Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1b04
(330 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41481 Cluster: P18 protein; n=12; Nucleopolyhedrovirus... 209 8e-54
UniRef50_Q0N420 Cluster: Ac93-like protein; n=3; Nucleopolyhedro... 97 9e-20
UniRef50_Q0IL20 Cluster: ORF99; n=14; Nucleopolyhedrovirus|Rep: ... 96 1e-19
UniRef50_Q6QXM2 Cluster: ORF82; n=2; Granulovirus|Rep: ORF82 - A... 61 4e-09
UniRef50_Q91EW3 Cluster: ORF92 similar to AcMNPV ORF93; n=3; Gra... 56 1e-07
UniRef50_Q8B4M7 Cluster: ORF92-like protein; n=1; Choristoneura ... 54 5e-07
UniRef50_Q8JRX5 Cluster: Putative uncharacterized protein PhopGV... 54 6e-07
UniRef50_A5IZT4 Cluster: Putative uncharacterized protein orf82;... 54 6e-07
UniRef50_Q7T9T7 Cluster: ORF_78; n=1; Adoxophyes orana granulovi... 48 5e-05
UniRef50_Q9PYU3 Cluster: ORF100; n=1; Xestia c-nigrum granulovir... 46 2e-04
UniRef50_O71120 Cluster: ORF503; n=1; Trichoplusia ni granulovir... 40 0.008
UniRef50_A7IS97 Cluster: Putative uncharacterized protein; n=1; ... 35 0.40
UniRef50_Q4N582 Cluster: Putative uncharacterized protein; n=2; ... 35 0.40
UniRef50_A0BC37 Cluster: Chromosome undetermined scaffold_1, who... 35 0.40
UniRef50_Q9LJE2 Cluster: Lysyl-tRNA synthetase; n=6; cellular or... 34 0.52
UniRef50_Q236S5 Cluster: TRNAHis guanylyltransferase family prot... 34 0.69
UniRef50_A2DBR6 Cluster: Putative uncharacterized protein; n=1; ... 34 0.69
UniRef50_A7JUK1 Cluster: Possible methyltransferase; n=3; Pasteu... 33 0.92
UniRef50_Q1RJ83 Cluster: Putative uncharacterized protein; n=2; ... 32 2.8
UniRef50_Q6LFK8 Cluster: DNA repair protein RAD50, putative; n=1... 32 2.8
UniRef50_A5IZF5 Cluster: Putative uncharacterized protein; n=1; ... 31 3.7
UniRef50_A6GWR8 Cluster: Phosphomethylpyrimidine kinase; n=1; Fl... 31 4.9
UniRef50_Q4J719 Cluster: Carbon monoxide dehydrogenase large cha... 31 4.9
UniRef50_UPI00006CAE6C Cluster: hypothetical protein TTHERM_0076... 31 6.5
UniRef50_A6CC48 Cluster: Putative uncharacterized protein; n=1; ... 31 6.5
UniRef50_A4TTZ1 Cluster: Cell division protein FtsQ; n=3; Magnet... 31 6.5
UniRef50_Q8WP99 Cluster: Normocyte-binding protein 1; n=11; Plas... 31 6.5
UniRef50_P32048 Cluster: Lysyl-tRNA synthetase, mitochondrial pr... 31 6.5
UniRef50_Q3ZXP7 Cluster: Hydrogenase subunit HymB; n=7; Bacteria... 30 8.5
UniRef50_Q18ZB9 Cluster: Flagellar biosynthetic protein FliR; n=... 30 8.5
UniRef50_A6QC01 Cluster: Anthranilate/para-aminobenzoate synthas... 30 8.5
UniRef50_Q8IJU7 Cluster: Putative uncharacterized protein; n=1; ... 30 8.5
UniRef50_Q7RCW9 Cluster: Lysyl-tRNA synthetase; n=5; Plasmodium ... 30 8.5
