Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1b12
         (690 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119584-1|AAM50238.1|  534|Drosophila melanogaster LD14064p pro...   289   2e-78
AE014296-1373|AAS65055.1|  534|Drosophila melanogaster CG7942-PB...   289   2e-78
AE014296-1372|AAF50486.1|  534|Drosophila melanogaster CG7942-PA...   289   2e-78
AE013599-2544|AAF57805.1|  440|Drosophila melanogaster CG4984-PA...    30   2.6  
X51749-1|CAA36038.1|  687|Drosophila melanogaster protein ( Dros...    29   7.9  
AY119219-1|AAM51079.1|  440|Drosophila melanogaster SD16468p pro...    29   7.9  
AY119138-1|AAM50998.1|  696|Drosophila melanogaster RE37995p pro...    29   7.9  
AL133506-2|CAB65847.1|  687|Drosophila melanogaster EG:BACN33B1....    29   7.9  
AE014298-466|AAF45826.1|  687|Drosophila melanogaster CG2759-PA ...    29   7.9  
AE014297-4239|AAF56796.2|  696|Drosophila melanogaster CG12413-P...    29   7.9  
AE014134-1872|AAS64676.1|  205|Drosophila melanogaster CG33677-P...    29   7.9  
AB028139-3|BAA78210.1|  706|Drosophila melanogaster white protei...    29   7.9  

>AY119584-1|AAM50238.1|  534|Drosophila melanogaster LD14064p
           protein.
          Length = 534

 Score =  289 bits (709), Expect = 2e-78
 Identities = 128/190 (67%), Positives = 154/190 (81%)
 Frame = +2

Query: 119 MKIAVEGCAHGELDKIYDCIETLQEREGFKIDLLICCGDFQSVRNAADLRAMAVPEKYQR 298
           MKIAVEGCAHGEL++IYD IE +++  G KIDLL+CCGDFQS RN  DL+ MAVP+KY  
Sbjct: 1   MKIAVEGCAHGELERIYDTIEGIEKVGGTKIDLLLCCGDFQSTRNLEDLQTMAVPKKYLD 60

Query: 299 MCTFYKYYSGEKKAPVLTLFIGGNHEASNYLQELPYGGWVAPNIYYMGRAGVVKFGELRI 478
           MC+FYKYYSGE  APVLT+FIGGNHEASNYLQELPYGGWVAPNIYY+G AGVV    +RI
Sbjct: 61  MCSFYKYYSGELVAPVLTIFIGGNHEASNYLQELPYGGWVAPNIYYLGYAGVVNVNGVRI 120

Query: 479 GGLSGIFKGHDYLQGLWECLPYNQNSMRSVYHIRSLDVFRLSQLKEKLHVMLTHDWPRGI 658
            G+SGIFKGHD+L+G  E  PY  ++ RSVYH+R L+VFRL Q+  ++ + L+HDWP GI
Sbjct: 121 AGISGIFKGHDFLRGHHEFPPYTDSTCRSVYHVRQLEVFRLKQISGRVDIFLSHDWPTGI 180

Query: 659 TDYGDKDHLL 688
            +YG+K  LL
Sbjct: 181 YEYGNKAQLL 190


>AE014296-1373|AAS65055.1|  534|Drosophila melanogaster CG7942-PB,
           isoform B protein.
          Length = 534

 Score =  289 bits (709), Expect = 2e-78
 Identities = 128/190 (67%), Positives = 154/190 (81%)
 Frame = +2

Query: 119 MKIAVEGCAHGELDKIYDCIETLQEREGFKIDLLICCGDFQSVRNAADLRAMAVPEKYQR 298
           MKIAVEGCAHGEL++IYD IE +++  G KIDLL+CCGDFQS RN  DL+ MAVP+KY  
Sbjct: 1   MKIAVEGCAHGELERIYDTIEGIEKVGGTKIDLLLCCGDFQSTRNLEDLQTMAVPKKYLD 60

