Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1c03
         (383 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024817-27|AAY86296.1|  636|Caenorhabditis elegans Hypothetical...    32   0.16 
Z81505-1|CAB04122.1|  673|Caenorhabditis elegans Hypothetical pr...    31   0.28 
AF039047-10|AAB94229.2|  400|Caenorhabditis elegans Hypothetical...    30   0.49 
Z70205-2|CAA94116.1|  529|Caenorhabditis elegans Hypothetical pr...    29   1.5  
U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical p...    27   3.4  
Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical pr...    27   6.0  
U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical pr...    27   6.0  
AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-li...    27   6.0  
AF068713-3|AAC17793.1|  286|Caenorhabditis elegans Serpentine re...    27   6.0  
AL117202-18|CAB57896.3|  765|Caenorhabditis elegans Hypothetical...    26   7.9  
AF519108-1|AAM74222.1|  909|Caenorhabditis elegans EOR-1 protein.      26   7.9  
AF502568-1|AAM74151.1|  909|Caenorhabditis elegans EOR-1 protein.      26   7.9  
AF100669-8|AAK39268.1|  909|Caenorhabditis elegans Egl-1 suppres...    26   7.9  
AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical...    26   7.9  
AC024838-4|AAF60819.1|   99|Caenorhabditis elegans Hypothetical ...    26   7.9  

>AC024817-27|AAY86296.1|  636|Caenorhabditis elegans Hypothetical
           protein Y54G2A.40 protein.
          Length = 636

 Score = 31.9 bits (69), Expect = 0.16
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +3

Query: 3   CFMPCRHLAVCTECSRRCKRCCVCNAKIMQRIE 101
           C+  C+H ++CT+C  + K C +C AK + R E
Sbjct: 29  CYCSCQH-SLCTQCFNKYKNCPIC-AKPLVRTE 59


>Z81505-1|CAB04122.1|  673|Caenorhabditis elegans Hypothetical
           protein F16A11.1 protein.
          Length = 673

 Score = 31.1 bits (67), Expect = 0.28
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +3

Query: 9   MPCRHLAVCTECSRRCKRCCVCNAKIMQRIE 101
           +PC H   C++C      C +C   I +RI+
Sbjct: 577 LPCNHDGFCSDCCNMMDHCPLCRKPIEERIQ 607


>AF039047-10|AAB94229.2|  400|Caenorhabditis elegans Hypothetical
           protein K11D12.9 protein.
          Length = 400

 Score = 30.3 bits (65), Expect = 0.49
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = +3

Query: 6   FMPCRHLAVCTEC--SRRCKRCCVCNAKIMQRI 98
           FMPCRHL  C+ C  +   + C  C + I   I
Sbjct: 364 FMPCRHLITCSGCYDASDFRECPTCRSTIENSI 396


>Z70205-2|CAA94116.1|  529|Caenorhabditis elegans Hypothetical
           protein C11H1.3 protein.
          Length = 529

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
 Frame = +3

Query: 9   MPCRHLAVCTEC--SRRCK--RCCVCNA 80
           +PCRHL VC+ C  S R K   C +C +
Sbjct: 282 LPCRHLCVCSNCADSLRYKHNNCPICRS 309


>U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical
           protein C28H8.3 protein.
          Length = 1714

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = -2

Query: 313 TDNSDYRRCRLCRLDATRRRNKIN*QIFSKSLLQVLLCSRLIIFLSYNAIIINSLFL 143
           TDN     C    +D T++   I   + ++S+  VLL S  + F+S  A  I  L +
Sbjct: 225 TDNVTQNVCASQEIDLTKQFETIAFDVLTRSMSVVLLHSIKVNFVSVEAYYIQPLLV 281


>Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical
          protein M02G9.1 protein.
          Length = 909

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +3

Query: 6  FMPCRHLAVCTECSRRCKRCCVCN 77
          F+ C  LA+ T  SRR KR C C+
Sbjct: 11 FLFCLLLALSTAASRRLKRQCGCS 34


>U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical
           protein F31D5.5 protein.
          Length = 1788

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = -1

Query: 260 TQKQNKLANFFKKPFTSFTLQQV---NNFFVIQCNNY**LIFKECRSHLQCLLR*CFDA 93
           T++ ++L NF +K    F   +    N  + I  NNY   +FK   ++ QCL   C D+
Sbjct: 58  TEQPSELDNFNQKYIVFFVNLECGADNCAYQITINNYAWNVFKVLINNKQCLAESCVDS 116


>AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-like
           protein MTH-1 protein.
          Length = 1757

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = -1

Query: 260 TQKQNKLANFFKKPFTSFTLQQV---NNFFVIQCNNY**LIFKECRSHLQCLLR*CFDA 93
           T++ ++L NF +K    F   +    N  + I  NNY   +FK   ++ QCL   C D+
Sbjct: 27  TEQPSELDNFNQKYIVFFVNLECGADNCAYQITINNYAWNVFKVLINNKQCLAESCVDS 85


>AF068713-3|AAC17793.1|  286|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 66 protein.
          Length = 286

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -2

Query: 238 QIFSKSLLQVLLCSRLIIFLSYNAIIINSL 149
           Q F   +L VLLC RL I+ +Y AI  N +
Sbjct: 179 QYFIIGVLSVLLCFRLFIWNNYVAIHANQV 208


>AL117202-18|CAB57896.3|  765|Caenorhabditis elegans Hypothetical
           protein Y47D3A.22 protein.
          Length = 765

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 9/23 (39%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
 Frame = +3

Query: 12  PCRHLAVCTECSRR--CKRCCVC 74
           PC H   C +C+ +   +RC VC
Sbjct: 622 PCGHRVACVDCTEKVAIRRCPVC 644


>AF519108-1|AAM74222.1|  909|Caenorhabditis elegans EOR-1 protein.
          Length = 909

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 38  GMFASVQALLCVQRKNYAAHRNITSVN 118
           G F  V+  + VQ K++AAHRNI + +
Sbjct: 39  GRFCDVE--IVVQNKSFAAHRNILAAH 63


>AF502568-1|AAM74151.1|  909|Caenorhabditis elegans EOR-1 protein.
          Length = 909

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 38  GMFASVQALLCVQRKNYAAHRNITSVN 118
           G F  V+  + VQ K++AAHRNI + +
Sbjct: 39  GRFCDVE--IVVQNKSFAAHRNILAAH 63


>AF100669-8|AAK39268.1|  909|Caenorhabditis elegans Egl-1
           suppressor/dio uptake defective/raf enhancer protein 1
           protein.
          Length = 909

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 38  GMFASVQALLCVQRKNYAAHRNITSVN 118
           G F  V+  + VQ K++AAHRNI + +
Sbjct: 39  GRFCDVE--IVVQNKSFAAHRNILAAH 63


>AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical
           protein F53G12.3 protein.
          Length = 1503

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 2   VFHALPSPGCVHGMF 46
           VFH++P+P  +HG F
Sbjct: 699 VFHSIPNPSAMHGPF 713


>AC024838-4|AAF60819.1|   99|Caenorhabditis elegans Hypothetical
           protein Y59E9AL.5 protein.
          Length = 99

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 15  CRHLAVCTECSRRCKRCCVCNA 80
           C   + C+ CS  C  CC C +
Sbjct: 78  CTSASRCSRCSPCCSGCCSCTS 99


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,844,798
Number of Sequences: 27780
Number of extensions: 139599
Number of successful extensions: 430
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 430
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 566277334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)