Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1c03
(383 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 35 4e-04
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 27 0.075
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 27 0.075
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 27 0.075
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 26 0.13
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 26 0.17
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 25 0.23
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 25 0.30
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 25 0.40
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 0.93
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 0.93
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 23 0.93
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 23 0.93
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 23 0.93
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 23 0.93
S76959-1|AAB33934.1| 85|Apis mellifera olfactory receptor prot... 23 1.2
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 23 1.2
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 22 2.8
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 22 2.8
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 22 2.8
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 22 2.8
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 22 2.8
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 22 2.8
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 2.8
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 2.8
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 2.8
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 2.8
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 4.9
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 6.5
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 6.5
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 20 8.6
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 34.7 bits (76), Expect = 4e-04
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 259 VVSHLSDKDDSDGNRY-YQYNNNCNFIYINV 348
++S LS+K + N Y Y YNNNC +Y N+
Sbjct: 81 IISSLSNKTIHNNNNYKYNYNNNCKKLYYNI 111
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 27.1 bits (57), Expect = 0.075
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 6/36 (16%)
Frame = +1
Query: 259 VVSHLSDKDDSDGNRYY------QYNNNCNFIYINV 348
++S LS+K + N Y YNNNC +Y N+
Sbjct: 81 IISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNI 116
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 27.1 bits (57), Expect = 0.075
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 6/36 (16%)
Frame = +1
Query: 259 VVSHLSDKDDSDGNRYY------QYNNNCNFIYINV 348
++S LS+K + N Y YNNNC +Y N+
Sbjct: 81 IISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNI 116
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 27.1 bits (57), Expect = 0.075
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 6/36 (16%)
Frame = +1
Query: 259 VVSHLSDKDDSDGNRYY------QYNNNCNFIYINV 348
++S LS+K + N Y YNNNC +Y N+
Sbjct: 81 IISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNI 116
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 26.2 bits (55), Expect = 0.13
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 259 VVSHLSDKDDSDGNRYYQYNNNCNFIYINVV 351
++S LS+K + N Y YNN + IN +
Sbjct: 303 IISSLSNKTIHNNNNYNNYNNKKLYYNINYI 333
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 25.8 bits (54), Expect = 0.17
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 6/36 (16%)
Frame = +1
Query: 259 VVSHLSDKDDSDGNRYY------QYNNNCNFIYINV 348
++S LS++ + N Y YNNNC +Y N+
Sbjct: 81 IISSLSNRTIHNNNNYKYNYNNNNYNNNCKKLYYNI 116
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 25.4 bits (53), Expect = 0.23
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 289 SDGNRYYQYNNNCNFIYINVV 351
++ N YNNNC +Y N++
Sbjct: 339 NNNNYNNNYNNNCKKLYYNII 359
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 25.0 bits (52), Expect = 0.30
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 259 VVSHLSDKDDSDGNRYYQYNNNCNFIYINV 348
++S LS+K + N Y YN + IN+
Sbjct: 314 IISSLSNKTIHNNNNYKNYNKKLYYNIINI 343
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 24.6 bits (51), Expect = 0.40
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1
Query: 269 CDTTQKQNKLANFFKKPFTSFTLQQVNN 186
CD +K+N+ F K+P T VNN
Sbjct: 12 CDLLKKRNENDPFLKRPITGDEKWVVNN 39
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 0.93
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 259 VVSHLSDKDDSDGNRYYQYNNN 324
++S LS+ + N Y YNNN
Sbjct: 80 IISSLSNNTIHNNNYKYNYNNN 101
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 0.93
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 259 VVSHLSDKDDSDGNRYYQYNNN 324
++S LS+ + N Y YNNN
Sbjct: 80 IISSLSNNTIHNNNYKYNYNNN 101
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 0.93
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 259 VVSHLSDKDDSDGNRYYQYNNN 324
++S LS+ + N Y YNNN
Sbjct: 81 IISSLSNNTIHNNNYKYNYNNN 102
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 0.93
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 259 VVSHLSDKDDSDGNRYYQYNNN 324
++S LS+ + N Y YNNN
Sbjct: 81 IISSLSNNTIHNNNYKYNYNNN 102
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 0.93
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 259 VVSHLSDKDDSDGNRYYQYNNN 324
++S LS+ + N Y YNNN
Sbjct: 81 IISSLSNNTIHNNNYKYNYNNN 102
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 0.93
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 259 VVSHLSDKDDSDGNRYYQYNNN 324
++S LS+ + N Y YNNN
Sbjct: 81 IISSLSNNTIHNNNYKYNYNNN 102
>S76959-1|AAB33934.1| 85|Apis mellifera olfactory receptor
protein.
Length = 85
Score = 23.0 bits (47), Expect = 1.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 211 VLLCSRLIIFLSYNAIIINSLFLKN 137
V++ S LII +SY I+ N L + +
Sbjct: 18 VVIVSSLIILISYALILFNILHMSS 42
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.0 bits (47), Expect = 1.2
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +1
Query: 289 SDGNRYYQYNNNCNFIYINVV 351
S+ Y YNNN +Y N++
Sbjct: 319 SNNYNYNNYNNNYKPLYYNII 339
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 2.8
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +1
Query: 289 SDGNRYYQYNNNCNFIYINV 348
S+ Y YNNN +Y N+
Sbjct: 86 SNNYNYNNYNNNYKPLYYNI 105
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 2.8
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +1
Query: 289 SDGNRYYQYNNNCNFIYINV 348
S+ Y YNNN +Y N+
Sbjct: 86 SNNYNYNNYNNNYKPLYYNI 105
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 2.8
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +1
Query: 289 SDGNRYYQYNNNCNFIYINV 348
S+ Y YNNN +Y N+
Sbjct: 86 SNNYNYNNYNNNYKPLYYNI 105
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 2.8
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +1
Query: 289 SDGNRYYQYNNNCNFIYINV 348
S+ Y YNNN +Y N+
Sbjct: 86 SNNYNYNNYNNNYKPLYYNI 105
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.8 bits (44), Expect = 2.8
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = -2
Query: 169 AIIINSLFLKNVVVICN 119
AI++N+L +++ +CN
Sbjct: 40 AIVVNTLISNDILPVCN 56
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.8 bits (44), Expect = 2.8
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = -2
Query: 169 AIIINSLFLKNVVVICN 119
AI++N+L +++ +CN
Sbjct: 78 AIVVNTLISNDILPVCN 94
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 2.8
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +1
Query: 289 SDGNRYYQYNNNCNFIYINV 348
S+ Y YNNN +Y N+
Sbjct: 319 SNNYNYNNYNNNYKPLYYNI 338
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 2.8
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +1
Query: 289 SDGNRYYQYNNNCNFIYINV 348
S+ Y YNNN +Y N+
Sbjct: 319 SNNYNYNNYNNNYKPLYYNI 338
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 2.8
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +1
Query: 289 SDGNRYYQYNNNCNFIYINV 348
S+ Y YNNN +Y N+
Sbjct: 319 SNNYNYNNYNNNYKPLYYNI 338
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 2.8
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +1
Query: 289 SDGNRYYQYNNNCNFIYINV 348
S+ Y YNNN +Y N+
Sbjct: 308 SNNYNYNNYNNNYKPLYYNI 327
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 4.9
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 298 NRYYQYNNNCNFIY 339
N Y YNNN N Y
Sbjct: 96 NNYNNYNNNYNTNY 109
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 20.6 bits (41), Expect = 6.5
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 298 NRYYQYNNNCNFIY 339
N Y YNNN N Y
Sbjct: 335 NNYNNYNNNYNNNY 348
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 20.6 bits (41), Expect = 6.5
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +3
Query: 39 ECSRRCKRCCVCNAKIMQR 95
EC++RC C +++QR
Sbjct: 473 ECNKRCNCDIDCINRVVQR 491
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 20.2 bits (40), Expect = 8.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 322 CYYTDNSDYRRCRLC 278
CY+T + + R RLC
Sbjct: 164 CYFTAHVTHPRHRLC 178
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,172
Number of Sequences: 438
Number of extensions: 1770
Number of successful extensions: 31
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 9424380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -