Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1c23
         (404 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    25   1.4  
U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         23   5.6  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   5.6  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     23   5.6  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     23   5.6  
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     23   5.6  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         22   7.4  
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    22   7.4  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    22   7.4  
AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding pr...    22   9.8  
AY146743-1|AAO12103.1|  192|Anopheles gambiae odorant-binding pr...    22   9.8  

>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
           protease protein.
          Length = 1322

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 311 PESPSRGVTPAPRQTDDTSPLASLGDKS 394
           P+ PSR   PAP+Q        + GD++
Sbjct: 385 PQQPSRPTIPAPQQQTPPRQPPATGDRA 412


>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 179 FFDLRLIKTYYYRIQNF 129
           FFDL+  K Y++ I  +
Sbjct: 527 FFDLQFYKKYFFEIDQY 543


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +2

Query: 254 GGRSGLGYKASGGEAARRGPESPSRGVTPAPRQ 352
           GGR+G G  A+G E  ++   +  R    A R+
Sbjct: 568 GGRAGGGVGATGAEKQQQNRSNHHRTTEQADRE 600


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 179 FFDLRLIKTYYYRIQNF 129
           FFDL+  K Y++ I  +
Sbjct: 527 FFDLQFYKKYFFEIDQY 543


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 179 FFDLRLIKTYYYRIQNF 129
           FFDL+  K Y++ I  +
Sbjct: 527 FFDLQFYKKYFFEIDQY 543


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 179 FFDLRLIKTYYYRIQNF 129
           FFDL+  K Y++ I  +
Sbjct: 527 FFDLQFYKKYFFEIDQY 543


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 266  GLGYKASGGEAARRGPESPS 325
            G+G     GE  RRG  SPS
Sbjct: 1296 GVGTDNDMGEEGRRGASSPS 1315


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 36  NASSHIRRHC 7
           N  +HIRRHC
Sbjct: 377 NLQAHIRRHC 386


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 36  NASSHIRRHC 7
           N  +HIRRHC
Sbjct: 408 NLQAHIRRHC 417


>AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding
           protein AgamOBP38 protein.
          Length = 336

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 370 RRCVISLPRSRCNSSGWAFWT 308
           R CV  LP    +S   A+W+
Sbjct: 108 RACVAELPAPPADSCAGAYWS 128


>AY146743-1|AAO12103.1|  192|Anopheles gambiae odorant-binding
           protein AgamOBP11 protein.
          Length = 192

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -1

Query: 401 CSDSCLPSWRAEMCHQ 354
           C D C  +++ E+C Q
Sbjct: 145 CPDRCTAAYKQELCFQ 160


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 353,853
Number of Sequences: 2352
Number of extensions: 5780
Number of successful extensions: 19
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32494788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)