Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1c23
(404 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC112201-1|AAI12202.1| 1849|Homo sapiens BTAF1 RNA polymerase II... 59 6e-09
AL365398-1|CAI14103.1| 1849|Homo sapiens BTAF1 RNA polymerase II... 59 6e-09
AL359198-2|CAH73478.1| 1849|Homo sapiens BTAF1 RNA polymerase II... 59 6e-09
AJ001017-1|CAA04475.1| 1849|Homo sapiens TBP associated factor p... 59 6e-09
AF038362-1|AAC04573.1| 1849|Homo sapiens TBP-associated factor 1... 59 6e-09
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 33 0.48
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 33 0.48
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 30 2.6
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 30 2.6
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 30 2.6
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 30 2.6
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 30 2.6
AB006622-1|BAA22953.3| 1573|Homo sapiens KIAA0284 protein protein. 30 3.4
AK124189-1|BAC85798.1| 282|Homo sapiens protein ( Homo sapiens ... 29 4.5
BC034051-1|AAH34051.1| 1099|Homo sapiens serine/threonine kinase... 29 5.9
BC014114-1|AAH14114.2| 801|Homo sapiens STK11IP protein protein. 29 5.9
AK091963-1|BAC03778.1| 531|Homo sapiens protein ( Homo sapiens ... 29 5.9
AJ539163-1|CAD62248.1| 959|Homo sapiens xylosyltransferase I pr... 29 5.9
AF450267-1|AAL49726.1| 1099|Homo sapiens LKB1-interacting protei... 29 5.9
AB067485-1|BAB67791.1| 1013|Homo sapiens KIAA1898 protein protein. 29 5.9
AB002337-1|BAA20797.2| 1709|Homo sapiens KIAA0339 protein protein. 29 5.9
U58994-1|AAD10849.1| 407|Homo sapiens ladinin protein. 29 7.8
U42408-1|AAB58817.1| 517|Homo sapiens ladinin protein. 29 7.8
CR456363-1|CAG30249.1| 212|Homo sapiens Em:AC008101.5 protein. 29 7.8
BC071890-1|AAH71890.1| 517|Homo sapiens ladinin 1 protein. 29 7.8
BC068012-1|AAH68012.1| 1098|Homo sapiens ATXN2L protein protein. 29 7.8
BC009742-1|AAH09742.1| 517|Homo sapiens ladinin 1 protein. 29 7.8
AL669894-1|CAI13317.1| 879|Homo sapiens chromosome 9 open readi... 29 7.8
AL358815-1|CAI15128.1| 879|Homo sapiens chromosome 9 open readi... 29 7.8
AL354797-2|CAI39466.1| 879|Homo sapiens chromosome 9 open readi... 29 7.8
AF153415-1|AAG43365.1| 911|Homo sapiens chromosome 9 open readi... 29 7.8
>BC112201-1|AAI12202.1| 1849|Homo sapiens BTAF1 RNA polymerase II,
B-TFIID transcription factor-associated, 170kDa protein.
Length = 1849
Score = 58.8 bits (136), Expect = 6e-09
Identities = 28/59 (47%), Positives = 37/59 (62%)
Frame = +3
Query: 225 SRLDRLFVLLEXXXXXXXXXXXXXQLXEVQKAHPEELHRLLGRLMTHLRSPAWETRVAA 401
SRLDRLF+LL+ QL EV K HP EL+ LL +++ +LRS W+TR+AA
Sbjct: 4 SRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLIYLRSANWDTRIAA 62
>AL365398-1|CAI14103.1| 1849|Homo sapiens BTAF1 RNA polymerase II,
B-TFIID transcription factor-associated, 170kDa (Mot1
protein.
Length = 1849
Score = 58.8 bits (136), Expect = 6e-09
Identities = 28/59 (47%), Positives = 37/59 (62%)
Frame = +3
Query: 225 SRLDRLFVLLEXXXXXXXXXXXXXQLXEVQKAHPEELHRLLGRLMTHLRSPAWETRVAA 401
SRLDRLF+LL+ QL EV K HP EL+ LL +++ +LRS W+TR+AA
Sbjct: 4 SRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLIYLRSANWDTRIAA 62
>AL359198-2|CAH73478.1| 1849|Homo sapiens BTAF1 RNA polymerase II,
B-TFIID transcription factor-associated, 170kDa (Mot1
protein.
