Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1c04
(420 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132949-11|CAB70104.2| 927|Caenorhabditis elegans Hypothetical... 38 0.003
AF078792-3|AAC26945.2| 635|Caenorhabditis elegans Hypothetical ... 36 0.009
Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical pr... 30 0.58
Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical pr... 30 0.58
AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical ... 30 0.58
AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical ... 30 0.58
Z54218-2|CAA90956.1| 352|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z93383-9|CAB07630.1| 281|Caenorhabditis elegans Hypothetical pr... 28 2.4
Z81118-4|CAB03327.1| 309|Caenorhabditis elegans Hypothetical pr... 28 2.4
AL021566-2|CAA16502.1| 283|Caenorhabditis elegans Hypothetical ... 28 2.4
Z93383-8|CAB07629.1| 286|Caenorhabditis elegans Hypothetical pr... 27 4.1
U41019-1|AAM51510.1| 542|Caenorhabditis elegans Hypothetical pr... 27 4.1
AJ131181-1|CAA10315.1| 962|Caenorhabditis elegans DAF-18 protei... 27 7.2
AF126286-1|AAD21620.1| 962|Caenorhabditis elegans PTEN phosphat... 27 7.2
AF098286-1|AAD03420.1| 962|Caenorhabditis elegans DAF-18 protein. 27 7.2
AF036706-19|AAK39284.1| 962|Caenorhabditis elegans Abnormal dau... 27 7.2
AF016449-15|AAG24002.1| 496|Caenorhabditis elegans Cytochrome p... 27 7.2
Z93385-5|CAB07639.1| 734|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z36238-6|CAA85279.2| 337|Caenorhabditis elegans Hypothetical pr... 26 9.5
X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomera... 26 9.5
>AL132949-11|CAB70104.2| 927|Caenorhabditis elegans Hypothetical
protein Y53F4B.13 protein.
Length = 927
Score = 37.9 bits (84), Expect = 0.003
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +2
Query: 8 KVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSRPANSERYLIC 136
K+FD F ++ ++ ++ L+KP +SRPANSERY+ C
Sbjct: 419 KLFDIFTPFSVGLIYLMRVCYQSVSLHKPHTSRPANSERYITC 461
>AF078792-3|AAC26945.2| 635|Caenorhabditis elegans Hypothetical
protein Y40D12A.1a protein.
Length = 635
Score = 36.3 bits (80), Expect = 0.009
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 2 VLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSRPANSERYLIC 136
+LK + T ++N ++F KP +SRP +SERY++C
Sbjct: 259 ILKTYRFCAKSTRDVMNLLADNFSSIKAIKPMASRPGSSERYIVC 303
>Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical
protein F14F4.3b protein.
Length = 1427
Score = 30.3 bits (65), Expect = 0.58
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 269 YTHVIFLTNLSTCLSFLIVCDNIF 198
+T +FL N+ TCL FL+V ++F
Sbjct: 911 FTAEVFLQNMITCLGFLVVITSVF 934
>Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical
protein F14F4.3a protein.
Length = 1400
Score = 30.3 bits (65), Expect = 0.58
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 269 YTHVIFLTNLSTCLSFLIVCDNIF 198
+T +FL N+ TCL FL+V ++F
Sbjct: 884 FTAEVFLQNMITCLGFLVVITSVF 907
>AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical
protein F14F4.3b protein.
Length = 1427
Score = 30.3 bits (65), Expect = 0.58
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 269 YTHVIFLTNLSTCLSFLIVCDNIF 198
+T +FL N+ TCL FL+V ++F
Sbjct: 911 FTAEVFLQNMITCLGFLVVITSVF 934
>AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical
protein F14F4.3a protein.
Length = 1400
Score = 30.3 bits (65), Expect = 0.58
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 269 YTHVIFLTNLSTCLSFLIVCDNIF 198
+T +FL N+ TCL FL+V ++F
Sbjct: 884 FTAEVFLQNMITCLGFLVVITSVF 907
>Z54218-2|CAA90956.1| 352|Caenorhabditis elegans Hypothetical
protein F37B12.3 protein.
Length = 352
Score = 28.7 bits (61), Expect = 1.8
Identities = 19/90 (21%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Frame = +2
Query: 116 SERYLICFNKLVRPYCN-----DYVNELEKQFKKYYRI-QXXXXXXXXXXXXXXRVYIKS 277
S ++++CF K + + Y NEL Q ++Y + + ++Y+++
Sbjct: 61 SAKHVVCFQKSEKAFPEYYLIFSYTNELYLQNSRFYILYRFFKPNIIFLQNQFEKLYLRN 120
Query: 278 QRLQIRHHST-WICSFTMSTIILSKMIVCN 364
++I+ WIC + + M+VCN
Sbjct: 121 MIIRIQMLDVGWICVGAVRAVYWLVMLVCN 150
>Z93383-9|CAB07630.1| 281|Caenorhabditis elegans Hypothetical
protein F54B8.10 protein.
