVTRLMCNRDTGELVAVKTIPRGNHRINKSAYREIINHRSLRHPNIIQFIEAILTH 71
Query: 588 NNQVIVMDYIDCPDLFETL 644
+ IVM+Y +LF+ +
Sbjct: 72 THLAIVMEYASGGELFDRI 90
>05_05_0315 -
24030695-24030787,24030896-24030995,24031120-24031247,
24031350-24031517,24031626-24031741,24031773-24031896,
24032085-24032254,24032255-24032999
Length = 547
Score = 32.7 bits (71), Expect = 0.30
Identities = 25/120 (20%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Frame = +3
Query: 381 ENCKNVKTRYKIIN-GRFGKISILSHKPTSKLYLQKTISAHNFNVD--------EIKVHQ 533
E+ K++ T K + G+FG S+ +HK T + + KTIS + E+++
Sbjct: 62 EDVKSIYTVGKELGRGQFGVTSLCTHKATGQRFACKTISKRKLSTKEDVEDVRREVQIMY 121
Query: 534 LMNDHPNFIKIYFNHGFINNQVIVMDYIDCPDLFETLQIKGELSHQLVSNIIXQLCEALN 713
+ P +++ + + +VM+ +LF+ + KG + S+++ + E ++
Sbjct: 122 HLAGQPGVVELKGAYEDKHAVHLVMELCAGGELFDRIIAKGHYTEHAASSLLRTIVEIIH 181
>01_06_1074 +
34318685-34319314,34319429-34319546,34319662-34319814,
34319906-34320021,34320135-34320302,34320424-34320551,
34320645-34320744,34320866-34320958
Length = 501
Score = 32.7 bits (71), Expect = 0.30
Identities = 23/120 (19%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
Frame = +3
Query: 381 ENCKNVKTRYKIIN-GRFGKISILSHKPTSKLYLQKTISAHNFNVD--------EIKVHQ 533
E+ +++ T K + G+FG S+ +HK T + + KTI+ + E+++
Sbjct: 55 EDVRSIYTIGKELGRGQFGVTSLCTHKATGQKFACKTIAKRKLSTKEDVEDVRREVQIMY 114
Query: 534 LMNDHPNFIKIYFNHGFINNQVIVMDYIDCPDLFETLQIKGELSHQLVSNIIXQLCEALN 713
+ PN +++ + + +VM+ +LF+ + KG + + ++++ + E ++
Sbjct: 115 HLAGQPNVVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVEIIH 174
>01_05_0743 +
24835349-24836009,24836925-24837068,24837154-24837306,
24837627-24837742,24837826-24837993,24838610-24838737,
24838827-24838926,24839119-24839205
Length = 518
Score = 32.7 bits (71), Expect = 0.30
Identities = 19/100 (19%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Frame = +3
Query: 423 GRFGKISILSHKPTSKLYLQKTIS----AHNFNVD----EIKVHQLMNDHPNFIKIYFNH 578
G+FG +++HK T K + K+I+ AH +++ E+++ + H N +++ +
Sbjct: 75 GQFGVTYLVTHKATGKRFACKSIATRKLAHRDDIEDVRREVQIMHHLTGHRNIVELRGAY 134
Query: 579 GFINNQVIVMDYIDCPDLFETLQIKGELSHQLVSNIIXQL 698
++ ++M+ + +LF+ + +G S + + + ++
Sbjct: 135 EDRHSVNLIMELCEGGELFDRIIARGHYSERAAAALCREI 174
>03_02_0818 -
11496429-11496767,11496847-11496903,11497040-11497153,
11497298-11497408,11497502-11497624,11497918-11498007,
11498088-11498213,11498317-11498370,11498464-11498544,
11498626-11498733,11498852-11498923,11499031-11499093,
11500003-11500194
Length = 509
Score = 31.9 bits (69), Expect = 0.52
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +3
