Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1c02
(694 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q90173 Cluster: Zinc finger protein CG30; n=5; Nucleopo... 305 6e-82
UniRef50_O10339 Cluster: Zinc finger protein CG30; n=7; Nucleopo... 148 1e-34
UniRef50_A0EYX0 Cluster: Cg30; n=1; Ecotropis obliqua NPV|Rep: C... 64 2e-09
UniRef50_Q0N424 Cluster: Cg30/ac88-like protein; n=1; Clanis bil... 64 4e-09
UniRef50_Q77K64 Cluster: Cg30 protein; n=3; Nucleopolyhedrovirus... 63 7e-09
UniRef50_Q287I5 Cluster: CG30; n=1; Agrotis segetum nucleopolyhe... 61 2e-08
UniRef50_P17500 Cluster: Major capsid protein; n=15; Nucleopolyh... 54 3e-06
UniRef50_Q9J861 Cluster: ORF76 cg30; n=1; Spodoptera exigua MNPV... 53 8e-06
UniRef50_A2EN30 Cluster: Putative uncharacterized protein; n=1; ... 42 0.011
UniRef50_A5IZX6 Cluster: Cg30-2; n=1; Spodoptera litura granulov... 38 0.23
UniRef50_A1YJ68 Cluster: Cg30; n=1; Spodoptera frugiperda MNPV|R... 38 0.31
UniRef50_Q8QLD4 Cluster: CG30; n=3; Nucleopolyhedrovirus|Rep: CG... 37 0.54
UniRef50_A0BC91 Cluster: Chromosome undetermined scaffold_10, wh... 36 0.94
UniRef50_Q7S1N9 Cluster: Predicted protein; n=2; Sordariomycetes... 36 0.94
UniRef50_A0BRC7 Cluster: Chromosome undetermined scaffold_122, w... 36 1.2
UniRef50_UPI00006CD331 Cluster: hypothetical protein TTHERM_0027... 35 1.6
UniRef50_Q95XU0 Cluster: Putative uncharacterized protein; n=1; ... 35 1.6
UniRef50_Q21641 Cluster: Putative uncharacterized protein R02E12... 34 2.9
UniRef50_O16616 Cluster: Putative uncharacterized protein; n=2; ... 34 2.9
UniRef50_UPI0000D557CB Cluster: PREDICTED: similar to ubiquitin-... 34 3.8
UniRef50_A5KNN5 Cluster: Putative uncharacterized protein; n=1; ... 34 3.8
UniRef50_A5KA47 Cluster: Putative uncharacterized protein; n=1; ... 33 5.0
UniRef50_Q20323 Cluster: Putative uncharacterized protein; n=1; ... 33 6.6
UniRef50_Q5I3L9 Cluster: Aec44; n=1; Escherichia coli|Rep: Aec44... 33 8.8
UniRef50_A6LT35 Cluster: Putative uncharacterized protein; n=1; ... 33 8.8
UniRef50_Q54MP5 Cluster: Putative uncharacterized protein; n=1; ... 33 8.8
UniRef50_Q1L721 Cluster: E3 ubiquitin-protein ligase RNF138; n=4... 33 8.8
>UniRef50_Q90173 Cluster: Zinc finger protein CG30; n=5;
Nucleopolyhedrovirus|Rep: Zinc finger protein CG30 -
Bombyx mori nuclear polyhedrosis virus (BmNPV)
Length = 266
Score = 305 bits (749), Expect = 6e-82
Identities = 147/160 (91%), Positives = 148/160 (92%)
Frame = +1
Query: 214 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCP 393
MEFVKLQCNICFSVAEIKNYFMQPIDRLT+IPVLELDTCKHQLCSMC PCP
Sbjct: 1 MEFVKLQCNICFSVAEIKNYFMQPIDRLTMIPVLELDTCKHQLCSMCIRKIRKRKKTPCP 60
Query: 394 LCRVESLHFNVYSINRNVVDVIKCSVTSVAQWNKINDNFDAASLASVLFEKSLLDDAEDS 573
LCRVESLHFNVYSINRNVVDVIKCSVTSVAQWNKIN NFDAASLASVLFEKSLLDDAEDS