Length = 281
Score = 28.3 bits (60), Expect = 2.4
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2
Query: 275 FLYTHVIFLTNLSTCLSFLIVCDNIF*TVFPIH*HNH 165
+L + + + L+FLI D + ++FPI HNH
Sbjct: 83 YLLCPTLLCSTVRATLAFLISFDKVLASIFPILHHNH 119
>Z81118-4|CAB03327.1| 309|Caenorhabditis elegans Hypothetical
protein T10G3.4 protein.
Length = 309
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +2
Query: 296 HHSTWICSFTMSTIIL-SKMIVCNKCLILR 382
H T+ FT+S I+L S +CN CL+LR
Sbjct: 39 HSKTFHPFFTLSFILLISSYAICNICLLLR 68
>AL021566-2|CAA16502.1| 283|Caenorhabditis elegans Hypothetical
protein F08E10.2 protein.
Length = 283
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -2
Query: 251 LTNLSTCLSFLIVCDNIF*TVFPIH*HNH 165
L + L F+I D IF T FPI HNH
Sbjct: 91 LVTIRPILVFVINLDRIFATYFPILYHNH 119
>Z93383-8|CAB07629.1| 286|Caenorhabditis elegans Hypothetical
protein F54B8.9 protein.
Length = 286
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -2
Query: 275 FLYTHVIFLTNLSTCLSFLIVCDNIF*TVFPIH*HNH 165
FL + + L FLI D + ++FPI HNH
Sbjct: 83 FLLWPTLICATMRVTLVFLISFDRLMASLFPISYHNH 119
>U41019-1|AAM51510.1| 542|Caenorhabditis elegans Hypothetical
protein C04E7.4 protein.
Length = 542
Score = 27.5 bits (58), Expect = 4.1
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +2
Query: 8 KVFDAFEHKTIQMLNKFVNHFEK---WVLYKPPSSRPANSE 121
K+F + + ++ML+K V H EK W Y P +R ++E
Sbjct: 501 KIFQTKQARILKMLSKCVTHGEKAALWDEYSPNFARSRSAE 541
>AJ131181-1|CAA10315.1| 962|Caenorhabditis elegans DAF-18 protein
protein.
Length = 962
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 11 VFDAFEHKTIQMLNKFVNHFEK 76
V D FEH+ I +LN++ +F K
Sbjct: 606 VSDFFEHRNIAVLNRYCRYFYK 627
>AF126286-1|AAD21620.1| 962|Caenorhabditis elegans PTEN
phosphatidylinositol 3' phosphatasehomolog DAF-18
protein.
Length = 962
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 11 VFDAFEHKTIQMLNKFVNHFEK 76
V D FEH+ I +LN++ +F K
Sbjct: 606 VSDFFEHRNIAVLNRYCRYFYK 627
>AF098286-1|AAD03420.1| 962|Caenorhabditis elegans DAF-18 protein.
Length = 962
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 11 VFDAFEHKTIQMLNKFVNHFEK 76
V D FEH+ I +LN++ +F K
Sbjct: 606 VSDFFEHRNIAVLNRYCRYFYK 627
>AF036706-19|AAK39284.1| 962|Caenorhabditis elegans Abnormal dauer
formation protein 18 protein.
Length = 962
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 11 VFDAFEHKTIQMLNKFVNHFEK 76
V D FEH+ I +LN++ +F K
Sbjct: 606 VSDFFEHRNIAVLNRYCRYFYK 627
>AF016449-15|AAG24002.1| 496|Caenorhabditis elegans Cytochrome p450
family protein 33C9 protein.
Length = 496
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 104 RPANSERYLICFNKLVRPYCNDYVNELEK 190
R SER++ +K PY N Y+NE+++
Sbjct: 333 RVIGSERHINTADKPNLPYTNAYINEIQR 361
>Z93385-5|CAB07639.1| 734|Caenorhabditis elegans Hypothetical
protein M01E5.5b protein.
Length = 734
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Frame = +2
Query: 287 QIRHHST--WICSFTMSTIILSKMIVCN 364
++RH +T W+CS+T S + +K I+ N
Sbjct: 373 EVRHDNTVTWLCSWTESVLGQNKYIMLN 400
>Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical
protein M01E5.5a protein.
Length = 806
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Frame = +2
Query: 287 QIRHHST--WICSFTMSTIILSKMIVCN 364
++RH +T W+CS+T S + +K I+ N
Sbjct: 445 EVRHDNTVTWLCSWTESVLGQNKYIMLN 472
>Z36238-6|CAA85279.2| 337|Caenorhabditis elegans Hypothetical
protein R74.7 protein.
Length = 337
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 65 HFEKWVLYKPPSSRPANSERYLICFN 142
+F+K L KP SSR ++ E +++C +
Sbjct: 174 YFKKVYLAKPRSSRQSSCEAFVLCLD 199
>X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomerase
protein.
Length = 806
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Frame = +2
Query: 287 QIRHHST--WICSFTMSTIILSKMIVCN 364
++RH +T W+CS+T S + +K I+ N
Sbjct: 445 EVRHDNTVTWLCSWTESVLGQNKYIMLN 472
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,822,343
Number of Sequences: 27780
Number of extensions: 160202
Number of successful extensions: 451
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 451
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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