UniRef50_Q12YG4 Cluster: Putative uncharacterized protein; n=1; ... 30 8.5
>UniRef50_P41481 Cluster: P18 protein; n=12;
Nucleopolyhedrovirus|Rep: P18 protein - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 161
Score = 209 bits (511), Expect = 8e-54
Identities = 99/101 (98%), Positives = 100/101 (99%)
Frame = +1
Query: 1 ALFMKKVYKHLVLKNEGVFNKHHVLFDAMIMYKTYVNLVDESAFGSNVINYCEQFITAIF 180
ALFMKKVYKHLVLKNEG FNKHHVLFDAMIMYKTYV+LVDESAFGSNVINYCEQFITAIF
Sbjct: 61 ALFMKKVYKHLVLKNEGAFNKHHVLFDAMIMYKTYVHLVDESAFGSNVINYCEQFITAIF 120
Query: 181 EIFTLSSKIVVAVPVNWENDNLSVLLKHLHNLNLIGIEIVN 303
EIFTLSSKIVVAVPVNWENDNLSVLLKHLHNLNLIGIEIVN
Sbjct: 121 EIFTLSSKIVVAVPVNWENDNLSVLLKHLHNLNLIGIEIVN 161
>UniRef50_Q0N420 Cluster: Ac93-like protein; n=3;
Nucleopolyhedrovirus|Rep: Ac93-like protein - Clanis
bilineata nucleopolyhedrosis virus
Length = 171
Score = 96.7 bits (230), Expect = 9e-20
Identities = 47/99 (47%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Frame = +1
Query: 1 ALFMKKVYKHLVLKNEGVFNKHHVLFDAMIMYKTYVNLVDESAFGSNVINYCEQFITAIF 180
+L MKK L+ +G + K+HVL DA++MYKTYV LVDESAFG++++ C ++T IF
Sbjct: 72 SLLMKKTVYDLIEHADGNYCKNHVLIDALLMYKTYVELVDESAFGNDILESCVDYVTNIF 131
Query: 181 EIFTLSSKIVVAVP--VNWENDNLSVLLKHLHNLNLIGI 291
+F L S+I+V +P N DNLS +LKHL ++I I
Sbjct: 132 RLFRLQSRIIVVLPPHANLAQDNLSEVLKHLLQQSVIEI 170
>UniRef50_Q0IL20 Cluster: ORF99; n=14; Nucleopolyhedrovirus|Rep:
ORF99 - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 168
Score = 96.3 bits (229), Expect = 1e-19
Identities = 47/101 (46%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
Frame = +1
Query: 1 ALFMKKVYKHLVLKNEGVFNKHHVLFDAMIMYKTYVNLVDESAFGSNVINYCEQFITAIF 180
AL MKK L + G F K+H L DA++MYKT V+L+D+SA+ +NV+ CE +T +F
Sbjct: 66 ALLMKKACIDLKKHSSGNFFKYHALLDALLMYKTCVDLIDDSAWAANVLESCETLVTYMF 125
Query: 181 EIFTLSSKIVVAVP--VNWENDNLSVLLKHLHNLNLIGIEI 297
++FT S+IVV +P VN++ DNLS LL HL ++I +E+
Sbjct: 126 KLFTDRSQIVVIIPPEVNYQEDNLSALLNHLLQQSIISLEL 166
>UniRef50_Q6QXM2 Cluster: ORF82; n=2; Granulovirus|Rep: ORF82 -
Agrotis segetum granulosis virus (AsGV) (Agrotis
segetumgranulovirus)
Length = 167
Score = 61.3 bits (142), Expect = 4e-09
Identities = 29/101 (28%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Frame = +1
Query: 4 LFMKKVYKHLVLKNEGVFNKHHVLFDAMIMYKTY-VNLVDESAFGSNVINYCEQFITAIF 180
L +K++ H++ + G + ++HVL D ++MYK Y +++AFG+ C + + ++
Sbjct: 54 LLLKRLSDHILNRTSGNYFRNHVLLDVLVMYKKYNEEFGEDTAFGNECAQLCLEIVQLMY 113
Query: 181 EIFTLSSKIVVAVPVNWE-NDNLSVLLKHLHNLNLIGIEIV 300
E+F+ ++ IVV + + D +++LL HL I E V
Sbjct: 114 ELFSCTTNIVVLIESEADPEDEINLLLAHLERSKYIATEKV 154