Query: 546 HPNFIKIYFNHGFINNQVIVMDYIDCPDLFETLQIKGELSHQLVSNIIXQLCEALN 713
HPN ++++ G IV++Y+ +LFE + G L + QL A++
Sbjct: 77 HPNVVRLFEVMGSKARIFIVLEYVTGGELFEIIATNGRLKEEEARKYFQQLINAVD 132
>03_06_0394 +
33592780-33593310,33593890-33594013,33594233-33594376,
33594463-33594615,33594973-33595088,33595253-33595420,
33595514-33595744,33596229-33596378
Length = 538
Score = 31.1 bits (67), Expect = 0.91
Identities = 22/104 (21%), Positives = 46/104 (44%), Gaps = 8/104 (7%)
Frame = +3
Query: 423 GRFGKISILSHKPTSKLYLQKTISAHNFN--VD------EIKVHQLMNDHPNFIKIYFNH 578
G FG + + T Y K+IS VD E+++ + M HPN + + +
Sbjct: 73 GEFGITYLCTEAETGDRYACKSISKRKLRTPVDVEDVRREVEIMRHMPSHPNIVSLRAAY 132
Query: 579 GFINNQVIVMDYIDCPDLFETLQIKGELSHQLVSNIIXQLCEAL 710
+N +VM+ + +LF+ + +G + + + + + E +
Sbjct: 133 EDEDNVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 176
>02_01_0581 -
4307182-4307358,4307387-4307461,4307559-4307621,
4307715-4307819,4307917-4308024,4308123-4308260,
4308357-4308446,4308533-4308658,4308728-4308781,
4308865-4308936,4309060-4309167,4309272-4309343,
4309456-4309518,4309747-4309908
Length = 470
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +3
Query: 516 EIKVHQLMNDHPNFIKIYFNHGFINNQVIVMDYIDCPDLFETLQIKGELSHQLVSNIIXQ 695
EI +L+N HPN +KIY +VM+Y+ L + L L + Q
Sbjct: 58 EITAMKLLN-HPNIVKIYEVIATKTKICLVMEYVSGGQLSDKLSYLKRLDEKEAKKYFYQ 116
Query: 696 LCEALN 713
L +A++
Sbjct: 117 LIDAVD 122
>01_01_0548 - 4033077-4033349,4034007-4034261,4034362-4034533,
4034616-4034839,4035168-4035332,4035591-4035881,
4035971-4036303,4036391-4036485,4036570-4036689,
4036778-4036934,4037176-4037279,4037383-4037543,
4037636-4037952,4038655-4038936,4039020-4039321,
4039453-4039543,4040227-4040280,4040367-4040684,
4041008-4041092,4041178-4041266,4041474-4041594,
4042136-4042431
Length = 1434
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = -3
Query: 414 FYTEF*RFCSF---RKIVPAFAA*HLWRWWWP*RIVNMNLYNLIYSIIGTI 271
FYT + FC F RK +PA+ WRW++ V+ LY L+ S G +
Sbjct: 1329 FYTLWNLFCGFMIPRKRIPAW-----WRWYYWANPVSWTLYGLLTSQFGDL 1374
>12_02_1155 +
26541137-26541142,26541244-26542623,26542730-26542852,
26542996-26543168,26543332-26543572,26543931-26544023,
26544092-26544232,26544358-26544450,26544633-26544837,
26544993-26545078,26545532-26545620,26545736-26545820,
26545898-26545954,26546319-26546399,26547130-26547321
Length = 1014
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 7/106 (6%)
Frame = +3
Query: 414 IINGRFGKISILSHKPTSKLY----LQKTISAHNFNVDEIKVHQ---LMNDHPNFIKIYF 572
I G FG++ + + T L+ L+K V+ I + + +P ++ ++
Sbjct: 618 ISRGAFGRVFLAKKRVTGDLFAIKVLKKADMIRKNAVESILAERDILISARNPFVVRFFY 677