Sbjct: 61 LCRVESLHFNVYSINRNVVDVIKCSVTSVAQWNKINGNFDAASLASVLFEKSLLDDAEDS 120
Query: 574 NNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLN 693
NNAANSDDTMLSESQAILKKLQ DIAEQTQLNIKRQLDLN
Sbjct: 121 NNAANSDDTMLSESQAILKKLQADIAEQTQLNIKRQLDLN 160
>UniRef50_O10339 Cluster: Zinc finger protein CG30; n=7;
Nucleopolyhedrovirus|Rep: Zinc finger protein CG30 -
Orgyia pseudotsugata multicapsid polyhedrosis virus
(OpMNPV)
Length = 249
Score = 148 bits (359), Expect = 1e-34
Identities = 75/160 (46%), Positives = 101/160 (63%), Gaps = 3/160 (1%)
Frame = +1
Query: 214 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMC---XXXXXXXXXX 384
M+ V+LQC+IC SV EIKNYF+QP+D +TI+P++EL TC+HQLC MC
Sbjct: 1 MDTVRLQCHICCSVGEIKNYFLQPVDAITILPIVELHTCRHQLCVMCVRKIAQRGRDKRV 60
Query: 385 PCPLCRVESLHFNVYSINRNVVDVIKCSVTSVAQWNKINDNFDAASLASVLFEKSLLDDA 564
CP+CR ++ HFNVYS+NRN VDV++CSV V + + DAASLA LFE SLL+
Sbjct: 61 ECPMCRRKNAHFNVYSVNRNSVDVLRCSVADVREHGRFGGLADAASLARGLFEPSLLEAE 120
Query: 565 EDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQL 684
+N+ +E Q +LK+L+ I QT+ N QL
Sbjct: 121 PAPDNSFGP-----NELQLVLKRLKAQIEAQTRTNYDLQL 155
>UniRef50_A0EYX0 Cluster: Cg30; n=1; Ecotropis obliqua NPV|Rep: Cg30
- Ecotropis obliqua NPV
Length = 269
Score = 64.5 bits (150), Expect = 2e-09
Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 2/150 (1%)
Frame = +1
Query: 214 MEFVKLQCNICFSVAEIKNYFMQPIDRLTII-PVLELDTCKHQLCSMCXXXXXXXXXXPC 390
M V L CNIC+S+ +I++ + I P+ L C H LC C C
Sbjct: 1 MTSVTLNCNICYSLTKIESVPSSNTKNVMYIYPLTVLSMCLHTLCFTCVSKLAKGKELKC 60
Query: 391 PLCRVESLHFNVYSINRNVVDVIKCSVTSVAQWNKINDNFDAASLASVLFEKSLLDDAED 570
P CR + V+++NR + V A N+ N + D A +LFE S++D+ ++
Sbjct: 61 PFCRTINTKVRVHAVNRCEITSFHVGVNVFATRNE-NIDIDCVEFAKILFECSVVDENDE 119
Query: 571 SNNAANSD-DTMLSESQAILKKLQIDIAEQ 657
+ + +L + L + + A Q
Sbjct: 120 KMDKEEEEAQKLLQNNNLFLMDVNVSNANQ 149
>UniRef50_Q0N424 Cluster: Cg30/ac88-like protein; n=1; Clanis
bilineata nucleopolyhedrosis virus|Rep: Cg30/ac88-like
protein - Clanis bilineata nucleopolyhedrosis virus
Length = 346
Score = 63.7 bits (148), Expect = 4e-09
Identities = 31/132 (23%), Positives = 60/132 (45%)
Frame = +1
Query: 217 EFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCPL 396
E V L C +C S + I + + D + P+ +L +C H +C +C CPL
Sbjct: 39 EQVTLSCCVCLSESTINDTKDELDDNMFAFPLAQLVSCLHSICVVCAVSLKQRQVISCPL 98
Query: 397 CRVESLHFNVYSINRNVVDVIKCSVTSVAQWNKINDNFDAASLASVLFEKSLLDDAEDSN 576
CR +S ++++N+ + ++ +T + + + + A LFE S+ A S
Sbjct: 99 CRTQSNKLVLFNVNKQTLMGVQVPITLIKSYGRYANRISTVECAKKLFETSIATSATPST 158
Query: 577 NAANSDDTMLSE 612
+ ++ T+ E
Sbjct: 159 SKTSNIGTVTYE 170
>UniRef50_Q77K64 Cluster: Cg30 protein; n=3;
Nucleopolyhedrovirus|Rep: Cg30 protein - Helicoverpa
armigera NPV
Length = 283
Score = 62.9 bits (146), Expect = 7e-09
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Frame = +1