>UniRef50_Q91EW3 Cluster: ORF92 similar to AcMNPV ORF93; n=3;
Granulovirus|Rep: ORF92 similar to AcMNPV ORF93 - Cydia
pomonella granulosis virus (CpGV) (Cydia
pomonellagranulovirus)
Length = 161
Score = 56.4 bits (130), Expect = 1e-07
Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 4/98 (4%)
Frame = +1
Query: 4 LFMKKVYKHLVLKNEGVFNKHHVLFDAMIMYKTYVNLVD--ESAFGSNVINYCEQFITAI 177
L ++K+ L+ EG + ++HVL DA+ +YK Y D +SAF +++ C + +
Sbjct: 56 LLLRKIKHDLLYSCEGNYCQNHVLLDALHLYKLYKEEFDDTQSAFDIDLMQTCREIVYLT 115
Query: 178 FEIFTLSSKIVVAV--PVNWENDNLSVLLKHLHNLNLI 285
FE+F+ ++ IVV V N++++ L+ LL L + N I
Sbjct: 116 FELFSCAANIVVFVHASANYKDNVLAQLLVELQSKNFI 153
>UniRef50_Q8B4M7 Cluster: ORF92-like protein; n=1; Choristoneura
fumiferana granulovirus|Rep: ORF92-like protein -
Choristoneura fumiferana granulovirus (CfGV)
Length = 140
Score = 54.4 bits (125), Expect = 5e-07
Identities = 28/98 (28%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Frame = +1
Query: 1 ALFMKKVYKHLVLKNEGVFNKHHVLFDAMIMYKTYVNLVD--ESAFGSNVINYCEQFITA 174
++ +K++ L+ N G + K+H+L D + ++ Y + D ESAF ++ C++ +
Sbjct: 34 SVLLKRLKHDLLHHNNGNYYKNHILLDILSLFSVYCDEFDNIESAFDIDLKVLCQEIVCT 93
Query: 175 IFEIFTLSSKIVVAVPVNWENDNLSVLLKH-LHNLNLI 285
+FE+F + I V + + +DN+ V+L H L L L+
Sbjct: 94 LFELFNCVTDITVYLKADLNDDNVIVILLHELQALELV 131
>UniRef50_Q8JRX5 Cluster: Putative uncharacterized protein
PhopGV084; n=1; Phthorimaea operculella
granulovirus|Rep: Putative uncharacterized protein
PhopGV084 - Phthorimaea operculella granulovirus
Length = 161
Score = 54.0 bits (124), Expect = 6e-07
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Frame = +1
Query: 4 LFMKKVYKHLVLKNEGVFNKHHVLFDAMIMYKTYVNLVDE--SAFGSNVINYCEQFITAI 177
L + K+ + LV G F +HH+L D + MYK Y + D+ SAF V C + +
Sbjct: 55 LMLYKLRQDLVENCHGTFYRHHILLDLLNMYKMYRDEFDDDTSAFDLGVCEICLDMVHTV 114
Query: 178 FEIFTLSSKIVVAVPVNW-ENDNLSVLLKHLHNLNLIGI 291
FE+F ++ I V V + END + LL L +I I
Sbjct: 115 FELFQCATDIFVFVESSANENDIIYELLNGLSERKIISI 153
>UniRef50_A5IZT4 Cluster: Putative uncharacterized protein orf82;
n=1; Spodoptera litura granulovirus|Rep: Putative
uncharacterized protein orf82 - Spodoptera litura
granulovirus
Length = 155
Score = 54.0 bits (124), Expect = 6e-07
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Frame = +1
Query: 1 ALFMKKVYKHLVLKNEGVFNKHHVLFDAMIMYKTYVN-LVDESAFGSNVINYCEQFITAI 177
+L M+K G F ++HVL D +++YK YV + SAFG +N C + +
Sbjct: 54 SLIMRKQNHDFANHCTGHFFRNHVLLDVLVLYKKYVQEFGNTSAFGKECVNACLDIVCCM 113
Query: 178 FEIFTLSSKIVVAVPVNWE-NDNLSVLLKHLHNLNLIGI 291
+E+F+ + I V V + + +D+L +LL +L + I I
Sbjct: 114 YELFSFIADINVYVRADTDPDDDLFILLTYLQSSEYITI 152
