Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1a15
(756 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0725 - 5422477-5422641,5422721-5422792,5422876-5422958,542... 85 6e-17
07_03_1269 - 25339970-25340086,25340357-25340416,25341494-253415... 58 1e-08
04_04_0021 - 22192869-22192936,22193232-22193298,22193484-221935... 58 1e-08
06_01_0673 - 4908496-4908563,4908646-4908712,4908821-4908922,490... 57 2e-08
09_04_0180 + 15367737-15367755,15368874-15369739 32 0.43
05_06_0020 + 24976990-24977167,24978763-24978874,24979634-249797... 32 0.43
03_01_0161 + 1307206-1307769,1307979-1308101,1308182-1308286,130... 29 3.0
07_01_0318 + 2239382-2239452,2239573-2240218,2240321-2240386,224... 29 4.0
01_01_0103 - 773727-774737,774797-774813,774852-775078,777465-77... 29 4.0
10_08_0424 - 17803984-17805270 29 5.3
07_03_1610 - 28131623-28131710,28132017-28132321,28132921-281331... 29 5.3
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 29 5.3
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 28 7.0
01_01_0118 - 871481-872606,872795-872950,873051-873817 28 9.2
>02_01_0725 -
5422477-5422641,5422721-5422792,5422876-5422958,
5423113-5423173,5423305-5423381,5423456-5423522,
5423770-5423803,5423894-5423974,5424285-5424436,
5424529-5424615,5425019-5425126,5425906-5426259
Length = 446
Score = 85.0 bits (201), Expect = 6e-17
Identities = 37/60 (61%), Positives = 45/60 (75%)
Frame = +3
Query: 576 GYGLSGDASHITTPREDGSGAMLSMARALKDGNLQKEDITYINAHATSTPIGDGIESTAI 755
GYG+SGDA HIT P+ DG GA L+M RAL LQ + I Y+NAHATSTP+GD +E+ AI
Sbjct: 290 GYGMSGDAHHITQPQNDGRGATLAMKRALDQSGLQADQIDYLNAHATSTPLGDAVEANAI 349
Score = 37.5 bits (83), Expect = 0.011
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +3
Query: 390 LAGLIPREKDGIV--EKALSKSTLKSMAPATSLALVATSEALKDANWTPKSEHCKEMT 557
+A +PR K E+A +K KS++ + AL A EAL+DANW P + KE T
Sbjct: 98 VAAPVPRGKGDAEFDEEAWTKDN-KSISGFIAYALCAADEALRDANWLPSEDEKKERT 154
>07_03_1269 -
25339970-25340086,25340357-25340416,25341494-25341574,
25341647-25341801,25341894-25341978,25342106-25342174,
25342410-25342489,25342620-25342665,25342743-25342838,
25342921-25343031,25343141-25343344,25343430-25343632,
25344495-25344711
Length = 507
Score = 57.6 bits (133), Expect = 1e-08
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +3
Query: 537 EHCKEMTG--VAIGMGYGLSGDASHITTPREDGSGAMLSMARALKDGNLQKEDITYINAH 710
EH K+ A +G + DA H+T P +G G +L + +AL D + +E+I Y+NAH
Sbjct: 339 EHAKQRGAKIYAEFLGGSFTCDAYHMTEPHPEGRGIILCIEKALADSGVAREEINYVNAH 398
Query: 711 ATSTPIGDGIESTAI 755
ATST GD E AI
Sbjct: 399 ATSTQSGDLKEYEAI 413
>04_04_0021 -
22192869-22192936,22193232-22193298,22193484-22193585,
22193694-22193807,22194156-22194329,22194835-22195266,
22196328-22196759
Length = 462
Score = 57.6 bits (133), Expect = 1e-08
Identities = 28/65 (43%), Positives = 40/65 (61%)
Frame = +3
Query: 561 VAIGMGYGLSGDASHITTPREDGSGAMLSMARALKDGNLQKEDITYINAHATSTPIGDGI 740
+A +G ++ DA H+T PR DG G + ++L+D + E++ YINAHATST GD
Sbjct: 304 IAEYLGGAVNCDAYHMTDPRSDGLGVSSCITQSLEDAGVAPEEVNYINAHATSTLAGDLA 363
Query: 741 ESTAI 755
E AI
Sbjct: 364 EVRAI 368
>06_01_0673 -
4908496-4908563,4908646-4908712,4908821-4908922,
4909006-4909119,4909510-4909683,4909769-4910200,
4910855-4911295
Length = 465
Score = 56.8 bits (131), Expect = 2e-08
Identities = 28/65 (43%), Positives = 39/65 (60%)
Frame = +3
Query: 561 VAIGMGYGLSGDASHITTPREDGSGAMLSMARALKDGNLQKEDITYINAHATSTPIGDGI 740
+A +G ++ DA H+T PR DG G + ++L D + E++ YINAHATST GD
Sbjct: 307 IAEYLGGAVNCDAYHMTDPRSDGLGVSSCIKQSLADAGVAPEEVNYINAHATSTLAGDLA 366