Query: 573 NHGFINNQVIVMDYIDCPDLFETLQIKGELSHQLVSNIIXQLCEAL 710
+ N +VM+Y++ DL+ L+ G L + + +L AL
Sbjct: 678 SFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDMARTYMAELVLAL 723
>12_01_0217 +
1647319-1648327,1648462-1648577,1648650-1648817,
1648911-1649038,1649121-1649220,1649329-1649433
Length = 541
Score = 29.9 bits (64), Expect = 2.1
Identities = 25/112 (22%), Positives = 54/112 (48%), Gaps = 12/112 (10%)
Frame = +3
Query: 390 KNVKTRYKIIN----GRFGKISILSHKPTSKLYLQKTIS----AHNFNVD----EIKVHQ 533
+ V+T Y I G+FG + +HK T + KTI+ A+ +VD E+++
Sbjct: 77 EEVRTTYSIGKELGRGQFGVTHLCTHKATGEKLACKTIAKRKLANKEDVDDVRREVQIMH 136
Query: 534 LMNDHPNFIKIYFNHGFINNQVIVMDYIDCPDLFETLQIKGELSHQLVSNII 689
++ PN + + + +N +VM+ +LF+ + +G + + + ++
Sbjct: 137 HLSGQPNIVDLRGAYEDKHNVHLVMELCAGGELFDRIIARGHYTERAAAALL 188
>11_01_0216 +
1693889-1694897,1695034-1695149,1695222-1695389,
1695482-1695609,1695692-1695791,1696124-1696168
Length = 521
Score = 29.9 bits (64), Expect = 2.1
Identities = 25/112 (22%), Positives = 54/112 (48%), Gaps = 12/112 (10%)
Frame = +3
Query: 390 KNVKTRYKIIN----GRFGKISILSHKPTSKLYLQKTIS----AHNFNVD----EIKVHQ 533
+ V+T Y I G+FG + +HK T + KTI+ A+ +VD E+++
Sbjct: 77 EEVRTTYSIGKELGRGQFGVTHLCTHKATGEKLACKTIAKRKLANKEDVDDVRREVQIMH 136
Query: 534 LMNDHPNFIKIYFNHGFINNQVIVMDYIDCPDLFETLQIKGELSHQLVSNII 689
++ PN + + + +N +VM+ +LF+ + +G + + + ++
Sbjct: 137 HLSGQPNIVDLRGAYEDKHNVHLVMELCAGGELFDRIIARGHYTERAAAALL 188
>04_04_0779 -
28023735-28024058,28024520-28024618,28024704-28024940,
28025227-28025334,28025427-28025486,28025813-28025888,
28025984-28026144,28026374-28026436,28026543-28026630,
28026872-28027612,28027695-28028239
Length = 833
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/55 (23%), Positives = 26/55 (47%)
Frame = +3
Query: 546 HPNFIKIYFNHGFINNQVIVMDYIDCPDLFETLQIKGELSHQLVSNIIXQLCEAL 710
HPN ++ Y + + I ++Y+ + + LQ G+L Q + + Q+ L
Sbjct: 468 HPNIVQYYGSETVDDKLYIYLEYVSGGSIHKLLQEYGQLGEQAIRSYTQQILSGL 522
>12_01_0084 - 678324-679643
Length = 439
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +3
Query: 546 HPNFIKIYFNHGFINNQVIVMDYIDCPDLFETLQIKGELSHQLVSNIIXQLCEALN 713
H N ++++ N VM+Y+ +LFE + +G+L+ + QL A++
Sbjct: 69 HKNIVQLHEVMATRNKIYFVMEYVKGGELFEKVAKRGKLTEVVAHKYFQQLISAVD 124
>11_01_0083 - 629885-631189
Length = 434
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +3
Query: 546 HPNFIKIYFNHGFINNQVIVMDYIDCPDLFETLQIKGELSHQLVSNIIXQLCEALN 713
H N ++++ N VM+Y+ +LFE + +G+L+ + QL A++
Sbjct: 69 HKNIVQLHEVMATRNKIYFVMEYVKGGELFEKVAKRGKLTEVVAHKYFQQLISAVD 124
>03_01_0187 -