>UniRef50_Q7T9T7 Cluster: ORF_78; n=1; Adoxophyes orana
granulovirus|Rep: ORF_78 - Adoxophyes orana granulovirus
(AoGV)
Length = 164
Score = 47.6 bits (108), Expect = 5e-05
Identities = 23/97 (23%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Frame = +1
Query: 10 MKKVYKHLVLKNEGVFNKHHVLFDAMIMYKTYVNLVDE--SAFGSNVINYCEQFITAIFE 183
+K++ ++ + G F ++H+L + Y Y D+ S+F + ++ ++ ++ FE
Sbjct: 62 LKQLKNDMIERATGNFYRNHILLHMLNWYNDYCEEFDDFDSSFDNKIVEMTQELVSISFE 121
Query: 184 IFTLSSKIVVAVPVNW-ENDNLSVLLKHLHNLNLIGI 291
+F+ SK++V V + E+ N+ LL+ + + N+I +
Sbjct: 122 LFSCMSKVIVYVRYDADESHNIMGLLRKIESRNIINV 158
>UniRef50_Q9PYU3 Cluster: ORF100; n=1; Xestia c-nigrum
granulovirus|Rep: ORF100 - Xestia c-nigrum granulosis
virus (XnGV) (Xestia c-nigrumgranulovirus)
Length = 122
Score = 46.0 bits (104), Expect = 2e-04
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = +1
Query: 46 EGVFNKHHVLFDAMIMYKTYV-NLVDESAFGSNVINYCEQFITAIFEIFTL 195
EG F ++HVL D + +Y++YV D SAFG + + C + +++++FT+
Sbjct: 69 EGTFFRNHVLLDVLKLYESYVKEFKDRSAFGQDCVAQCIDIVYSVYQVFTV 119
>UniRef50_O71120 Cluster: ORF503; n=1; Trichoplusia ni
granulovirus|Rep: ORF503 - Trichoplusia ni granulosis
virus (TnGV) (Trichoplusia nigranulovirus)
Length = 68
Score = 40.3 bits (90), Expect = 0.008
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = +1
Query: 118 DESAFGSNVINYCEQFITAIFEIFTLSSKIVVAVPVNWENDN-LSVLLKHLHNLNLIGIE 294
D SAFG + + C + +++++F +S IVV V + + +N + VLL+ L + NL+ I+
Sbjct: 4 DRSAFGQDCVAQCIDIVYSVYQVFNRTSDIVVNVKQDIDANNVVYVLLEGLRSSNLVDIQ 63
Query: 295 IV 300
V
Sbjct: 64 KV 65
>UniRef50_A7IS97 Cluster: Putative uncharacterized protein; n=1;
Neisseria meningitidis|Rep: Putative uncharacterized
protein - Neisseria meningitidis
Length = 263
Score = 34.7 bits (76), Expect = 0.40
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +1
Query: 37 LKNEGVFNKHHVLFDAMIMYKTYVNLVDESAFGSNVINY 153
+ NEG F K+ LF I+YKTY+ + ++ SNV NY
Sbjct: 51 MSNEGKFEKNK-LFGLSILYKTYLEIDPKTISESNVANY 88
>UniRef50_Q4N582 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria parva
Length = 284
Score = 34.7 bits (76), Expect = 0.40
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = -2
Query: 284 MRFRLCKCFKSTLKLSFSQLTGTATTILLLS----VKISKMAVINCSQ*LITLLPNADSS 117
+RF L K T + S LT ATT+ LS VK +AVI+CS IT P
Sbjct: 114 LRFGLVKELPMTQRFSGIILTPLATTLFSLSDAEIVKNKGIAVIDCSWNKITQTPLNSFQ 173
Query: 116 TKFTYVLYIIIASNNT 69
T+ +L ++A N T
Sbjct: 174 TRNGRILPFLVAGNPT 189
>UniRef50_A0BC37 Cluster: Chromosome undetermined scaffold_1, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_1,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 273