Length = 1849
Score = 58.8 bits (136), Expect = 6e-09
Identities = 28/59 (47%), Positives = 37/59 (62%)
Frame = +3
Query: 225 SRLDRLFVLLEXXXXXXXXXXXXXQLXEVQKAHPEELHRLLGRLMTHLRSPAWETRVAA 401
SRLDRLF+LL+ QL EV K HP EL+ LL +++ +LRS W+TR+AA
Sbjct: 4 SRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLIYLRSANWDTRIAA 62
>AJ001017-1|CAA04475.1| 1849|Homo sapiens TBP associated factor
protein.
Length = 1849
Score = 58.8 bits (136), Expect = 6e-09
Identities = 28/59 (47%), Positives = 37/59 (62%)
Frame = +3
Query: 225 SRLDRLFVLLEXXXXXXXXXXXXXQLXEVQKAHPEELHRLLGRLMTHLRSPAWETRVAA 401
SRLDRLF+LL+ QL EV K HP EL+ LL +++ +LRS W+TR+AA
Sbjct: 4 SRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLIYLRSANWDTRIAA 62
>AF038362-1|AAC04573.1| 1849|Homo sapiens TBP-associated factor 172
protein.
Length = 1849
Score = 58.8 bits (136), Expect = 6e-09
Identities = 28/59 (47%), Positives = 37/59 (62%)
Frame = +3
Query: 225 SRLDRLFVLLEXXXXXXXXXXXXXQLXEVQKAHPEELHRLLGRLMTHLRSPAWETRVAA 401
SRLDRLF+LL+ QL EV K HP EL+ LL +++ +LRS W+TR+AA
Sbjct: 4 SRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLIYLRSANWDTRIAA 62
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 32.7 bits (71), Expect = 0.48
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 290 GEAARRGPESPSRGVTPAPRQTD-DTSPLASLGDK 391
GE RR SPSR +P+PR+ +TSP +G +
Sbjct: 510 GEVGRRRRHSPSRSASPSPRKRQKETSPRMQMGKR 544
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 32.7 bits (71), Expect = 0.48
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 290 GEAARRGPESPSRGVTPAPRQTD-DTSPLASLGDK 391
GE RR SPSR +P+PR+ +TSP +G +
Sbjct: 510 GEVGRRRRHSPSRSASPSPRKRQKETSPRMQMGKR 544
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.3 bits (65), Expect = 2.6
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 290 GEAARRGPESPSRGVTPAPRQTD-DTSP 370
GE RR SPSR +P+PR+ +TSP
Sbjct: 515 GEVGRRRRHSPSRSASPSPRKRQKETSP 542
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.3 bits (65), Expect = 2.6
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 290 GEAARRGPESPSRGVTPAPRQTD-DTSP 370
GE RR SPSR +P+PR+ +TSP
Sbjct: 515 GEVGRRRRHSPSRSASPSPRKRQKETSP 542
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.3 bits (65), Expect = 2.6
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 290 GEAARRGPESPSRGVTPAPRQTD-DTSP 370
GE RR SPSR +P+PR+ +TSP
Sbjct: 515 GEVGRRRRHSPSRSASPSPRKRQKETSP 542
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 30.3 bits (65), Expect = 2.6
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 290 GEAARRGPESPSRGVTPAPRQTD-DTSP 370
GE RR SPSR +P+PR+ +TSP
Sbjct: 513 GEVGRRRRHSPSRSASPSPRKRQKETSP 540
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 30.3 bits (65), Expect = 2.6
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 290 GEAARRGPESPSRGVTPAPRQTD-DTSP 370
GE RR SPSR +P+PR+ +TSP
Sbjct: 513 GEVGRRRRHSPSRSASPSPRKRQKETSP 540
>AB006622-1|BAA22953.3| 1573|Homo sapiens KIAA0284 protein protein.
Length = 1573
Score = 29.9 bits (64), Expect = 3.4
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = +2
Query: 200 TRPACHHEVAIGSSFRLAGGRSGLGYKASGGEAARRGPESPSRGVTPAPRQTDD 361
+R A + G + RSG S + R G S +R P PR TDD
Sbjct: 1237 SRKAANTATTTGPRQPFSRARSGSARYTSTTQTPRAGSSSRARSRAPGPRDTDD 1290
>AK124189-1|BAC85798.1| 282|Homo sapiens protein ( Homo sapiens
cDNA FLJ42195 fis, clone THYMU2033787. ).
Length = 282
Score = 29.5 bits (63), Expect = 4.5
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 5/62 (8%)
Frame = +2
Query: 230 IGSSFRLAGGRSGLGYKASG-----GEAARRGPESPSRGVTPAPRQTDDTSPLASLGDKS 394
+G S G GLG+ SG GE GV P P + PL+ L S
Sbjct: 218 LGHSLSGVGATPGLGHLLSGVGASPGEDTEHAAALTPCGVPPVPGCRSHSQPLSHLVSSS 277
Query: 395 RC 400
RC
Sbjct: 278 RC 279
>BC034051-1|AAH34051.1| 1099|Homo sapiens serine/threonine kinase 11
interacting protein protein.
Length = 1099
Score = 29.1 bits (62), Expect = 5.9
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +2
Query: 215 HHEVAIGSSFRLAGGRSGLGYKA---SGGEAARRGPESPSRGVTPAPRQTDDTSPLAS 379
H E+ + SSFR GR+ L Y++ G P + + PA Q DT+P S
Sbjct: 424 HPELELMSSFRERFGRNWLQYRSHLEPSGNPLPATPTTSAPSAPPASSQGPDTAPRPS 481
>BC014114-1|AAH14114.2| 801|Homo sapiens STK11IP protein protein.
Length = 801
Score = 29.1 bits (62), Expect = 5.9
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +2
Query: 215 HHEVAIGSSFRLAGGRSGLGYKA---SGGEAARRGPESPSRGVTPAPRQTDDTSPLAS 379
H E+ + SSFR GR+ L Y++ G P + + PA Q DT+P S
Sbjct: 126 HPELELMSSFRERFGRNWLQYRSHLEPSGNPLPATPTTSAPSAPPASSQGPDTAPRPS 183
>AK091963-1|BAC03778.1| 531|Homo sapiens protein ( Homo sapiens
cDNA FLJ34644 fis, clone KIDNE2017040. ).
Length = 531
Score = 29.1 bits (62), Expect = 5.9
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +2
Query: 215 HHEVAIGSSFRLAGGRSGLGYKA---SGGEAARRGPESPSRGVTPAPRQTDDTSPLAS 379
H E+ + SSFR GR+ L Y++ G P + + PA Q DT+P S
Sbjct: 208 HPELELMSSFRERFGRNWLQYRSHLEPSGNPLPATPTTSAPSAPPASSQGPDTAPRPS 265
>AJ539163-1|CAD62248.1| 959|Homo sapiens xylosyltransferase I
protein.
Length = 959
Score = 29.1 bits (62), Expect = 5.9
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +2
Query: 254 GGRSGLGYKASGGEAARRGPESPSRGVTPAPRQTDDTSPLASL 382
GGR GG RG + SRG PA SPL +L
Sbjct: 89 GGRGPQARARGGGPGEPRGQQPASRGALPARALDPHPSPLITL 131
>AF450267-1|AAL49726.1| 1099|Homo sapiens LKB1-interacting protein 1
protein.
Length = 1099
Score = 29.1 bits (62), Expect = 5.9
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +2
Query: 215 HHEVAIGSSFRLAGGRSGLGYKA---SGGEAARRGPESPSRGVTPAPRQTDDTSPLAS 379
H E+ + SSFR GR+ L Y++ G P + + PA Q DT+P S
Sbjct: 424 HPELELMSSFRERFGRNWLQYRSHLEPSGNPLPATPTTSAPSAPPASSQGPDTAPRPS 481
>AB067485-1|BAB67791.1| 1013|Homo sapiens KIAA1898 protein protein.
Length = 1013
Score = 29.1 bits (62), Expect = 5.9
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +2
Query: 215 HHEVAIGSSFRLAGGRSGLGYKA---SGGEAARRGPESPSRGVTPAPRQTDDTSPLAS 379
H E+ + SSFR GR+ L Y++ G P + + PA Q DT+P S
Sbjct: 338 HPELELMSSFRERFGRNWLQYRSHLEPSGNPLPATPTTSAPSAPPASSQGPDTAPRPS 395
>AB002337-1|BAA20797.2| 1709|Homo sapiens KIAA0339 protein protein.
Length = 1709
Score = 29.1 bits (62), Expect = 5.9
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 254 GGRSGLGYKASGGEAARRGPE--SPSRGVTPAPRQTDDTSPLA 376
GG G G + E R P SP+R +PAP T+++ P A
Sbjct: 443 GGGGGGGGPSPEREEVRTSPRPASPARSGSPAPETTNESVPFA 485
>U58994-1|AAD10849.1| 407|Homo sapiens ladinin protein.
Length = 407
Score = 28.7 bits (61), Expect = 7.8
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +2
Query: 221 EVAIGSSFRLAGGRSGLGYKASGGEAARRGPESPSRGVTPAP-RQTDDTSPLA 376
E ++ L GR + KAS E A +SP+ PAP R T PLA
Sbjct: 240 EKSLAPGMALGSGRRLVSEKASIFEKALASEKSPTADAKPAPKRATASEQPLA 292
>U42408-1|AAB58817.1| 517|Homo sapiens ladinin protein.
Length = 517
Score = 28.7 bits (61), Expect = 7.8
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +2
Query: 221 EVAIGSSFRLAGGRSGLGYKASGGEAARRGPESPSRGVTPAP-RQTDDTSPLA 376
E ++ L GR + KAS E A +SP+ PAP R T PLA
Sbjct: 240 EKSLAPGMALGSGRRLVSEKASIFEKALASEKSPTADAKPAPKRATASEQPLA 292
>CR456363-1|CAG30249.1| 212|Homo sapiens Em:AC008101.5 protein.
Length = 212
Score = 28.7 bits (61), Expect = 7.8
Identities = 19/48 (39%), Positives = 20/48 (41%)
Frame = +2
Query: 227 AIGSSFRLAGGRSGLGYKASGGEAARRGPESPSRGVTPAPRQTDDTSP 370
A S AG R+G A G RRGP SP RG TSP
Sbjct: 86 AASSRRSTAGARAGT---ARTGSLLRRGPPSPLRGAAEVEESLFITSP 130
>BC071890-1|AAH71890.1| 517|Homo sapiens ladinin 1 protein.
Length = 517
Score = 28.7 bits (61), Expect = 7.8
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +2
Query: 221 EVAIGSSFRLAGGRSGLGYKASGGEAARRGPESPSRGVTPAP-RQTDDTSPLA 376
E ++ L GR + KAS E A +SP+ PAP R T PLA
Sbjct: 240 EKSLAPGMALGSGRRLVSEKASIFEKALASEKSPAADAKPAPKRATASEQPLA 292
>BC068012-1|AAH68012.1| 1098|Homo sapiens ATXN2L protein protein.
Length = 1098
Score = 28.7 bits (61), Expect = 7.8
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Frame = +2
Query: 212 CHHEVAIGSSFRL---AGGRSGLGYKASGGEAARRGPESPSRGVTPAPRQTDDTSPLASL 382
CHH A ++ L A LG A+ G RRG E P P+Q + A++
Sbjct: 60 CHHVEASAATTALPAPAAASPCLGPVAAAGSGLRRGAEGILAPQPPPPQQHQERPGAAAI 119
Query: 383 G 385
G
Sbjct: 120 G 120
>BC009742-1|AAH09742.1| 517|Homo sapiens ladinin 1 protein.
Length = 517
Score = 28.7 bits (61), Expect = 7.8
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +2
Query: 221 EVAIGSSFRLAGGRSGLGYKASGGEAARRGPESPSRGVTPAP-RQTDDTSPLA 376
E ++ L GR + KAS E A +SP+ PAP R T PLA
Sbjct: 240 EKSLAPGMALGSGRRLVSEKASIFEKALASEKSPTADAKPAPKRATASEQPLA 292
>AL669894-1|CAI13317.1| 879|Homo sapiens chromosome 9 open reading
frame 5 protein.
Length = 879
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 293 EAARRGPESPSRGVTPAPRQTDDTSPLASLG 385
EA RG +P+ +P+P TSP +LG
Sbjct: 306 EAVDRGESAPTLSTSPSPSSPSPTSPSPTLG 336
>AL358815-1|CAI15128.1| 879|Homo sapiens chromosome 9 open reading
frame 5 protein.
Length = 879
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 293 EAARRGPESPSRGVTPAPRQTDDTSPLASLG 385
EA RG +P+ +P+P TSP +LG
Sbjct: 306 EAVDRGESAPTLSTSPSPSSPSPTSPSPTLG 336
>AL354797-2|CAI39466.1| 879|Homo sapiens chromosome 9 open reading
frame 5 protein.
Length = 879
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 293 EAARRGPESPSRGVTPAPRQTDDTSPLASLG 385
EA RG +P+ +P+P TSP +LG
Sbjct: 306 EAVDRGESAPTLSTSPSPSSPSPTSPSPTLG 336
>AF153415-1|AAG43365.1| 911|Homo sapiens chromosome 9 open reading
frame 5 protein.
Length = 911
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 293 EAARRGPESPSRGVTPAPRQTDDTSPLASLG 385
EA RG +P+ +P+P TSP +LG
Sbjct: 306 EAVDRGESAPTLSTSPSPSSPSPTSPSPTLG 336
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,431,769
Number of Sequences: 237096
Number of extensions: 800693
Number of successful extensions: 3115
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 2905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3113
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2985693880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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