Query: 299 MCTFYKYYSGEKKAPVLTLFIGGNHEASNYLQELPYGGWVAPNIYYMGRAGVVKFGELRI 478
           MC+FYKYYSGE  APVLT+FIGGNHEASNYLQELPYGGWVAPNIYY+G AGVV    +RI
Sbjct: 61  MCSFYKYYSGELVAPVLTIFIGGNHEASNYLQELPYGGWVAPNIYYLGYAGVVNVNGVRI 120

Query: 479 GGLSGIFKGHDYLQGLWECLPYNQNSMRSVYHIRSLDVFRLSQLKEKLHVMLTHDWPRGI 658
            G+SGIFKGHD+L+G  E  PY  ++ RSVYH+R L+VFRL Q+  ++ + L+HDWP GI
Sbjct: 121 AGISGIFKGHDFLRGHHEFPPYTDSTCRSVYHVRQLEVFRLKQISGRVDIFLSHDWPTGI 180

Query: 659 TDYGDKDHLL 688
            +YG+K  LL
Sbjct: 181 YEYGNKAQLL 190


>AE014296-1372|AAF50486.1|  534|Drosophila melanogaster CG7942-PA,
           isoform A protein.
          Length = 534

 Score =  289 bits (709), Expect = 2e-78
 Identities = 128/190 (67%), Positives = 154/190 (81%)
 Frame = +2

Query: 119 MKIAVEGCAHGELDKIYDCIETLQEREGFKIDLLICCGDFQSVRNAADLRAMAVPEKYQR 298
           MKIAVEGCAHGEL++IYD IE +++  G KIDLL+CCGDFQS RN  DL+ MAVP+KY  
Sbjct: 1   MKIAVEGCAHGELERIYDTIEGIEKVGGTKIDLLLCCGDFQSTRNLEDLQTMAVPKKYLD 60

Query: 299 MCTFYKYYSGEKKAPVLTLFIGGNHEASNYLQELPYGGWVAPNIYYMGRAGVVKFGELRI 478
           MC+FYKYYSGE  APVLT+FIGGNHEASNYLQELPYGGWVAPNIYY+G AGVV    +RI
Sbjct: 61  MCSFYKYYSGELVAPVLTIFIGGNHEASNYLQELPYGGWVAPNIYYLGYAGVVNVNGVRI 120

Query: 479 GGLSGIFKGHDYLQGLWECLPYNQNSMRSVYHIRSLDVFRLSQLKEKLHVMLTHDWPRGI 658
            G+SGIFKGHD+L+G  E  PY  ++ RSVYH+R L+VFRL Q+  ++ + L+HDWP GI
Sbjct: 121 AGISGIFKGHDFLRGHHEFPPYTDSTCRSVYHVRQLEVFRLKQISGRVDIFLSHDWPTGI 180

Query: 659 TDYGDKDHLL 688
            +YG+K  LL
Sbjct: 181 YEYGNKAQLL 190


>AE013599-2544|AAF57805.1|  440|Drosophila melanogaster CG4984-PA
           protein.
          Length = 440

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +3

Query: 315 NITVGRRRHLY*HYLLVETMKLQTIYRSFR 404
           N T   RRH++ H++  E M+ QT+  +FR
Sbjct: 137 NFTESARRHMFAHWVRGEDMEFQTLRHAFR 166


>X51749-1|CAA36038.1|  687|Drosophila melanogaster protein (
           Drosophila white mRNAfor eye pigment. ).
          Length = 687

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
 Frame = +3

Query: 387 IYRSFRMVGGWLPIYTTW-DVLVLLSLEN*GLV--DYQEYSKGMITCKASGNVCPTT 548
           ++  F +  G +P+Y  W   L      N GL+   + +   G I+C +S   CP++
Sbjct: 586 LFGGFFLNSGSVPVYLKWLSYLSWFRYANEGLLINQWADVEPGEISCTSSNTTCPSS 642


>AY119219-1|AAM51079.1|  440|Drosophila melanogaster SD16468p
           protein.
          Length = 440