Query: 214 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCP 393
M + + C +C A I N Q L ++P++ L +C H LC+MC CP
Sbjct: 1 MNSITVNCCVCLGRATIYNNDQQ---ELLVLPLIVLQSCLHALCTMCLKRMRKSLIVKCP 57
Query: 394 LCRVESLHFNVYSINRNVVDV-----------IKCSVTSVAQWNKINDNFDAASLASVLF 540
LCR ++ ++ Y I+ N V+V +KC S+ N D SLA ++
Sbjct: 58 LCRSINIKYSYYCISGNTVNVVSTMSSTDIEEVKCPNISLTSANDTVQTIDIVSLAKDIY 117
Query: 541 EKSLL-DDAEDSNNAANSDDTMLSESQAILKKL 636
+ S+ +D+ + N + D+++++ +++L
Sbjct: 118 KSSVTSEDSGVTTNDNTAYDSIIADQNKHIEEL 150
>UniRef50_Q287I5 Cluster: CG30; n=1; Agrotis segetum
nucleopolyhedrovirus|Rep: CG30 - Agrotis segetum nuclear
polyhedrosis virus (AsNPV)
Length = 453
Score = 61.3 bits (142), Expect = 2e-08
Identities = 46/157 (29%), Positives = 66/157 (42%), Gaps = 5/157 (3%)
Frame = +1
Query: 214 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMC--XXXXXXXXXXP 387
ME V L C +C + +K + L I+P L L C H LC C
Sbjct: 8 MESVTLNCGVCLTDVLVKANETTRKENLYIVPFLSLIECNHALCVHCVKNLQTSNRRAIS 67
Query: 388 CPLCRVESLHFNVYSINRNVVDVIKCSVTSVAQW--NKINDNFDAASLASVLFEKSLL-D 558
CP+CR S F + SIN N + I C+ S+ + + N N + L S LF SL +
Sbjct: 68 CPMCREVSTKFRLISINNNELYTIDCTANSIQRHTSTQCNINMNIPMLVSHLFPFSLRPN 127
Query: 559 DAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLN 669
D D S +T + + A + + D A + N
Sbjct: 128 DDVDFITFEPSPNTNEASTSASVSTVYEDTASELYPN 164
>UniRef50_P17500 Cluster: Major capsid protein; n=15;
Nucleopolyhedrovirus|Rep: Major capsid protein - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 351
Score = 54.4 bits (125), Expect = 3e-06
Identities = 23/36 (63%), Positives = 30/36 (83%), Gaps = 1/36 (2%)
Frame = +2
Query: 2 DRTLSGYEEYPTYVPLFLGYQIINSENNFLR-NDFI 106
+RTL YEEYP YVPLFLGYQ++N +N+ LR N+F+
Sbjct: 281 ERTLGRYEEYPMYVPLFLGYQLVNLQNDILRANNFL 316
>UniRef50_Q9J861 Cluster: ORF76 cg30; n=1; Spodoptera exigua
MNPV|Rep: ORF76 cg30 - Spodoptera exigua MNPV
Length = 461
Score = 52.8 bits (121), Expect = 8e-06
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +1
Query: 214 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMC--XXXXXXXXXXP 387
ME + L C++C S EIK F ++ ++P+ LD CKH LC MC
Sbjct: 1 MESITLGCSVCMSEVEIKAGFGDVDPQMFVVPLFILDECKHVLCLMCCKSIQDGRRRAIT 60
Query: 388 CPLCRVES 411
CP CRV S
Sbjct: 61 CPTCRVSS 68
>UniRef50_A2EN30 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 990
Score = 42.3 bits (95), Expect = 0.011
Identities = 21/65 (32%), Positives = 38/65 (58%)
Frame = +1
Query: 469 VTSVAQWNKINDNFDAASLASVLFEKSLLDDAEDSNNAANSDDTMLSESQAILKKLQIDI 648
V S++Q + + N A S+ S+ E+ ++D ED N + +D +S + ILKK +D+
Sbjct: 924 VVSISQCSNVGYNSQAVSI-SIKGEEEEINDEEDGNAEESEEDIDISNIEEILKKYNVDL 982
Query: 649 AEQTQ 663
E++Q
Sbjct: 983 EEESQ 987
>UniRef50_A5IZX6 Cluster: Cg30-2; n=1; Spodoptera litura
granulovirus|Rep: Cg30-2 - Spodoptera litura
granulovirus
Length = 360
