Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1c08
         (683 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-P...   430   e-121
AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-P...   429   e-120
U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog pro...   429   e-120
AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p pro...   429   e-120
BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p pro...   218   5e-57
BT011380-1|AAR96172.1| 1233|Drosophila melanogaster LP07472p pro...    30   3.4  
AY047535-1|AAK77267.1|  640|Drosophila melanogaster GH04440p pro...    30   3.4  
AE013599-782|AAF58990.2| 1233|Drosophila melanogaster CG8777-PA ...    30   3.4  
AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA...    29   7.8  

>AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-PB,
           isoform B protein.
          Length = 237

 Score =  430 bits (1059), Expect = e-121
 Identities = 194/224 (86%), Positives = 208/224 (92%), Gaps = 1/224 (0%)
 Frame = +2

Query: 14  WCHFVK-ITMGRRPARCYRYCKNEPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVH 190
           W   V  + MGRRPARCYRYCKN+PYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVH
Sbjct: 11  WKRLVSGVEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVH 70

Query: 191 LVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRL 370
           LVSDEYEQLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRL
Sbjct: 71  LVSDEYEQLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRL 130

Query: 371 QTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKW 550
           QTGMRGAFGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKW
Sbjct: 131 QTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKW 190

Query: 551 GFTKYERDEFEKLREEGRLANDGCIVQYRPEHGPLDAWRKVQAE 682
           GFTKYER+ +E+LR++ RL  DGC V+YRPEHGP+ AW K Q +
Sbjct: 191 GFTKYERERYEELRDDNRLEPDGCNVKYRPEHGPIAAWEKAQRD 234


>AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-PA,
           isoform A protein.
          Length = 231

 Score =  429 bits (1058), Expect = e-120
 Identities = 192/217 (88%), Positives = 206/217 (94%)
 Frame = +2

Query: 32  ITMGRRPARCYRYCKNEPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 211
           + MGRRPARCYRYCKN+PYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYE
Sbjct: 12  VEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYE 71

Query: 212 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 391
           QLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA
Sbjct: 72  QLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 131

Query: 392 FGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER 571
           FGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER
Sbjct: 132 FGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER 191

Query: 572 DEFEKLREEGRLANDGCIVQYRPEHGPLDAWRKVQAE 682
           + +E+LR++ RL  DGC V+YRPEHGP+ AW K Q +
Sbjct: 192 ERYEELRDDNRLEPDGCNVKYRPEHGPIAAWEKAQRD 228


>U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog
           protein.
          Length = 218

 Score =  429 bits (1056), Expect = e-120
 Identities = 192/215 (89%), Positives = 205/215 (95%)
 Frame = +2

Query: 38  MGRRPARCYRYCKNEPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 217
           MGRRPARCYRYCKN+PYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 1   MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60

Query: 218 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 397
           SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120

Query: 398 KPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDE 577
           KPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER+ 
Sbjct: 121 KPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERER 180

Query: 578 FEKLREEGRLANDGCIVQYRPEHGPLDAWRKVQAE 682
           +E+LR++ RL  DGC V+YRPEHGP+ AW K Q +
Sbjct: 181 YEELRDDNRLEPDGCNVKYRPEHGPIAAWEKAQRD 215


>AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p
           protein.
          Length = 218

 Score =  429 bits (1056), Expect = e-120
 Identities = 192/215 (89%), Positives = 205/215 (95%)
 Frame = +2

Query: 38  MGRRPARCYRYCKNEPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 217
           MGRRPARCYRYCKN+PYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 1   MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60

Query: 218 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 397
           SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120

Query: 398 KPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDE 577
           KPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER+ 
Sbjct: 121 KPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERER 180

Query: 578 FEKLREEGRLANDGCIVQYRPEHGPLDAWRKVQAE 682
           +E+LR++ RL  DGC V+YRPEHGP+ AW K Q +
Sbjct: 181 YEELRDDNRLEPDGCNVKYRPEHGPIAAWEKAQRD 215


>BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p
           protein.
          Length = 197

 Score =  218 bits (533), Expect = 5e-57
 Identities = 125/219 (57%), Positives = 144/219 (65%), Gaps = 2/219 (0%)
 Frame = +2

Query: 32  ITMGRRPARCYRYCKNEPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 211
           + MGRRPARCYRY           C+  P PK R F  G     +  F L          
Sbjct: 5   VEMGRRPARCYRY-----------CKNKPYPKSR-FCRGVPDPKIRIFDL---------- 42

Query: 212 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRI--NKMLSCAGADRLQTGMR 385
                 +E   +C   +LV     D++  ++        RI  NKMLSCAGADRLQTGMR
Sbjct: 43  GRKKATVEDFPLCV--HLVS----DEYE-QLSSEALEAGRICCNKMLSCAGADRLQTGMR 95

Query: 386 GAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKY 565
           GAFGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKY
Sbjct: 96  GAFGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKY 155

Query: 566 ERDEFEKLREEGRLANDGCIVQYRPEHGPLDAWRKVQAE 682
           ER+ +E+LR++ RL  DGC V+YRPEHGP+ AW K Q +
Sbjct: 156 ERERYEELRDDNRLEPDGCNVKYRPEHGPIAAWEKAQRD 194


>BT011380-1|AAR96172.1| 1233|Drosophila melanogaster LP07472p protein.
          Length = 1233

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +2

Query: 2    LSRLWCHFVKITMGRRPARCYRYCKNEPYPKSRFCRGV 115
            +S L  H++ I  G R A CY   +   +P SR  R V
Sbjct: 1106 ISYLTAHYILINEGARRALCYLQTRIRMFPNSRSLRSV 1143


>AY047535-1|AAK77267.1|  640|Drosophila melanogaster GH04440p
           protein.
          Length = 640

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +2

Query: 2   LSRLWCHFVKITMGRRPARCYRYCKNEPYPKSRFCRGV 115
           +S L  H++ I  G R A CY   +   +P SR  R V
Sbjct: 513 ISYLTAHYILINEGARRALCYLQTRIRMFPNSRSLRSV 550


>AE013599-782|AAF58990.2| 1233|Drosophila melanogaster CG8777-PA
            protein.
          Length = 1233

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +2

Query: 2    LSRLWCHFVKITMGRRPARCYRYCKNEPYPKSRFCRGV 115
            +S L  H++ I  G R A CY   +   +P SR  R V
Sbjct: 1106 ISYLTAHYILINEGARRALCYLQTRIRMFPNSRSLRSV 1143


>AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA
           protein.
          Length = 926

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = -1

Query: 236 PPKPLSSAVHIRRTPSARTVESRQRSLSSYPNRRYGSWDQVHPDRTS 96
           PPK  S+    +RTP+         + S+   R   SWD V+  R S
Sbjct: 544 PPKKESAQSAAKRTPADSVFTKATANTSARKPRASDSWDYVYKQRAS 590


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,055,482
Number of Sequences: 53049
Number of extensions: 849446
Number of successful extensions: 2610
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2609
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)