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +3

Query: 315 NITVGRRRHLY*HYLLVETMKLQTIYRSFR 404
           N T   RRH++ H++  E ++ QT+  +FR
Sbjct: 137 NFTESARRHMFAHWVRGEDIEFQTLRHAFR 166


>AY119138-1|AAM50998.1|  696|Drosophila melanogaster RE37995p
           protein.
          Length = 696

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 9/34 (26%), Positives = 20/34 (58%)
 Frame = +2

Query: 119 MKIAVEGCAHGELDKIYDCIETLQEREGFKIDLL 220
           + + ++G  HG ++ I D +ET    E  ++D++
Sbjct: 489 VSVIIKGDVHGSVEAILDVLETYNSNESCRLDIV 522


>AL133506-2|CAB65847.1|  687|Drosophila melanogaster
           EG:BACN33B1.1,FBgn0003996;w protein.
          Length = 687

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
 Frame = +3

Query: 387 IYRSFRMVGGWLPIYTTW-DVLVLLSLEN*GLV--DYQEYSKGMITCKASGNVCPTT 548
           ++  F +  G +P+Y  W   L      N GL+   + +   G I+C +S   CP++
Sbjct: 586 LFGGFFLNSGSVPVYLKWLSYLSWFRYANEGLLINQWADVEPGEISCTSSNTTCPSS 642


>AE014298-466|AAF45826.1|  687|Drosophila melanogaster CG2759-PA
           protein.
          Length = 687

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
 Frame = +3

Query: 387 IYRSFRMVGGWLPIYTTW-DVLVLLSLEN*GLV--DYQEYSKGMITCKASGNVCPTT 548
           ++  F +  G +P+Y  W   L      N GL+   + +   G I+C +S   CP++
Sbjct: 586 LFGGFFLNSGSVPVYLKWLSYLSWFRYANEGLLINQWADVEPGEISCTSSNTTCPSS 642


>AE014297-4239|AAF56796.2|  696|Drosophila melanogaster CG12413-PA
           protein.
          Length = 696

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 9/34 (26%), Positives = 20/34 (58%)
 Frame = +2

Query: 119 MKIAVEGCAHGELDKIYDCIETLQEREGFKIDLL 220
           + + ++G  HG ++ I D +ET    E  ++D++
Sbjct: 489 VSVIIKGDVHGSVEAILDVLETYNSNESCRLDIV 522


>AE014134-1872|AAS64676.1|  205|Drosophila melanogaster CG33677-PB,
           isoform B protein.
          Length = 205

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 23/108 (21%), Positives = 49/108 (45%)
 Frame = +2

Query: 314 KYYSGEKKAPVLTLFIGGNHEASNYLQELPYGGWVAPNIYYMGRAGVVKFGELRIGGLSG 493
           K  S E  +  L     G HE      EL    ++   I+     GVVK  ELR   +  
Sbjct: 42  KKSSSEVLSLALNKLTNGGHEIPPNFCELFTMVFLTMQIFLRYPKGVVKHHELRKCLMDD 101

Query: 494 IFKGHDYLQGLWECLPYNQNSMRSVYHIRSLDVFRLSQLKEKLHVMLT 637
           +    +Y++ + + L  +++ +   +    +D  ++S+L+ ++++ L+
Sbjct: 102 LNLTEEYVEDICKVLLNHRDVLSKNFSDTKMDRVKMSKLQWRINISLS 149


>AB028139-3|BAA78210.1|  706|Drosophila melanogaster white protein
           protein.
          Length = 706

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
 Frame = +3

Query: 387 IYRSFRMVGGWLPIYTTW-DVLVLLSLEN*GLV--DYQEYSKGMITCKASGNVCPTT 548
           ++  F +  G +P+Y  W   L      N GL+   + +   G I+C +S   CP++
Sbjct: 605 LFGGFFLNSGSVPVYLKWLSYLSWFRYANEGLLINQWADVEPGEISCTSSNTTCPSS 661


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,248,762
Number of Sequences: 53049
Number of extensions: 777920
Number of successful extensions: 2106
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2106
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)