Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1c04
         (420 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071576-1|AAL49198.1|  788|Drosophila melanogaster RE63452p pro...    46   2e-05
AE014298-593|AAF45915.1|  788|Drosophila melanogaster CG6379-PA ...    46   2e-05
AY050236-1|AAK84935.1|  700|Drosophila melanogaster SD02116p pro...    37   0.010
AL035311-3|CAA22952.1|  700|Drosophila melanogaster EG:52C10.7 p...    37   0.010
AF117649-1|AAD22030.1|  700|Drosophila melanogaster Adrift protein.    37   0.010
AE013599-2565|AAF57788.1|  700|Drosophila melanogaster CG5032-PA...    37   0.010
BT001481-1|AAN71236.1|  302|Drosophila melanogaster LD21957p pro...    36   0.029
AE014297-2295|AAF55380.1|  302|Drosophila melanogaster CG5220-PA...    36   0.029

>AY071576-1|AAL49198.1|  788|Drosophila melanogaster RE63452p
           protein.
          Length = 788

 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 21/45 (46%), Positives = 29/45 (64%)
 Frame = +2

Query: 2   VLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSRPANSERYLIC 136
           V KVFD F   ++ ++      F++  + KP SSRPANSERYL+C
Sbjct: 336 VCKVFDLFTPFSVGLVYLMYKCFQQIAIIKPNSSRPANSERYLVC 380


>AE014298-593|AAF45915.1|  788|Drosophila melanogaster CG6379-PA
           protein.
          Length = 788

 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 21/45 (46%), Positives = 29/45 (64%)
 Frame = +2

Query: 2   VLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSRPANSERYLIC 136
           V KVFD F   ++ ++      F++  + KP SSRPANSERYL+C
Sbjct: 336 VCKVFDLFTPFSVGLVYLMYKCFQQIAIIKPNSSRPANSERYLVC 380


>AY050236-1|AAK84935.1|  700|Drosophila melanogaster SD02116p
           protein.
          Length = 700

 Score = 37.1 bits (82), Expect = 0.010
 Identities = 17/47 (36%), Positives = 29/47 (61%)
 Frame = +2

Query: 2   VLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSRPANSERYLICFN 142
           ++K+F  FE  ++ +L      FE+  ++KP +S+  NSE Y+IC N
Sbjct: 272 LVKMFTLFEACSVSLLYTLNCIFEEVHIFKPATSKRGNSEVYVICLN 318


>AL035311-3|CAA22952.1|  700|Drosophila melanogaster EG:52C10.7
           protein.
          Length = 700

 Score = 37.1 bits (82), Expect = 0.010
 Identities = 17/47 (36%), Positives = 29/47 (61%)
 Frame = +2

Query: 2   VLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSRPANSERYLICFN 142
           ++K+F  FE  ++ +L      FE+  ++KP +S+  NSE Y+IC N
Sbjct: 272 LVKMFTLFEACSVSLLYTLNCIFEEVHIFKPATSKRGNSEVYVICLN 318


>AF117649-1|AAD22030.1|  700|Drosophila melanogaster Adrift protein.
          Length = 700

 Score = 37.1 bits (82), Expect = 0.010
 Identities = 17/47 (36%), Positives = 29/47 (61%)
 Frame = +2

Query: 2   VLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSRPANSERYLICFN 142
           ++K+F  FE  ++ +L      FE+  ++KP +S+  NSE Y+IC N
Sbjct: 272 LVKMFTLFEACSVSLLYTLNCIFEEVHIFKPATSKRGNSEVYVICLN 318


>AE013599-2565|AAF57788.1|  700|Drosophila melanogaster CG5032-PA
           protein.
          Length = 700

 Score = 37.1 bits (82), Expect = 0.010
 Identities = 17/47 (36%), Positives = 29/47 (61%)
 Frame = +2

Query: 2   VLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSRPANSERYLICFN 142
           ++K+F  FE  ++ +L      FE+  ++KP +S+  NSE Y+IC N
Sbjct: 272 LVKMFTLFEACSVSLLYTLNCIFEEVHIFKPATSKRGNSEVYVICLN 318


>BT001481-1|AAN71236.1|  302|Drosophila melanogaster LD21957p
           protein.
          Length = 302

 Score = 35.5 bits (78), Expect = 0.029
 Identities = 12/23 (52%), Positives = 20/23 (86%)
 Frame = +2

Query: 68  FEKWVLYKPPSSRPANSERYLIC 136
           F+K+ +YKPPSSRP++ E +++C
Sbjct: 182 FKKFDIYKPPSSRPSSIEAFVVC 204


>AE014297-2295|AAF55380.1|  302|Drosophila melanogaster CG5220-PA
           protein.
          Length = 302

 Score = 35.5 bits (78), Expect = 0.029
 Identities = 12/23 (52%), Positives = 20/23 (86%)
 Frame = +2

Query: 68  FEKWVLYKPPSSRPANSERYLIC 136
           F+K+ +YKPPSSRP++ E +++C
Sbjct: 182 FKKFDIYKPPSSRPSSIEAFVVC 204


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,940,946
Number of Sequences: 53049
Number of extensions: 272055
Number of successful extensions: 472
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 472
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1271883306
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)