1492732-1492935,1493708-1493765,1494871-1494947,
1495086-1495160,1495259-1495315,1495451-1495567,
1495805-1495915,1496029-1496151,1496304-1496393,
1496480-1496605,1496687-1496740,1496975-1497055,
1497147-1497254,1497443-1497514,1497626-1497688,
1498417-1498629
Length = 542
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/66 (24%), Positives = 32/66 (48%)
Frame = +3
Query: 516 EIKVHQLMNDHPNFIKIYFNHGFINNQVIVMDYIDCPDLFETLQIKGELSHQLVSNIIXQ 695
EI +L+ HPN ++++ + +V++Y+D +LF+ + G L Q
Sbjct: 75 EISTMKLIK-HPNVVQLHEVMASKSKIYMVLEYVDGGELFDKIVNSGRLGEDEARRYFHQ 133
Query: 696 LCEALN 713
L A++
Sbjct: 134 LINAVD 139
>01_02_0047 +
10621234-10621422,10621512-10621574,10623049-10623120,
10623163-10623234,10623335-10623442,10623615-10623695,
10623780-10623833,10623921-10624046,10624139-10624345,
10624457-10624558,10624711-10624827,10624930-10625001,
10625096-10625170,10625297-10625416
Length = 485
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/38 (28%), Positives = 25/38 (65%)
Frame = +3
Query: 600 IVMDYIDCPDLFETLQIKGELSHQLVSNIIXQLCEALN 713
+V++Y++ +LF+ + +KG+LS + QL +A++
Sbjct: 118 MVLEYVNGGELFDKIAVKGKLSEHEGRRLFQQLIDAVS 155
>12_01_0008 + 63393-64004
Length = 203
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 326 HGHHHRHKCYAANAGTILRKLQKRQ 400
H HHH H YAA A LQ++Q
Sbjct: 110 HHHHHHHHPYAAAAAAQSHHLQQQQ 134
>11_01_0009 + 67344-67955
Length = 203
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 326 HGHHHRHKCYAANAGTILRKLQKRQ 400
H HHH H YAA A LQ++Q
Sbjct: 110 HHHHHHHHPYAAAAAAQSHHLQQQQ 134
>10_08_0364 +
17217631-17217833,17218134-17218308,17218391-17218474,
17218561-17218802,17218883-17219108,17219246-17219325,
17219408-17219492,17219665-17219796,17219927-17220040,
17220123-17220170,17220413-17220497,17220722-17220834
Length = 528
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/88 (22%), Positives = 39/88 (44%), Gaps = 7/88 (7%)
Frame = +3
Query: 423 GRFGKISILSHKPTSKLY----LQKTISAHNFNVDEIKVHQLMN---DHPNFIKIYFNHG 581
G FG++ + K T +Y L+K+ V+ +K + + DH +K+Y +
Sbjct: 122 GAFGEVRVCREKNTGNVYAMKKLRKSEMLRRGQVEHVKAERNLLAEVDHHCIVKLYCSFQ 181
Query: 582 FINNQVIVMDYIDCPDLFETLQIKGELS 665
++M+Y+ D+ L K L+
Sbjct: 182 DSEYLYLIMEYLPGGDMMTLLMRKDTLT 209
>07_03_0947 -
22805419-22805571,22805736-22805966,22806161-22806328,
22806425-22806540,22806853-22807005,22807241-22807384,
22807584-22807707,22808126-22808689
Length = 550
Score = 28.7 bits (61), Expect = 4.8
Identities = 21/104 (20%), Positives = 45/104 (43%), Gaps = 8/104 (7%)
Frame = +3
Query: 423 GRFGKISILSHKPTSKLYLQKTISAHNFN--VD------EIKVHQLMNDHPNFIKIYFNH 578
