Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1b04
         (330 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011146-1|AAR82814.1|  942|Drosophila melanogaster GH17715p pro...    27   5.7  
AF196306-1|AAF07207.2| 1440|Drosophila melanogaster cell death p...    27   5.7  
AF162659-1|AAD45988.1| 1440|Drosophila melanogaster Apaf-1 relat...    27   5.7  
AE013599-2400|AAF57916.1| 1440|Drosophila melanogaster CG6829-PB...    27   5.7  
AB027531-1|BAA86939.1| 1440|Drosophila melanogaster Apaf-1/CED-4...    27   5.7  

>BT011146-1|AAR82814.1|  942|Drosophila melanogaster GH17715p
           protein.
          Length = 942

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -1

Query: 210 NDFTAERKNFENGRDKLFAIVNNVAAERRLVDQIH-ICLIHNHCIEQ 73
           +D T     FENG  +LFA+      E R V  I+ I  +H HCI Q
Sbjct: 700 DDGTMLAMGFENGTLELFAV------ENRKVQLIYSIEEVHEHCIRQ 740


>AF196306-1|AAF07207.2| 1440|Drosophila melanogaster cell death
            protein HAC-1 protein.
          Length = 1440

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -1

Query: 210  NDFTAERKNFENGRDKLFAIVNNVAAERRLVDQIH-ICLIHNHCIEQ 73
            +D T     FENG  +LFA+      E R V  I+ I  +H HCI Q
Sbjct: 1198 DDGTMLAMGFENGTLELFAV------ENRKVQLIYSIEEVHEHCIRQ 1238


>AF162659-1|AAD45988.1| 1440|Drosophila melanogaster Apaf-1 related
            killer DARK protein.
          Length = 1440

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -1

Query: 210  NDFTAERKNFENGRDKLFAIVNNVAAERRLVDQIH-ICLIHNHCIEQ 73
            +D T     FENG  +LFA+      E R V  I+ I  +H HCI Q
Sbjct: 1198 DDGTMLAMGFENGTLELFAV------ENRKVQLIYSIEEVHEHCIRQ 1238


>AE013599-2400|AAF57916.1| 1440|Drosophila melanogaster CG6829-PB,
            isoform B protein.
          Length = 1440

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -1

Query: 210  NDFTAERKNFENGRDKLFAIVNNVAAERRLVDQIH-ICLIHNHCIEQ 73
            +D T     FENG  +LFA+      E R V  I+ I  +H HCI Q
Sbjct: 1198 DDGTMLAMGFENGTLELFAV------ENRKVQLIYSIEEVHEHCIRQ 1238


>AB027531-1|BAA86939.1| 1440|Drosophila melanogaster
            Apaf-1/CED-4-related caspase activatorDapaf-1L protein.
          Length = 1440

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -1

Query: 210  NDFTAERKNFENGRDKLFAIVNNVAAERRLVDQIH-ICLIHNHCIEQ 73
            +D T     FENG  +LFA+      E R V  I+ I  +H HCI Q
Sbjct: 1198 DDGTMLAMGFENGTLELFAV------ENRKVQLIYSIEEVHEHCIRQ 1238


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,806,416
Number of Sequences: 53049
Number of extensions: 272394
Number of successful extensions: 670
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 670
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 714329562
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)