Score = 34.7 bits (76), Expect = 0.40
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +1
Query: 118 DESAFGSNVINYCEQFITAIFEIFTLSSKIVVAVPVNWENDNLSVLLKHLHNLN 279
+E+ F SN+ NY Q I I E TLS KI E D LL++L ++N
Sbjct: 191 EETKFTSNIQNYGRQLIETIEEQVTLSDKINSNTANKKEGDKQPELLEYLISMN 244
>UniRef50_Q9LJE2 Cluster: Lysyl-tRNA synthetase; n=6; cellular
organisms|Rep: Lysyl-tRNA synthetase - Arabidopsis
thaliana (Mouse-ear cress)
Length = 602
Score = 34.3 bits (75), Expect = 0.52
Identities = 19/90 (21%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = +1
Query: 13 KKVYK-HLVLKNEGVFNKHHVLFDAMIMYKTYVNLVDESAFGSNVINYCEQFITAIFEIF 189
+KVY+ + +NEG+ +H+ F + MY+ Y + ++ C + I
Sbjct: 321 EKVYEIGRIFRNEGISTRHNPEFTTIEMYEAYSDYHSMMDMAELIVTQCSMAVNGKLTID 380
Query: 190 TLSSKIVVAVPVNWENDNLSVLLKHLHNLN 279
++I + P W + + L+K + +N
Sbjct: 381 YQGTEICLERP--WRRETMHNLVKEITGIN 408
>UniRef50_Q236S5 Cluster: TRNAHis guanylyltransferase family
protein; n=1; Tetrahymena thermophila SB210|Rep: TRNAHis
guanylyltransferase family protein - Tetrahymena
thermophila SB210
Length = 334
Score = 33.9 bits (74), Expect = 0.69
Identities = 25/70 (35%), Positives = 33/70 (47%)
Frame = -1
Query: 240 IVFPIDGHGHNDFTAERKNFENGRDKLFAIVNNVAAERRLVDQIHICLIHNHCIEQYVVF 61
IV IDG G FTA NFE DK + N AAE + I L + E VF
Sbjct: 24 IVVRIDGKGFTKFTANH-NFEKPNDKRGLDLMNKAAESVMETFNEIMLAYGQSDEFSFVF 82
Query: 60 VKNALVFKHQ 31
K+A +++ +
Sbjct: 83 KKDAELYQRR 92
>UniRef50_A2DBR6 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 854
Score = 33.9 bits (74), Expect = 0.69
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +1
Query: 31 LVLKNEGVFNKHHVLFDAMIMYKTYVNLVDESAFGSNVINYCEQF-ITAIFEIFTLSSKI 207
++LKN FN+ L A Y TY+N++ + F S +INY + + + I
Sbjct: 450 ILLKNN-YFNEAMQLSHAFRRYATYLNILIKRKFWSEIINYFHEVDKDTLVNSLREVADI 508
Query: 208 VVAVPVNWENDNLSVLLKH 264
+ +P ++ + + ++L+H
Sbjct: 509 LDILPASYRGELIDIILQH 527
>UniRef50_A7JUK1 Cluster: Possible methyltransferase; n=3;
Pasteurellaceae|Rep: Possible methyltransferase -
Mannheimia haemolytica PHL213
Length = 235
Score = 33.5 bits (73), Expect = 0.92
Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = -1
Query: 228 IDGHGHNDFTAERKNF--ENGRDKLFAIVNNVAAERRLVDQIHICLIHNHCIEQYVVFVK 55
I + H ++ A+ K + ENG+ ++ +AA +LVDQ I +C+EQ+++F K
Sbjct: 133 ISHYSHLNWLAKAKPWLAENGK---ITLILPIAAAEKLVDQSE--QIGLYCVEQWLIFTK 187
Query: 54 NALVFKHQVFVYFFHK 7
+ + K + + +K
Sbjct: 188 SGKLAKRSIVSFSLNK 203
>UniRef50_Q1RJ83 Cluster: Putative uncharacterized protein; n=2;
Rickettsia bellii|Rep: Putative uncharacterized protein
- Rickettsia bellii (strain RML369-C)
Length = 430
Score = 31.9 bits (69), Expect = 2.8
