Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1b19
         (701 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   7.4  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   7.4  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   7.4  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   7.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.7  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   9.7  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = -3

Query: 387 TPGAWPGCRCPGYISAGGSGSQCYWSASAAAYVRE 283
           TP   P C     + + GSG Q   ++ +  +++E
Sbjct: 136 TPNVTPNCDVKSSVCSPGSGHQDSRTSPSGQHLQE 170


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = -3

Query: 387 TPGAWPGCRCPGYISAGGSGSQCYWSASAAAYVRE 283
           TP   P C     + + GSG Q   ++ +  +++E
Sbjct: 136 TPNVTPNCDVKSSVCSPGSGHQDSRTSPSGQHLQE 170


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = +3

Query: 186 MDENKAETMYLRAVPDDVNGEAKDSAAEENYDPHEHRQLPKPTNNIE 326
           +D+ + ET+ ++     V  EA+  A + + DP    +  KP   I+
Sbjct: 34  VDDARFETLVVKQTKQSVLDEARLRANDSSVDPEIDIE-DKPAQKID 79


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = -3

Query: 387 TPGAWPGCRCPGYISAGGSGSQCYWSASAAAYVRE 283
           TP   P C     + + GSG Q   ++ +  +++E
Sbjct: 136 TPNVTPNCDVKSSVCSPGSGHQDSRTSPSGQHLQE 170


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 605 LPRCLPARHLLCIHRIHRGQHQ 670
           LP  + A H+L    +H+G+ Q
Sbjct: 168 LPNVILACHMLSFLMVHQGETQ 189


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/35 (28%), Positives = 12/35 (34%)
 Frame = -2

Query: 445 TRTPMSTVNTMPVTRPARANAWGMARMPVPRLHFS 341
           T +  STV T         N W +   P P    S
Sbjct: 303 TYSTWSTVQTPTTVMSPTINCWSLTSSPPPPYQIS 337


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,628
Number of Sequences: 336
Number of extensions: 2855
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)