Score = 37.9 bits (84), Expect = 0.23
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +1
Query: 220 FVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCPLC 399
F L+C +C + E F+ + + +IP+L + C H LC+ C CP C
Sbjct: 4 FTILKCPVCLNKCEAD--FVSE-NTVKLIPMLTIAECNHHLCAACLYSIANNYEITCPTC 60
Query: 400 R 402
R
Sbjct: 61 R 61
>UniRef50_A1YJ68 Cluster: Cg30; n=1; Spodoptera frugiperda MNPV|Rep:
Cg30 - Spodoptera frugiperda nuclear polyhedrosis virus
(SfNPV)
Length = 458
Score = 37.5 bits (83), Expect = 0.31
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +1
Query: 214 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCP 393
M+ V +QC +C I + ++ + ++P L+L+ C H +C C CP
Sbjct: 1 MDLVTIQCIVCLVETTIDH---TKVEEVFVVPFLKLNNCNHVMCVDC--IKNMTTPLSCP 55
Query: 394 LCRVESL 414
+CR S+
Sbjct: 56 VCRRVSI 62
>UniRef50_Q8QLD4 Cluster: CG30; n=3; Nucleopolyhedrovirus|Rep: CG30
- Mamestra configurata NPV-A
Length = 279
Score = 36.7 bits (81), Expect = 0.54
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 214 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMC 354
M+ V +QCNIC +K D + I+P+L L C H C C
Sbjct: 1 MKSVTIQCNICLEQVVVKK--PDDEDFMYIVPLLTLTACNHHYCVEC 45
>UniRef50_A0BC91 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_10,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 222
Score = 35.9 bits (79), Expect = 0.94
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 310 VLELDTCKHQLCSMCXXXXXXXXXXPCPLCRVE 408
V E+D CKHQ+C C CP CR +
Sbjct: 87 VCEIDVCKHQICLTCIKEWAEKYKTQCPYCRAK 119
>UniRef50_Q7S1N9 Cluster: Predicted protein; n=2;
Sordariomycetes|Rep: Predicted protein - Neurospora
crassa
Length = 621
Score = 35.9 bits (79), Expect = 0.94
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +1
Query: 511 DAASLASVLFEKSLLDDAEDSNNAANSD--DTMLSESQAILKKLQIDIAEQTQLNIKRQL 684
D A+ AS++ L+DAED N AN+D + + QA ++ L +A+QT NI+ L
Sbjct: 466 DIAAAASLVPLPDDLEDAEDDNGTANTDKKKAITEQKQAYMRHL-FSVAQQTGTNIRSYL 524
>UniRef50_A0BRC7 Cluster: Chromosome undetermined scaffold_122, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_122, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 1405
Score = 35.5 bits (78), Expect = 1.2
Identities = 25/77 (32%), Positives = 40/77 (51%)
Frame = +1
Query: 415 HFNVYSINRNVVDVIKCSVTSVAQWNKINDNFDAASLASVLFEKSLLDDAEDSNNAANSD 594
HF SI++N+ D++ + T VA+++ IN + + V + + D +D N
Sbjct: 962 HFGQESIDQNIDDIL--NNTRVAKYSLINGAYTISKQTYVPDQANQQIDIDDPNFWQKVL 1019
Query: 595 DTMLSESQAILKKLQID 645
S+SQ ILKKLQ D
Sbjct: 1020 KNQESKSQKILKKLQED 1036
>UniRef50_UPI00006CD331 Cluster: hypothetical protein TTHERM_00275830;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00275830 - Tetrahymena thermophila SB210
Length = 1464
Score = 35.1 bits (77), Expect = 1.6
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +1
Query: 454 VIKCSVTSVAQWNKINDNFDAASLASVLFEKSLLDDAEDSNNAANSDDTMLSESQAILKK 633
+I CS S+ + +K + N+DA + S E++LL+ +E N+ N + M Q++ K
Sbjct: 1273 LIACSKQSIQEISKKSQNYDAQNNQSYNIEETLLESSEIQNDQIN-ETFMNHFEQSLFKS 1331
Query: 634 LQI-DIAEQTQLN 669
++I +I +Q N
Sbjct: 1332 IKIQNINKQNSQN 1344
>UniRef50_Q95XU0 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 374
Score = 35.1 bits (77), Expect = 1.6
Identities = 19/73 (26%), Positives = 29/73 (39%)
Frame = +1
Query: 214 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCP 393
M KL +CF ++ +P D ++PV L C H +C +C CP
Sbjct: 1 MNLEKLSELLCFQCGKLYESITKPDDEAILVPV--LGACLHSICILC--ATGLESPNSCP 56
Query: 394 LCRVESLHFNVYS 432
+C N+ S
Sbjct: 57 ICENPEAFGNIIS 69
>UniRef50_Q21641 Cluster: Putative uncharacterized protein R02E12.4;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein R02E12.4 - Caenorhabditis elegans
Length = 639
Score = 34.3 bits (75), Expect = 2.9
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +1
Query: 214 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCP 393
+EF +QC+ICF V N+ +P+ L TCKH +C+ C CP
Sbjct: 19 LEFEDVQCHICFQV----NH--EPVTFL---------TCKHSICAGCAGRWLSSCSV-CP 62
Query: 394 LC--RVESLHFN 423
+C RV +H N
Sbjct: 63 MCRTRVREIHLN 74
>UniRef50_O16616 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 292
Score = 34.3 bits (75), Expect = 2.9
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +1
Query: 328 CKHQLCSMCXXXXXXXXXXPCPLCR--VESLHFNVYSINRN--VVDVIKCSVTSVAQWNK 495
C H LC C CP CR E +N+ S+++N ++ +IK VT + K
Sbjct: 28 CSHTLCEGCIKKLLKNGRVVCPFCREPTEVPVYNIKSLHKNFSLIQMIKI-VTKTTEVEK 86
Query: 496 INDNF 510
DNF
Sbjct: 87 NWDNF 91
>UniRef50_UPI0000D557CB Cluster: PREDICTED: similar to
ubiquitin-like, containing PHD and RING finger domains,
1; n=1; Tribolium castaneum|Rep: PREDICTED: similar to
ubiquitin-like, containing PHD and RING finger domains,
1 - Tribolium castaneum
Length = 715
Score = 33.9 bits (74), Expect = 3.8
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 328 CKHQLCSMCXXXXXXXXXXPCPLCRVESLHFNVYSINRNVVDVIK 462
CKH +C C CP CR E V ++N N+ +V++
Sbjct: 661 CKHNVCKGCLKRSFAAEIYVCPCCRFELGETYVMTVNDNLGEVLR 705
>UniRef50_A5KNN5 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus torques ATCC 27756|Rep: Putative
uncharacterized protein - Ruminococcus torques ATCC
27756
Length = 842
Score = 33.9 bits (74), Expect = 3.8
Identities = 18/68 (26%), Positives = 36/68 (52%)
Frame = +1
Query: 430 SINRNVVDVIKCSVTSVAQWNKINDNFDAASLASVLFEKSLLDDAEDSNNAANSDDTMLS 609
S+N ++ ++ + ++A + ++ +NF+AA+ S A +AA+S + LS
Sbjct: 189 SVNSDITKTLEKADANIAAYKQLLENFNAAAEKSAPLITRAKSTASSLKSAASSGSSALS 248
Query: 610 ESQAILKK 633
ES IL +
Sbjct: 249 ESSRILSE 256
>UniRef50_A5KA47 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 3475
Score = 33.5 bits (73), Expect = 5.0
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +1