G FG + + + T Y K+IS VD E+ + + + HPN + + +
Sbjct: 84 GEFGVTYLCTERETGDAYACKSISKKKLRTAVDIEDVRREVDIMRHLPKHPNIVTLRDTY 143
Query: 579 GFINNQVIVMDYIDCPDLFETLQIKGELSHQLVSNIIXQLCEAL 710
N +VM+ + +LF+ + +G + + + + + E +
Sbjct: 144 EDDNAVHLVMELCEGGELFDRIVARGHYTERAAALVTRTIVEVV 187
>01_07_0232 +
42182942-42183490,42183593-42183661,42184320-42184451,
42184547-42184600,42184714-42184758,42185383-42185522,
42185777-42185902,42185985-42186002,42186631-42187276,
42188121-42188843
Length = 833
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 298 IVQIHIYDSSWPPPPPQML 354
+VQ I SSWPPPPP L
Sbjct: 401 LVQQPIAMSSWPPPPPVQL 419
>01_05_0490 + 22672241-22674679
Length = 812
Score = 28.7 bits (61), Expect = 4.8
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +1
Query: 313 IYDSSWPPPPPQMLRCKRW 369
+ +++ PPPPP + R +RW
Sbjct: 332 VEETTMPPPPPPLTRSRRW 350
>03_02_0214 - 6486899-6487213,6487306-6487579,6487944-6489937
Length = 860
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = +3
Query: 417 INGRFGKISILSHKPTSKLYLQKTISAHNFNVDEIKVHQL-MNDHPNFIKIYFNHGFINN 593
+ GRF + S+ +K++ K + N + D + VH + P F++ FN I
Sbjct: 170 LGGRFDRALWQSYVSANKIFADKVLEVINPDDDFVWVHDYHLMVLPTFLRKRFNR--IKL 227
Query: 594 QVIVMDYIDCPDLFETLQIKGELSHQLVSN 683
+ ++++TL ++ EL L+++
Sbjct: 228 GFFLHSPFPSSEIYKTLPVREELLRALLNS 257
>07_03_0588 -
19715677-19715754,19715843-19715942,19716170-19716297,
19716385-19716552,19716623-19716735,19716820-19716972,
19717082-19717225,19718710-19719427
Length = 533
Score = 27.9 bits (59), Expect = 8.5
Identities = 26/121 (21%), Positives = 54/121 (44%), Gaps = 9/121 (7%)
Frame = +3
Query: 378 YENCKNVKTRYKIIN-GRFGKISILSHKPTSKLYLQKTISAHNF--NVD------EIKVH 530
Y++ ++V + K + G+FG + + + K Y K+IS D EI++
Sbjct: 78 YDDVRSVYSLGKELGRGQFGVTYLCTEIASGKQYACKSISKRKLVSKADKEDIRREIQIM 137
Query: 531 QLMNDHPNFIKIYFNHGFINNQVIVMDYIDCPDLFETLQIKGELSHQLVSNIIXQLCEAL 710
Q ++ N ++ + +N +VM+ +LF+ + KG S + + I + +
Sbjct: 138 QHLSGQQNIVEFRGAYEDKSNVHVVMELCAGGELFDRIIAKGHYSERAAATICRAVVNVV 197
Query: 711 N 713
N
Sbjct: 198 N 198
>02_05_0665 -
30720842-30721003,30721290-30721448,30721555-30721687,
30722042-30722227,30722377-30722906
Length = 389
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 529 WTFISSTLKLCAEIVFCKYNLLVG 458
WT I+ L++ A CKYN+L G
Sbjct: 362 WTCITKWLRMHATCPLCKYNILKG 385
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,975,213
Number of Sequences: 37544
Number of extensions: 331628
Number of successful extensions: 1294
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1279
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -