Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1b15
         (722 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021215-1|AAX33363.1|  399|Drosophila melanogaster RH65810p pro...    31   2.1  
AE014298-2043|AAN09339.1|  541|Drosophila melanogaster CG9413-PB...    31   2.1  
AE014298-2042|AAF48379.2|  532|Drosophila melanogaster CG9413-PA...    31   2.1  

>BT021215-1|AAX33363.1|  399|Drosophila melanogaster RH65810p
           protein.
          Length = 399

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -3

Query: 267 TDLWRIEGWNR-SLSSHVIANPSQNLP 190
           T LW  +GWN  +  +  I NPS+NLP
Sbjct: 272 TGLWAYDGWNNLNYVTEEIKNPSKNLP 298


>AE014298-2043|AAN09339.1|  541|Drosophila melanogaster CG9413-PB,
           isoform B protein.
          Length = 541

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -3

Query: 267 TDLWRIEGWNR-SLSSHVIANPSQNLP 190
           T LW  +GWN  +  +  I NPS+NLP
Sbjct: 281 TGLWAYDGWNNLNYVTEEIKNPSKNLP 307


>AE014298-2042|AAF48379.2|  532|Drosophila melanogaster CG9413-PA,
           isoform A protein.
          Length = 532

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -3

Query: 267 TDLWRIEGWNR-SLSSHVIANPSQNLP 190
           T LW  +GWN  +  +  I NPS+NLP
Sbjct: 272 TGLWAYDGWNNLNYVTEEIKNPSKNLP 298


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,808,482
Number of Sequences: 53049
Number of extensions: 636865
Number of successful extensions: 1483
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1483
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)