Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1b19
(701 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0264 + 27263562-27264830 49 4e-06
04_04_0819 - 28312667-28313219,28315157-28316430 45 7e-05
06_03_0915 - 25929433-25930893 44 1e-04
06_03_0842 + 25307509-25308049,25308507-25308659,25308770-253089... 39 0.004
07_01_0882 + 7342606-7342842,7343601-7344245,7344515-7344907 37 0.013
02_01_0681 - 5059082-5059217,5059318-5059783,5059869-5060072,506... 37 0.013
02_05_0601 - 30278455-30278572,30280211-30280676,30280748-302809... 36 0.041
06_01_1136 + 9407282-9407663,9408075-9408227,9408336-9408539,940... 35 0.054
03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434 33 0.22
04_04_0338 + 24509698-24510042,24510373-24510490,24510539-245106... 31 0.67
01_05_0586 + 23443371-23444645 31 0.89
06_03_0442 + 20837492-20837621,20841842-20842075,20842435-208425... 31 1.2
09_03_0026 + 11681797-11681961,11684238-11684318,11685798-11686142 30 1.5
12_01_0599 - 4892146-4893552 30 2.0
07_03_1302 + 25618621-25620495 30 2.0
07_01_0248 - 1821340-1821996,1823619-1823761,1824239-1824453,182... 30 2.0
06_01_0996 + 7746358-7746493,7747102-7747262,7747586-7747647,774... 30 2.0
04_04_1451 + 33695734-33695806,33695946-33696179,33696341-336964... 30 2.0
06_03_1346 + 29480482-29480676,29480754-29481067,29481164-294812... 29 2.7
05_03_0089 - 8327044-8327142,8327238-8327306,8327413-8327504,832... 29 2.7
02_01_0008 - 50576-50671,50767-50829,50918-50961,51048-51129,522... 29 2.7
11_02_0038 - 7631462-7634428,7635975-7636250 29 3.6
08_02_0648 - 19694538-19696569,19697151-19697998 29 3.6
03_02_0512 - 9021961-9022428 29 3.6
06_01_0872 + 6687849-6687864,6689622-6690235,6690927-6691478 29 4.7
01_06_1569 - 38304077-38304873,38304956-38305498,38305582-38305708 29 4.7
01_06_1541 - 38127014-38128022,38128116-38128209,38128302-381285... 29 4.7
09_02_0057 - 3697255-3698116,3698191-3698351,3698442-3698636,369... 28 8.3
07_01_1093 + 10033403-10033984 28 8.3
02_04_0467 + 23161572-23162757,23162856-23163418 28 8.3
02_04_0407 + 22645775-22645865,22645998-22646269 28 8.3
>02_05_0264 + 27263562-27264830
Length = 422
Score = 48.8 bits (111), Expect = 4e-06
Identities = 33/128 (25%), Positives = 60/128 (46%)
Frame = +3
Query: 306 KPTNNIETLIHLLKCSLGTGILAMPQAFARAGLVTGIVFTVLIGVLVTHCLHVLVRSQYA 485
K ++ +T ++ +G G+L +P F+R G G + + + L +C+ +LV
Sbjct: 31 KLSSQPKTFANVFIAVVGAGVLGLPYTFSRTGWAAGSILLLSVAALTFYCMMLLV----- 85
Query: 486 ACKHLRVPLLSYPASMAAALEVGPAPFRRLARPASITVXIFLVVYQLGICCVYIVFIADN 665
AC R L +A+ ++G A FR P + V LV+ Q C Y++FI++
Sbjct: 86 AC---RRRLADEHPKIASFGDLGDAVFR---GPGRLAVDTMLVLSQASFCVGYLIFISNT 139
Query: 666 IKKIVDPF 689
+ + F
Sbjct: 140 MAHLYPVF 147