Query: 535 LFEKSLLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLN 693
L K +A++ N SD ++QA KK QID +QTQ+ K++ ++
Sbjct: 3327 LKRKLAAKNAQEKKNQMGSDPNHDGDNQASKKKTQIDAKKQTQIEAKKKTHID 3379
>UniRef50_Q20323 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 712
Score = 33.1 bits (72), Expect = 6.6
Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 2/105 (1%)
Frame = +1
Query: 214 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCP 393
+ FV L C+ C S+ + +F R + +C H LCS C CP
Sbjct: 22 LHFVSLVCSGCDSLGDRDRFFDNDKKRPCV------SSCNHSLCSQC-----FDKFTECP 70
Query: 394 LCRVESLHFNVYSINRNVVDVIKCSVTSVAQ--WNKINDNFDAAS 522
+C+ + Y R +V+ K + T + + WN + + S
Sbjct: 71 ICKEPLVRSENYQA-RKIVEHFKENPTMIIEKWWNSTANGSETCS 114
>UniRef50_Q5I3L9 Cluster: Aec44; n=1; Escherichia coli|Rep: Aec44 -
Escherichia coli
Length = 420
Score = 32.7 bits (71), Expect = 8.8
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 487 WNKINDNFDAASLASVLFEKSLLDDAEDSNNAANSDDTMLSESQAILK 630
WN I N + SL + + +DD SNN NS L+ QA L+
Sbjct: 133 WNSIGRNMEVGSLHGNIGSQIEIDDVRWSNNKKNSGKFKLATIQAFLR 180
>UniRef50_A6LT35 Cluster: Putative uncharacterized protein; n=1;
Clostridium beijerinckii NCIMB 8052|Rep: Putative
uncharacterized protein - Clostridium beijerinckii NCIMB
8052
Length = 307
Score = 32.7 bits (71), Expect = 8.8
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +1
Query: 415 HFNV-YSINRNVVDVIKCSVTSVAQWNKINDNFDAASLAS-VLFEKSLLDDAEDSNNAAN 588
+FN+ YS N N+ ++ C + Q I+ + +SL S +L +LD ++D+ N +
Sbjct: 139 NFNLLYSSNNNIFGILDCKNSKTPQCYSISSSEGLSSLNSFMLINNDILDTSKDNTNLPS 198
Query: 589 SD 594
D
Sbjct: 199 LD 200
>UniRef50_Q54MP5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 146
Score = 32.7 bits (71), Expect = 8.8
Identities = 13/61 (21%), Positives = 41/61 (67%)
Frame = +1
Query: 397 CRVESLHFNVYSINRNVVDVIKCSVTSVAQWNKINDNFDAASLASVLFEKSLLDDAEDSN 576
C+V++ ++N + ++ ++ +C+V S + N I++N+D +++ +K+++++ +DS+
Sbjct: 69 CKVDTTNYNEQQQSGDIHNLYQCTVLSDSYENSISENYD-----TIIDKKTIINNDDDSS 123
Query: 577 N 579
+
Sbjct: 124 S 124
>UniRef50_Q1L721 Cluster: E3 ubiquitin-protein ligase RNF138; n=4;
Xenopus|Rep: E3 ubiquitin-protein ligase RNF138 -
Xenopus laevis (African clawed frog)
Length = 222
Score = 32.7 bits (71), Expect = 8.8
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +1
Query: 256 AEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCPLCR 402
+EI F+ P+ + + + TC+H C C CPLCR
Sbjct: 9 SEITEEFLCPVCQEILQTPVRTQTCRHVFCRKCFMLAMKSGGAYCPLCR 57
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,488,237
Number of Sequences: 1657284
Number of extensions: 9665234
Number of successful extensions: 27928
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 26856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27894
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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