Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1c17
         (732 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...   150   4e-38
AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.           83   7e-18
AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.           80   6e-17
AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative deoxynucl...    23   7.4  
AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate deo...    23   7.4  

>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score =  150 bits (364), Expect = 4e-38
 Identities = 69/150 (46%), Positives = 95/150 (63%), Gaps = 2/150 (1%)
 Frame = -1

Query: 483 KAICIISGD--VHGKIYFQQESANRPLKISGYLLNLPRGLHGFHVHEYGDTSNGCTSAGE 310
           KAI  + G   V G +   Q S   P+ I   ++ L  G HGFH+HE GD ++GC S G 
Sbjct: 22  KAIVYLQGTSGVSGNVTISQPSCTEPVFIDINVVGLTPGKHGFHIHEKGDLTDGCASTGG 81

Query: 309 HFNPTNEDHGAPDAEIRHVGDLGNIKSVGYNSLTEINMMDNVMSLYGPHNIIGRSLVVHT 130
           H+NP    HGAP+ ++RHVGDLGNI +   N + + +  D V+SLYG  ++IGR++V+H 
Sbjct: 82  HYNPDKVSHGAPNDQVRHVGDLGNI-AADENGIAKTSYSDTVVSLYGARSVIGRAIVIHA 140

Query: 129 DKDDLGLTEHPLSKTTGNSDGRLGCGIIAI 40
           + DDLG T HP S  TGN+ GR+ CG+I I
Sbjct: 141 EVDDLGKTNHPDSLKTGNAGGRVACGVIGI 170


>AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.
          Length = 100

 Score = 83.4 bits (197), Expect = 7e-18
 Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
 Frame = -1

Query: 306 FNPTNEDHGAPDAEIRHVGDLGNIKSVGYNS-LTEINMMDNVMSLYGPHNIIGRSLVVHT 130
           +NP   DHGAPD    HVGDLGNI  V Y++ L +I + +  ++L G  +IIGR+L +  
Sbjct: 1   YNPDGNDHGAPDDANCHVGDLGNI--VAYSTGLAKIQIANKKLTLVGDRSIIGRTLSISE 58

Query: 129 DKDDLGLTEHPLSKTTGNSDGRLGCGIIAICK 34
            +DDLG  +H  SKTTGNS   + C II + +
Sbjct: 59  YEDDLGRGKHDYSKTTGNSGNCIACAIIGVAR 90


>AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.
          Length = 75

 Score = 80.2 bits (189), Expect = 6e-17
 Identities = 36/75 (48%), Positives = 51/75 (68%)
 Frame = -1

Query: 258 HVGDLGNIKSVGYNSLTEINMMDNVMSLYGPHNIIGRSLVVHTDKDDLGLTEHPLSKTTG 79
           H GD+GNI +   N   ++++    ++L G  N++GRSLVVH D DDLG+  H LSKTTG
Sbjct: 1   HAGDMGNIVA-DENGEAKVDLTATQIALSGALNVVGRSLVVHADPDDLGVGGHELSKTTG 59

Query: 78  NSDGRLGCGIIAICK 34
           ++  RL CG+I +CK
Sbjct: 60  DAGARLACGVIGLCK 74


>AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative
           deoxynucleoside kinase protein.
          Length = 245

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +2

Query: 17  LKR*HHLHMAIIPHPKRPSELPVVLLN 97
           LK  H LH   + H   P   PV++LN
Sbjct: 174 LKELHELHENWLIHGASPRPAPVLVLN 200


>AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate
           deoxyribonucleoside kinaseprotein.
          Length = 246

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +2

Query: 17  LKR*HHLHMAIIPHPKRPSELPVVLLN 97
           LK  H LH   + H   P   PV++LN
Sbjct: 175 LKELHELHENWLIHGASPRPAPVLVLN 201


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 799,871
Number of Sequences: 2352
Number of extensions: 17963
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)