>04_04_0819 - 28312667-28313219,28315157-28316430
Length = 608
Score = 44.8 bits (101), Expect = 7e-05
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Frame = +3
Query: 324 ETLIHLLKCSLGTGILAMPQAFARAGLVTGIVFTVLIGVLVTHCLHVLVRSQYAACKHLR 503
+T ++ +G+G+L +P F+R G V G V + + L HC+ +LV AC+ R
Sbjct: 39 KTFANVFIAVVGSGVLGLPYTFSRTGWVAGSVLLLAVAALTFHCMMLLV-----ACR--R 91
Query: 504 VPLLSYPASMAAALEVGPAPFRRLARPAS-ITVXIFLVVYQLGICCVYIVFIADNI 668
+P +A+ ++G A + PA V LV+ Q C Y++FI++ +
Sbjct: 92 RLAYDHP-KIASFGDLGAA----VCGPAGRHVVDAMLVLSQASFCVGYLIFISNTM 142
>06_03_0915 - 25929433-25930893
Length = 486
Score = 44.0 bits (99), Expect = 1e-04
Identities = 29/111 (26%), Positives = 50/111 (45%)
Frame = +3
Query: 330 LIHLLKCSLGTGILAMPQAFARAGLVTGIVFTVLIGVLVTHCLHVLVRSQYAACKHLRVP 509
+ +L +G GI+A+P G+ G+V +++G+L + +LVR
Sbjct: 80 VFNLATSIIGAGIMALPATMKVLGVAVGLVSILVMGILSEVTIELLVRF----------- 128
Query: 510 LLSYPASMAAALEVGPAPFRRLARPASITVXIFLVVYQLGICCVYIVFIAD 662
A AL G + L RPASI + +++ G+ VY++ I D
Sbjct: 129 -----AVYCRALSYGEVVHKALGRPASIVAQMCVIINNAGVLIVYLIIIGD 174
>06_03_0842 +
25307509-25308049,25308507-25308659,25308770-25308973,
25309056-25309521,25309614-25309746
Length = 498
Score = 38.7 bits (86), Expect = 0.004
Identities = 28/103 (27%), Positives = 51/103 (49%)
Frame = +3
Query: 354 LGTGILAMPQAFARAGLVTGIVFTVLIGVLVTHCLHVLVRSQYAACKHLRVPLLSYPASM 533
+G GI+A+P + G++ GI+ +++ +L + +LVR C H + + SY M
Sbjct: 96 VGAGIMALPASIKMLGIIPGILMIIVVALLTEASIDMLVR-----CSH-QGKITSYGWLM 149
Query: 534 AAALEVGPAPFRRLARPASITVXIFLVVYQLGICCVYIVFIAD 662
A + R+A AS+ V+ +G+ VY++ I D
Sbjct: 150 GEAY----GQWGRIALQASV------VINNIGVMIVYMIIIGD 182
>07_01_0882 + 7342606-7342842,7343601-7344245,7344515-7344907
Length = 424
Score = 37.1 bits (82), Expect = 0.013
Identities = 29/118 (24%), Positives = 52/118 (44%)
Frame = +3
Query: 324 ETLIHLLKCSLGTGILAMPQAFARAGLVTGIVFTVLIGVLVTHCLHVLVRSQYAACKHLR 503
+TL +++ +GTG+L +P AF AG V G + G +C+ +LV + +
Sbjct: 32 QTLGNVVVSIVGTGVLGLPYAFRTAGWVAGSLGVAAAGCATLYCMLLLVDCRDKL--EEK 89
Query: 504 VPLLSYPASMAAALEVGPAPFRRLARPASITVXIFLVVYQLGICCVYIVFIADNIKKI 677
+Y ++G F + R I ++V Q G Y++FI N+ +
Sbjct: 90 ESEETYHGHYTYG-DLGEKCFGTIGR---CLTEILILVSQAGGSVAYLIFIGQNLHSV 143
>02_01_0681 -
5059082-5059217,5059318-5059783,5059869-5060072,
5060163-5060315,5060849-5061269
Length = 459
Score = 37.1 bits (82), Expect = 0.013
Identities = 27/103 (26%), Positives = 49/103 (47%)
Frame = +3
Query: 354 LGTGILAMPQAFARAGLVTGIVFTVLIGVLVTHCLHVLVRSQYAACKHLRVPLLSYPASM 533
+G GI+A+P + G++ GI+ +L+ +L + +LVR C H + SY M
Sbjct: 56 VGAGIMALPASIKMLGIIPGILMIILVALLTEASIDMLVR-----CSH-EGKITSYGWLM 109
Query: 534 AAALEVGPAPFRRLARPASITVXIFLVVYQLGICCVYIVFIAD 662
+ R+A AS+ V+ +G+ VY++ + D
Sbjct: 110 GETF----GQWGRIALQASV------VINNIGMMIVYMIIVGD 142
>02_05_0601 -
30278455-30278572,30280211-30280676,30280748-30280951,
30281065-30281220,30281336-30281738
Length = 448
Score = 35.5 bits (78), Expect = 0.041
Identities = 36/136 (26%), Positives = 56/136 (41%)
Frame = +3
Query: 255 DSAAEENYDPHEHRQLPKPTNNIETLIHLLKCSLGTGILAMPQAFARAGLVTGIVFTVLI 434
D A ++D + N+ T I +G GI+A+P GLV G++ +L
Sbjct: 23 DDGAASSHDHFDGASFSGAVFNLSTTI------VGAGIMALPATMKVLGLVPGLILVMLA 76
Query: 435 GVLVTHCLHVLVRSQYAACKHLRVPLLSYPASMAAALEVGPAPFRRLARPASITVXIFLV 614
VL + +LVR A V SY +M A F R + + +V
Sbjct: 77 AVLTDASIELLVRFSRA------VGATSYGEAMGDA-------FGAFGRG---LLQLCVV 120
Query: 615 VYQLGICCVYIVFIAD 662
V +G+ VY++ I D
Sbjct: 121 VNNVGVMVVYMIIIGD 136
>06_01_1136 +
9407282-9407663,9408075-9408227,9408336-9408539,
9408709-9409174,9409434-9409575
Length = 448
Score = 35.1 bits (77), Expect = 0.054
Identities = 33/103 (32%), Positives = 48/103 (46%)
Frame = +3
Query: 354 LGTGILAMPQAFARAGLVTGIVFTVLIGVLVTHCLHVLVRSQYAACKHLRVPLLSYPASM 533
+G GI+A+P GL G+V +L +L + +LVRS AA P SY A M
Sbjct: 43 VGAGIMALPATMKVLGLAPGLVAILLAALLTDASIELLVRSSRAA----GAP--SYGAVM 96
Query: 534 AAALEVGPAPFRRLARPASITVXIFLVVYQLGICCVYIVFIAD 662
A RRL + + +VV +G+ VY++ I D
Sbjct: 97 GDAFGWWG---RRL-------LQVCVVVNNIGVMIVYMIIIGD 129
>03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434
Length = 418
Score = 33.1 bits (72), Expect = 0.22
Identities = 26/115 (22%), Positives = 52/115 (45%)
Frame = +3
Query: 324 ETLIHLLKCSLGTGILAMPQAFARAGLVTGIVFTVLIGVLVTHCLHVLVRSQYAACKHLR 503
+TL +++ +GTG+L +P AF +G + G + G +C+ +L+ + +
Sbjct: 20 QTLGNIVVSIVGTGVLGLPYAFRTSGWLAGALGVAGAGAATFYCMLLLLDCRDKLREQEE 79
Query: 504 VPLLSYPASMAAALEVGPAPFRRLARPASITVXIFLVVYQLGICCVYIVFIADNI 668
V + + ++G F + R + +++ Q G Y+VFI NI
Sbjct: 80 V---DHDGNYTYG-DLGEKCFGAIGR---YFTEVTIILSQTGGSVAYLVFIGQNI 127
>04_04_0338 +
24509698-24510042,24510373-24510490,24510539-24510642,
24510823-24511491
Length = 411
Score = 31.5 bits (68), Expect = 0.67
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 303 PKPTNNIETL-IHLLKCSLGTGILAMPQAFARAGLVTGIVFTVLIGVLVTHCLHVLV 470
P+ T + T H++ +G+G+L++ A+ G V G +L G ++ C +LV
Sbjct: 30 PRRTGTMWTASAHIITAVIGSGVLSLAWGVAQLGWVAGPAVMLLFGAVIYCCSVLLV 86
>01_05_0586 + 23443371-23444645
Length = 424
Score = 31.1 bits (67), Expect = 0.89
Identities = 29/117 (24%), Positives = 53/117 (45%)
Frame = +3
Query: 327 TLIHLLKCSLGTGILAMPQAFARAGLVTGIVFTVLIGVLVTHCLHVLVRSQYAACKHLRV 506
T ++L G G+L+MP A ++ G ++ ++F VL+G + + ++ R C
Sbjct: 42 TCLNLTNAVSGIGVLSMPYAVSQGGWLSLLLF-VLVGAVCYYTGTLIER-----CMRADG 95
Query: 507 PLLSYPASMAAALEVGPAPFRRLARPASITVXIFLVVYQLGICCVYIVFIADNIKKI 677
+ SYP ++G F R A V F+ V + ++V DN+ K+