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +1
Query: 157 EQFITAIFEIFTLSSKIVVAVPVNWENDNLSVLLKH 264
+ FIT + +S+K ++++ NW DN+ ++ +H
Sbjct: 104 KSFITLLEHSKKISAKNIISIAENWSKDNIKIIFEH 139
>UniRef50_Q6LFK8 Cluster: DNA repair protein RAD50, putative; n=1;
Plasmodium falciparum 3D7|Rep: DNA repair protein RAD50,
putative - Plasmodium falciparum (isolate 3D7)
Length = 2236
Score = 31.9 bits (69), Expect = 2.8
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -1
Query: 180 ENGRDKLFAIVNNVAAERRLVDQIHICLIHNHCIEQYVVFVKN 52
E G K + NV ER + + ++C+ +N C+E+ + KN
Sbjct: 793 ERGMQKKINVERNVCVERNVCVERNVCVENNICVEKNICVEKN 835
>UniRef50_A5IZF5 Cluster: Putative uncharacterized protein; n=1;
Mycoplasma agalactiae|Rep: Putative uncharacterized
protein - Mycoplasma agalactiae
Length = 805
Score = 31.5 bits (68), Expect = 3.7
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Frame = +1
Query: 61 KHHVLFDAM-IMYKTYVNLVDESAFGSNVIN---YCEQFITAIFEIFTLSSKIV--VAVP 222
K H +AM I K Y NL+D + + N+ N YC + A+ F KIV +
Sbjct: 711 KVHNGSEAMEIAIKRYANLIDGNVWEENLSNLKKYCHNDVLAMIMAFNFIEKIVSDIFPE 770
Query: 223 VNWENDNLSVLLKHLHNLNLIGIEIVN*NKSCGKK 327
+N + ++L N + IE++N + KK
Sbjct: 771 INELKYTFNNSYQYLLNRHKWQIEVINYKERATKK 805
>UniRef50_A6GWR8 Cluster: Phosphomethylpyrimidine kinase; n=1;
Flavobacterium psychrophilum JIP02/86|Rep:
Phosphomethylpyrimidine kinase - Flavobacterium
psychrophilum (strain JIP02/86 / ATCC 49511)
Length = 252
Score = 31.1 bits (67), Expect = 4.9
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Frame = +1
Query: 28 HLVLKNEGVFNKHHVLFDAMIMYKTYVNL--VDESAFGSNVINYCEQFITAIFEIFTLSS 201
H+V K + + K V++D ++ T N ++ F ++ + E+ LS+
Sbjct: 91 HIVFKIKKLSPKTKVVWDTVLKSSTEFNFLNIENQDFLIKILKEIDLITPNYQEVLKLSA 150
Query: 202 KIVVAVPVNWE-NDNLSVLLKHLHNLNLIGIE 294
+ A + + ++ +VLLK HNLN IG +
Sbjct: 151 NSIDANSIATKLSEYCAVLLKGGHNLNKIGFD 182
>UniRef50_Q4J719 Cluster: Carbon monoxide dehydrogenase large chain;
n=2; Sulfolobus|Rep: Carbon monoxide dehydrogenase large
chain - Sulfolobus acidocaldarius
Length = 725
Score = 31.1 bits (67), Expect = 4.9
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +1
Query: 127 AFGSNVINYCEQFITAIFEIFTLSSKIVVAVPVNWENDNLSVLLKHLHNLNL 282
AFGS +INY E+F+ A + T P+ W N ++ H ++
Sbjct: 222 AFGSKIINYAEEFVVAYLSVVTKR-------PIKWFNSRTEDMMTTNHGRDM 266
>UniRef50_UPI00006CAE6C Cluster: hypothetical protein TTHERM_00765150;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00765150 - Tetrahymena thermophila SB210
Length = 2339
Score = 30.7 bits (66), Expect = 6.5
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +1
Query: 124 SAFGSNVINYCEQFITAIFEIFTLSSKIVVAVPVNWENDN-LSVLLKHLHNLNLIG--IE 294
