Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1b14
         (680 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF525673-2|AAM82610.1|   58|Anopheles gambiae cecropin CecA prot...    25   1.7  
AF200686-1|AAF22649.1|   58|Anopheles gambiae cecropin precursor...    25   1.7  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    25   2.9  

>AF525673-2|AAM82610.1|   58|Anopheles gambiae cecropin CecA
           protein.
          Length = 58

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 16/30 (53%), Positives = 20/30 (66%)
 Frame = +1

Query: 514 QNYAGQLPLKKVGKKEEVADLILFLASEKA 603
           Q  AG+L  KK+GKK E A   +F A+EKA
Sbjct: 20  QTEAGRL--KKLGKKIEGAGKRVFKAAEKA 47


>AF200686-1|AAF22649.1|   58|Anopheles gambiae cecropin precursor
           protein.
          Length = 58

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 16/30 (53%), Positives = 20/30 (66%)
 Frame = +1

Query: 514 QNYAGQLPLKKVGKKEEVADLILFLASEKA 603
           Q  AG+L  KK+GKK E A   +F A+EKA
Sbjct: 20  QTEAGRL--KKLGKKIEGAGKRVFKAAEKA 47


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = -2

Query: 280 SNNYYISPFFSEHYRCC-CAYSSTGSCWIFQVEFVVCVGCPL 158
           +  YY +      Y C  C   + G+C     + V+C+ CP+
Sbjct: 758 AKGYYGNALGGTPYDCKRCPCPNNGACMQMAGDTVICLECPV 799


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 573,270
Number of Sequences: 2352
Number of extensions: 9538
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)