Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1b15
         (722 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domai...    34   0.12 
L14745-9|AAK71355.2|  380|Caenorhabditis elegans Hypothetical pr...    29   2.5  
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p...    28   5.9  
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p...    28   5.9  
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin...    28   5.9  
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr...    28   5.9  
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr...    28   5.9  
AF125963-2|AAD14743.1|  463|Caenorhabditis elegans Hypothetical ...    28   5.9  

>U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domain
           protein protein 1 protein.
          Length = 709

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 14/58 (24%), Positives = 26/58 (44%)
 Frame = +3

Query: 510 CYLTNGDNRLYRCISQKCQVHHLRYCYRISRFDGHHSDDTVPAGIFPIIIRASLSCLE 683
           C+  N +N  Y C+  K + H+  YC  ++ F   +  +T P  +   +    +  LE
Sbjct: 603 CFCQNCNNNTYWCLRTKNETHNFLYCEFVTEFISFYDFNTDPDQLINAVYSLDIGVLE 660


>L14745-9|AAK71355.2|  380|Caenorhabditis elegans Hypothetical
           protein C02F5.12 protein.
          Length = 380

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = -3

Query: 291 CHFIRGGVTDLWRIEGWNRSLSSHVIANPSQNLPCQSNFR*INGVMRVGSHY 136
           C+F   G+   WR++     L  H + + ++ +PC+        V R+ SHY
Sbjct: 239 CNFPGCGLKYNWRVKYGKLRLLDHALTHSNRKIPCKLCGFECTNVRRMRSHY 290


>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
           protein 70, isoform a protein.
          Length = 2257

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 262 VGHSPSDEMAKRLGELKSYWTQLEDPLDER 351
           V H  SD++  R  +L + W QL D +D++
Sbjct: 908 VEHPNSDDILHRQNKLNARWAQLRDMVDQK 937


>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
           protein 70, isoform b protein.
          Length = 2302

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 262 VGHSPSDEMAKRLGELKSYWTQLEDPLDER 351
           V H  SD++  R  +L + W QL D +D++
Sbjct: 908 VEHPNSDDILHRQNKLNARWAQLRDMVDQK 937


>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
           protein.
          Length = 2257

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 262 VGHSPSDEMAKRLGELKSYWTQLEDPLDER 351
           V H  SD++  R  +L + W QL D +D++
Sbjct: 908 VEHPNSDDILHRQNKLNARWAQLRDMVDQK 937


>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
           protein.
          Length = 2257

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 262 VGHSPSDEMAKRLGELKSYWTQLEDPLDER 351
           V H  SD++  R  +L + W QL D +D++
Sbjct: 908 VEHPNSDDILHRQNKLNARWAQLRDMVDQK 937


>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
           protein.
          Length = 2302

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 262 VGHSPSDEMAKRLGELKSYWTQLEDPLDER 351
           V H  SD++  R  +L + W QL D +D++
Sbjct: 908 VEHPNSDDILHRQNKLNARWAQLRDMVDQK 937


>AF125963-2|AAD14743.1|  463|Caenorhabditis elegans Hypothetical
           protein Y38A10A.2 protein.
          Length = 463

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
 Frame = +1

Query: 190 REVLTGVGDYMTGQRPVPAFNPPEVGHSPSD-EMAKRLGELKSYWTQLEDPLDERILNTL 366
           ++V   VG+YM  +R    F+   +   PSD +++     LKS     +D + ER++   
Sbjct: 98  KDVRHTVGEYMKNERFCKVFSNTNLSGVPSDYDISNWAHSLKSDSCSDDDSVSERLIEQW 157

Query: 367 KAISILSGD 393
              SI + D
Sbjct: 158 AQFSIHNTD 166


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,542,437
Number of Sequences: 27780
Number of extensions: 314656
Number of successful extensions: 862
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)