S S++ NY FI + + S + A+P+N N N +SVL+ + NLIG +
Sbjct: 1311 SISSSSLKNYINTFIAFQLQFQNIYSTLNQAIPINAINLNTVSVLITNSSFTNLIGGAVA 1370
Query: 295 IVN*NKSC 318
I N K C
Sbjct: 1371 IQNPQKFC 1378
>UniRef50_A6CC48 Cluster: Putative uncharacterized protein; n=1;
Planctomyces maris DSM 8797|Rep: Putative
uncharacterized protein - Planctomyces maris DSM 8797
Length = 419
Score = 30.7 bits (66), Expect = 6.5
Identities = 15/73 (20%), Positives = 31/73 (42%)
Frame = -2
Query: 227 LTGTATTILLLSVKISKMAVINCSQ*LITLLPNADSSTKFTYVLYIIIASNNTWCLLKTP 48
+TG ++L + + + L+T +PN S F + I + T L P
Sbjct: 282 ITGLGAWLVLSLIGVPMAGTLGLISGLLTFIPNIGSLIAFCLAILIALPKGPTTAALVVP 341
Query: 47 SFLSTKCLYTFFI 9
+F+ + + ++ I
Sbjct: 342 AFIGLQLVESYLI 354
>UniRef50_A4TTZ1 Cluster: Cell division protein FtsQ; n=3;
Magnetospirillum|Rep: Cell division protein FtsQ -
Magnetospirillum gryphiswaldense
Length = 329
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = -1
Query: 186 NFENGRDKLFAI--VNNVAAERRLVDQIHICLIHNHCI 79
N E +D+L A+ V A ERRL D +HI +I I
Sbjct: 150 NLEQAKDRLEALPSVRQAAVERRLPDTLHIAIIERQPI 187
>UniRef50_Q8WP99 Cluster: Normocyte-binding protein 1; n=11;
Plasmodium|Rep: Normocyte-binding protein 1 - Plasmodium
falciparum
Length = 2977
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = -1
Query: 222 GHGHNDFTAERKNFENGRDKLFAIVNNVAAERRLVDQIHICLIHNHCIEQYVVFVKN 52
G + DF RKN N R+ + V+ + E + +I C+ + I+QYV KN
Sbjct: 869 GQYYKDFITSRKNIYNIRENISKNVDMIKNEEK--KKIQNCVDKYNSIKQYVKMFKN 923
>UniRef50_P32048 Cluster: Lysyl-tRNA synthetase, mitochondrial
precursor; n=3; Saccharomycetaceae|Rep: Lysyl-tRNA
synthetase, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 576
Score = 30.7 bits (66), Expect = 6.5
Identities = 13/38 (34%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +1
Query: 10 MKKVYK-HLVLKNEGVFNKHHVLFDAMIMYKTYVNLVD 120
++KVY+ V +NEG+ + H+ F + Y+TY+++ D
Sbjct: 294 LQKVYEIGKVFRNEGIDSTHNAEFSTLEFYETYMSMDD 331
>UniRef50_Q3ZXP7 Cluster: Hydrogenase subunit HymB; n=7;
Bacteria|Rep: Hydrogenase subunit HymB - Dehalococcoides
sp. (strain CBDB1)
Length = 640
Score = 30.3 bits (65), Expect = 8.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 131 SAATLLTIANSLSRPFSKFLRSAVKSLWPCPS 226
S+A + I + P K++R+A+K LW PS
Sbjct: 307 SSALMTAIEGRVGEPRPKYIRTAIKGLWDKPS 338
>UniRef50_Q18ZB9 Cluster: Flagellar biosynthetic protein FliR; n=2;
Desulfitobacterium hafniense|Rep: Flagellar biosynthetic
protein FliR - Desulfitobacterium hafniense (strain
DCB-2)
Length = 260
Score = 30.3 bits (65), Expect = 8.5
Identities = 21/54 (38%), Positives = 29/54 (53%)
Frame = +1