Sbjct: 96 SIASYP-------DIGQYAFGATGRRA---VAFFMYVELYLVAISFLVLEGDNLDKL 142
>06_03_0442 +
20837492-20837621,20841842-20842075,20842435-20842528,
20842653-20842870,20842956-20843095,20843231-20843878
Length = 487
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 312 TNNIETL-IHLLKCSLGTGILAMPQAFARAGLVTGIVFTVLIGVLVTHCLHVLVRSQY 482
T N+ T H++ +G+G+L++ A A+ G V G V T+++ L+T+ L+ Y
Sbjct: 43 TGNVWTASAHIITAVIGSGVLSLAWATAQLGWVVGPV-TLMLFALITYYTSGLLADCY 99
>09_03_0026 + 11681797-11681961,11684238-11684318,11685798-11686142
Length = 196
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = -1
Query: 500 EVLASRVLRPHEHVEAVRDQDSDEHREH---YAGDEASASERLGHGQDAGAQAT 348
E L +LR HE+ + D H +H Y GD ASAS R H + QAT
Sbjct: 56 EKLYEWILRQHENGLRLTVADIASHIQHEIQYGGDNASASPRSQHASQS-TQAT 108
>12_01_0599 - 4892146-4893552
Length = 468
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 303 PKPTNNIETL-IHLLKCSLGTGILAMPQAFARAGLVTGIVFTVLIG 437
P+ T T H++ +G+G+L++P A A+ G V G V+ G
Sbjct: 28 PRRTGTFWTASAHIITAVIGSGVLSLPWATAQLGWVGGPAVMVVFG 73
>07_03_1302 + 25618621-25620495
Length = 624
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = -1
Query: 350 TFQQVDQGLNVIGRLRQLPMFVRVVVLFGCRVLCFTVD-IVRDSTKVHRLRFVLVHSDRL 174
TF V QGL IGR+RQ ++ GC V T + ++ +VH++R + D +
Sbjct: 329 TFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEM 388
Query: 173 SN 168
++
Sbjct: 389 TS 390
>07_01_0248 -
1821340-1821996,1823619-1823761,1824239-1824453,
1825911-1826049,1826152-1826385,1826504-1826624
Length = 502
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +3
Query: 336 HLLKCSLGTGILAMPQAFARAGLVTGIVFTVLIGVLVTHCLHVL 467
H++ +G+G+L++ A A+ G V G V V+ C +L
Sbjct: 49 HIITAVIGSGVLSLAWAIAQLGWVIGPAVLVAFSVITWFCSSLL 92
>06_01_0996 +
7746358-7746493,7747102-7747262,7747586-7747647,
7748142-7748595,7748994-7749134,7749444-7749633,
7749842-7750530,7750605-7750804,7751210-7751375,
7751850-7752046,7752162-7752396
Length = 876
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -1
Query: 695 RVERIHDLLDVVRDEYDVYTTDAELVDNEEDXYGDRGG 582
RV++ DL DV + + + D E+ D EED Y D G
Sbjct: 374 RVQQDEDL-DVTSSDDEDFVADEEVEDTEEDEYTDEDG 410
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = -1
Query: 446 DQDSDEHREHYAGDEASASERLGHGQDAGAQA--TFQQVDQGLNVIG 312
D+D E ++ G+E +R + D GA+ + +Q D NVIG
Sbjct: 415 DEDEGEEDDNDEGEEDDDEDRSENDDDDGAETGRSGEQADAATNVIG 461
>04_04_1451 +
33695734-33695806,33695946-33696179,33696341-33696434,
33696532-33696749,33696859-33696992,33697098-33697325,
33697417-33697845
Length = 469
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Frame = +3
Query: 303 PKPTNNIETLI-HLLKCSLGTGILAMPQAFARAGLVTGIV-------FTVLIGVLVTHC 455
P+ T N+ T + H++ +G G+LA+ + A+ G V G + T + L++HC
