Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1a18
         (603 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99281-11|CAB16517.1|  154|Caenorhabditis elegans Hypothetical p...   222   2e-58
Z81457-5|CAB03817.2|  584|Caenorhabditis elegans Hypothetical pr...    31   0.84 
Z77666-5|CAB01230.1|  729|Caenorhabditis elegans Hypothetical pr...    30   1.5  
U50069-7|AAB37561.1|  913|Caenorhabditis elegans Hypothetical pr...    28   5.9  

>Z99281-11|CAB16517.1|  154|Caenorhabditis elegans Hypothetical
           protein Y57G11C.16 protein.
          Length = 154

 Score =  222 bits (542), Expect = 2e-58
 Identities = 98/135 (72%), Positives = 119/135 (88%)
 Frame = +2

Query: 110 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 289
           MSL+IP+KFQHI R+MNTNIDG RKV +A+TAIKGVGRR++ +  +KAD+D++KRAGE T
Sbjct: 1   MSLIIPEKFQHIHRVMNTNIDGNRKVPYALTAIKGVGRRFAFVCCRKADVDVNKRAGELT 60

Query: 290 EEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 469
           EE+ +KI+TIM NP QYKIP+WFLNRQKDI DGK  QL S+ +D+KLREDLER+KKIR H
Sbjct: 61  EEDFDKIVTIMQNPSQYKIPNWFLNRQKDIKDGKTGQLLSTAVDNKLREDLERMKKIRLH 120

Query: 470 RGMRHYWGLRVRGQH 514
           RG+RHYWGLRVRGQH
Sbjct: 121 RGLRHYWGLRVRGQH 135


>Z81457-5|CAB03817.2|  584|Caenorhabditis elegans Hypothetical
           protein C01G12.7 protein.
          Length = 584

 Score = 30.7 bits (66), Expect = 0.84
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +3

Query: 432 VKIWRGSRRFALTEGCDITGAFVCVVSTLRLLAGEEELLVYQRRS 566
           +K +R   + AL     +TGA + + +TL LLA    LL  QR S
Sbjct: 137 IKKYRWGMKMALLFHLCVTGALLSITNTLHLLASGYHLLKRQRNS 181


>Z77666-5|CAB01230.1|  729|Caenorhabditis elegans Hypothetical
           protein K08E7.7 protein.
          Length = 729

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 25/116 (21%), Positives = 49/116 (42%), Gaps = 5/116 (4%)
 Frame = +2

Query: 14  YVIIDTIDQLCSVFLFVS----PVLCLGTLVRNLTKMSLVIPDKFQHILRIMNTNIDGKR 181
           YV I T  QLC+++LF       +  +   +    K +  I      ++  +     G  
Sbjct: 552 YVFIVTASQLCTLYLFNEQDSFTIEQISKAIEMTAKSTSAIVGSLNPVIDPVLVVDKGNE 611

Query: 182 KVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT-EEEVEKIITIMSNPRQYKI 346
           K  +   A+  +  +Y+N   KK  +DL     + T + E + +   + + R+Y+I
Sbjct: 612 KDGYPPDAVVSLNTKYAN---KKVRVDLTTAIKKATADRETDAVQNTVESDRKYEI 664


>U50069-7|AAB37561.1|  913|Caenorhabditis elegans Hypothetical
           protein C09B9.7 protein.
          Length = 913

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = +2

Query: 314 TIMSNPRQYKIPDWFLNRQK-DIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYW 490
           +I  NP    + +  LNR      D KY    SS+++  ++ DLE+LKKI   + ++ Y 
Sbjct: 111 SIRDNPVSQSLANILLNRDTAPYYDYKY---LSSDIELMVK-DLEKLKKINKEKTLKMY- 165

Query: 491 GLRVRG 508
           GL   G
Sbjct: 166 GLLAHG 171


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,440,926
Number of Sequences: 27780
Number of extensions: 288145
Number of successful extensions: 911
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)