Query: 58 NKHHVLFDAMIMYKTYVNLVDESAFGSNVINYCEQFITAIFEIFTLSSKIVVAV 219
N HH L AM+ TYV ++ A +NY +I I EIFTLS ++ + V
Sbjct: 141 NSHHYLIAAMVKSYTYVP-INPGALPQG-LNY---YIFLIREIFTLSVQLALPV 189
>UniRef50_A6QC01 Cluster: Anthranilate/para-aminobenzoate synthase
component I; n=2; Epsilonproteobacteria|Rep:
Anthranilate/para-aminobenzoate synthase component I -
Sulfurovum sp. (strain NBC37-1)
Length = 322
Score = 30.3 bits (65), Expect = 8.5
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +1
Query: 25 KHLVLKNEGVFNKHHVLFDAMIMYKTYVNLVDESAFGSNV----INYCEQFITAIFEIFT 192
+H +L +E +H ++ D M D G+NV Y ++ E+F
Sbjct: 161 EHRILNDEKEMAEHIMIVDLMRN--------DLGIIGTNVKVEKFRYVDKIKAGEKELFQ 212
Query: 193 LSSKIVVAVPVNWENDNLSVLL 258
+SSKI +P W+N NL LL
Sbjct: 213 VSSKITATLPEGWKN-NLGTLL 233
>UniRef50_Q8IJU7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1345
Score = 30.3 bits (65), Expect = 8.5
Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 31 LVLKNEGVFNKHHVLFDAMI-MYKTYVNLVDESAFGSNVINYCEQFITAIFEIFTLSSKI 207
++LKN + H + +D + +Y T +NL+ + +I C I +++I +I
Sbjct: 345 VMLKNYDISYTHQIYYDILFKIYSTIINLIINNDLTIYIIKECVSIILQMYDISKKQHQI 404
Query: 208 V 210
+
Sbjct: 405 I 405
>UniRef50_Q7RCW9 Cluster: Lysyl-tRNA synthetase; n=5; Plasmodium
(Vinckeia)|Rep: Lysyl-tRNA synthetase - Plasmodium
yoelii yoelii
Length = 644
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/82 (20%), Positives = 39/82 (47%)
Frame = +1
Query: 40 KNEGVFNKHHVLFDAMIMYKTYVNLVDESAFGSNVINYCEQFITAIFEIFTLSSKIVVAV 219
+NEG+ H+ F + +YK+Y N ++ + ++ I + + F++SS +
Sbjct: 366 RNEGLSTIHNPEFTMLEIYKSYANY-------KYMMKFTKKLIKNVAKKFSISSPYSSIL 418
Query: 220 PVNWENDNLSVLLKHLHNLNLI 285
WE + ++K ++N +
Sbjct: 419 QNKWEKKSFIKIIKEYTSINFL 440
>UniRef50_Q12YG4 Cluster: Putative uncharacterized protein; n=1;
Methanococcoides burtonii DSM 6242|Rep: Putative
uncharacterized protein - Methanococcoides burtonii
(strain DSM 6242)
Length = 128
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 252 YT*IIVFPIDGHGHNDFTAERKNFENGRDKLFA 154
Y+ +VF I+ HG+++ T E K F + D +FA
Sbjct: 26 YSDSLVFAIENHGNDNHTIEVKIFNDDSDMIFA 58
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 326,152,930
Number of Sequences: 1657284
Number of extensions: 5839879
Number of successful extensions: 15668
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 15280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15655
length of database: 575,637,011
effective HSP length: 86
effective length of database: 433,110,587
effective search space used: 9961543501
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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