Sbjct: 21 PQRTGNLWTCVAHIITAVIGCGVLALSWSVAQLGWVAGPIAMVCFAFVTYISAFLLSHC 79
>06_03_1346 +
29480482-29480676,29480754-29481067,29481164-29481236,
29481517-29481627,29481725-29481899,29481992-29482119,
29482310-29482370,29482893-29482963
Length = 375
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Frame = -1
Query: 449 RDQDSDEHREHYAGDEASASERLGHGQDAGAQATFQQVDQGL--NVIGRL-RQLPMFVRV 279
R Q+S+ + +G+E + R G++ + Q+D G+ N+ L Q+ F+
Sbjct: 85 RKQESESDGDSGSGEEQNKRVRRAKGKEKDVASVAPQIDSGMFCNIPPELFLQIFKFLSS 144
Query: 278 VVLFGCRVLCFTVDIV-RDSTKVHRL 204
L C ++C +++V D T RL
Sbjct: 145 EDLISCALVCRFMNVVASDETLWRRL 170
>05_03_0089 -
8327044-8327142,8327238-8327306,8327413-8327504,
8327932-8329042
Length = 456
Score = 29.5 bits (63), Expect = 2.7
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 1/117 (0%)
Frame = +3
Query: 336 HLLKCSLGTGILAMPQAFARAGLVTGIVFTVLIGVLVTHCLHVLVRSQYAACKHLRVPLL 515
H + +G G+L +P A ++ G TG+ + + L LV L P
Sbjct: 48 HNVTAMVGAGVLGLPFAMSQLGWPTGVAAIASSFAITLYTLWQLV--------ELHEPAP 99
Query: 516 SYPASMAAALEVGPAPF-RRLARPASITVXIFLVVYQLGICCVYIVFIADNIKKIVD 683
E+G A F RRL + V + L+V Q+G VY+V +KK V+
Sbjct: 100 GGGKRFDRYHELGQAAFGRRLG--VCLIVPLQLIV-QVGTDIVYMVTGGQTLKKFVE 153
>02_01_0008 -
50576-50671,50767-50829,50918-50961,51048-51129,
52205-52371,52502-52654,52780-52960,53452-53540,
53599-53799,54804-55147,55397-55626
Length = 549
Score = 29.5 bits (63), Expect = 2.7
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 14/121 (11%)
Frame = +3
Query: 357 GTGILAMPQAFARAGLVTGIVFTVLIGVLVTHCLHVLVRSQYAACKHLRVPLLSYPASMA 536
G GIL+ P A + G + G+V L VL + VL+R C + L +YP
Sbjct: 198 GVGILSTPYAIKQGGWL-GLVILCLFAVLAWYT-GVLLRR----CLDSKEGLETYP---- 247
Query: 537 AALEVGPAPFRRLARPASITVXIF------------LVVY-QLGICCV-YIVFIADNIKK 674
++G A F R A +T + +++Y +L CC+ Y++ +DN+ K
Sbjct: 248 ---DIGHAAFGTTGRYAKMTALVLTLFPCMWLHYLQIILYIELYACCIEYLILESDNLSK 304
Query: 675 I 677
+
Sbjct: 305 L 305
>11_02_0038 - 7631462-7634428,7635975-7636250
Length = 1080
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -2
Query: 448 VTRTPMSTVNTMPVTRPARANAWGMARMPVPRLHFSRWIR 329
+ RTP T ++P +R++ G+ + VP LH R+ R
Sbjct: 10 IPRTPAVTAASLPPAAGSRSSCGGVVGVRVPNLHRQRFPR 49
>08_02_0648 - 19694538-19696569,19697151-19697998
Length = 959
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Frame = -1
Query: 332 QGLNVIGRLRQLPMF-----VRVVVLFGCRVLCFTVDIVRDSTKVHRLRFVLVHS 183
+ L+ G +Q+PM +RV+ L GC L + D +H+LR++ +HS
Sbjct: 564 RSLSAFGDCKQIPMLSSLQILRVLDLEGCNHLNEDNVRIEDIGSLHQLRYLCIHS 618
>03_02_0512 - 9021961-9022428
Length = 155
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 430 STVNTMPVTRPARANAWGMARMPVPRL 350
+T+ P + P+ AWG RMP+P L
Sbjct: 25 ATLRLEPPSTPSPTGAWGDGRMPIPLL 51
>06_01_0872 + 6687849-6687864,6689622-6690235,6690927-6691478
Length = 393
Score = 28.7 bits (61), Expect = 4.7
Identities = 26/109 (23%), Positives = 51/109 (46%)
Frame = +3
Query: 351 SLGTGILAMPQAFARAGLVTGIVFTVLIGVLVTHCLHVLVRSQYAACKHLRVPLLSYPAS 530
S G GIL+MP A ++ G ++ +F + + C + + Q C + +YP
Sbjct: 4 SQGVGILSMPYALSQGGWLSLAIFITIAAI----CFYTGILLQ--RCIDSSSLVKTYP-- 55
Query: 531 MAAALEVGPAPFRRLARPASITVXIFLVVYQLGICCVYIVFIADNIKKI 677
++G F R R A + ++L +Y + I +++ DN++K+
Sbjct: 56 -----DIGELAFGRKGRIA-VAAFMYLELYLVAI--DFLILEGDNLEKL 96
>01_06_1569 - 38304077-38304873,38304956-38305498,38305582-38305708
Length = 488
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 336 HLLKCSLGTGILAMPQAFARAGLVTGIVFTVLIGVLVTHCLHVLVRSQY 482
H++ +G+G+L++ A A+ G V G VL LVT+ L+ Y
Sbjct: 51 HIITAVIGSGVLSLGWAIAQLGWVAGPAVMVLFS-LVTYYTSSLLSDCY 98
>01_06_1541 -
38127014-38128022,38128116-38128209,38128302-38128535,
38128643-38128744,38130893-38130956
Length = 500
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +3
Query: 336 HLLKCSLGTGILAMPQAFARAGLVTGIVFTVLIGVLVTHCLHVLVRSQY 482
H + +G+G+LA+P + A+ G V G + +++ +T+ VL+ Y
Sbjct: 64 HAITAVIGSGVLALPWSVAQMGWVLGPI-ALVVCAYITYYTAVLLCDCY 111
>09_02_0057 -
3697255-3698116,3698191-3698351,3698442-3698636,
3698728-3699126,3699208-3699477,3700102-3700695
Length = 826
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -1
Query: 476 RPHEHVEAVRDQDSDEHREHYAGDEA-SASERLGHGQDAGAQA 351
R H+ D D R H+ DE S S R GH +D G ++
Sbjct: 36 RRHKRGGGGDDDDDRRRRRHHRDDEEESRSRRHGHHRDGGRRS 78
>07_01_1093 + 10033403-10033984
Length = 193
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -3
Query: 402 GQRERTPGAWPGCRCPGYISAGGSGSQCYWS 310
GQR +T G W G R G A G G QC W+
Sbjct: 158 GQRRKTTGGWAGRR--GGPGAEG-GRQCRWA 185
>02_04_0467 + 23161572-23162757,23162856-23163418
Length = 582
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 3/73 (4%)
Frame = -2
Query: 568 LKGAGPTSSAAAMEAGYDSRGTRRCLQ-AAYC--DRTSTWRQCVTRTPMSTVNTMPVTRP 398
++GAG S + A R R A C D STWR T VN T P
Sbjct: 454 MRGAGRGSPPLCLRAEGSGRPARLATSDAGGCRGDALSTWRLVSGSTMHVAVNATTTTTP 513
Query: 397 ARANAWGMARMPV 359
+R G+ + V
Sbjct: 514 SRDGGGGLLCLDV 526
>02_04_0407 + 22645775-22645865,22645998-22646269
Length = 120
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 381 GAWPGCRCPGYISAGG 334
G W GCRC GY GG
Sbjct: 82 GGWHGCRCCGYGYRGG 97
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,526,257
Number of Sequences: 37544
Number of extensions: 380975
Number of successful extensions: 1439
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1438
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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