Query: 741 ESTAI 755
E AI
Sbjct: 367 EVNAI 371
>09_04_0180 + 15367737-15367755,15368874-15369739
Length = 294
Score = 32.3 bits (70), Expect = 0.43
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = -3
Query: 601 EASPERPYPMPIATPVIS-----LQCSLLGVQLASLSASDVATNANDVAGAIDF 455
E PE P P PI TP+ S + S L +L+ ASD AT A A+DF
Sbjct: 174 EPEPEPPTPKPIPTPIPSPPPRLIPRSFLAKRLSPTGASDAAT-ATKTTKAMDF 226
>05_06_0020 + 24976990-24977167,24978763-24978874,24979634-24979722,
24979801-24979869,24979953-24980082,24980506-24980664,
24980767-24981127,24981343-24981452,24981753-24981909,
24983336-24983748,24983828-24984020,24984384-24986198
Length = 1261
Score = 32.3 bits (70), Expect = 0.43
Identities = 27/92 (29%), Positives = 40/92 (43%)
Frame = -3
Query: 673 LPSFKALAIDNIAPLPSSLGVVM*EASPERPYPMPIATPVISLQCSLLGVQLASLSASDV 494
LPS ++L ID P+P L V AS P T Q +++AS S S+V
Sbjct: 839 LPSVRSLQIDKPVPVPPRLPQVDKAASLSSELPQTSTTSNSEAQEETAAIRVASPSVSEV 898
Query: 493 ATNANDVAGAIDFRVDFDNAFSTIPSFSLGIS 398
A+ + A F ST+P+ + +S
Sbjct: 899 TVTASRPSSA----PVFPAPRSTVPATQVQVS 926
>03_01_0161 +
1307206-1307769,1307979-1308101,1308182-1308286,
1308688-1308867,1308988-1309050,1309151-1309345,
1309704-1309805,1309885-1309947,1310045-1310113,
1310215-1310270,1310587-1310755
Length = 562
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -3
Query: 655 LAIDNIAPLPSSLGVVM*EASPERPYPMPIATPVISLQCSLLGVQLASLSASD-VATNAN 479
LA+ ++AP PS ASP P P +TP S C+LL L + D VA++A+
Sbjct: 63 LALFDLAPSPSHHDAAAAAASPGAPPPSG-STPASSPYCALLRAALFGPTTPDRVASSAS 121
>07_01_0318 +
2239382-2239452,2239573-2240218,2240321-2240386,
2240507-2240572,2240681-2241069,2242296-2242401
Length = 447
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 692 YIFFLQIAIFQGSRHRQHSSTSIFSW 615
++F LQ F G+RHRQ+ + W
Sbjct: 400 FLFILQYQFFSGARHRQYVKNIVAVW 425
>01_01_0103 -
773727-774737,774797-774813,774852-775078,777465-778237
Length = 675
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +3
Query: 384 FGLAGLIPREKDGIVEKALSKSTLKSMAP 470
FGLA L PREK + ++AL + T+ MAP
Sbjct: 491 FGLAKLYPREKSFVSDRAL-RGTVGYMAP 518
>10_08_0424 - 17803984-17805270
Length = 428
Score = 28.7 bits (61), Expect = 5.3
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -3
Query: 634 PLPSSLGVVM*EASPERPYPMPIA-TPVI--SLQCSLLGVQLASLSASDVATNANDVAGA 464
PLP++ + A P+ +P P A TP S + +L +QLA +D A + VA A
Sbjct: 13 PLPAAHLLRRFSALPDVDHPPPPASTPTTPASTRSPILDLQLAVRGEADPARIHSLVATA 72
Query: 463 IDFRVDFDNAFSTIPSFSLGIS 398
+ D+ + P FSL S
Sbjct: 73 LSRPDDYPRLHGSRPLFSLAAS 94
>07_03_1610 -
28131623-28131710,28132017-28132321,28132921-28133118,
28134016-28134183
Length = 252
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -3
Query: 754 IAVDSIPSPIGVDVAWAFIYVISSFCKLPSFKALAIDNIAPLPSSLGVVM*EASPER 584
IA + P+ + + + IS C+ S+ IDN PS+L ++ +A P++
Sbjct: 143 IAREEAPASSSAEPCLSSLVEISEICRSMSYSGSGIDNGGHDPSTLAIMPTQALPKK 199
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +3
Query: 558 GVAIGMGYGLSGDASHITTPREDGSGAMLSMARALKDGNLQKEDITYINAHATSTP 725
GV G+G G + ++ + PR S A+ +LK G +Q ++++A +++TP
Sbjct: 633 GVDFGLGIGYNAESGSVPAPR---SAAL----NSLKTGMMQNFKSSFVSASSSNTP 681
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = -3
Query: 508 SASDVATNANDVAGAIDFRVDFDNAFSTIPSFSLGISPANPKEI 377
S ++ + ND+A A + R DF++ S S +G+S +E+
Sbjct: 2757 STVEIGASTNDIAPACELRKDFESHVSGCVSKPVGLSELRLEEL 2800
>01_01_0118 - 871481-872606,872795-872950,873051-873817
Length = 682
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 384 FGLAGLIPREKDGIVEKALSKSTLKSMAP 470
FGLA L PR+K + ++AL + T+ MAP
Sbjct: 502 FGLAKLYPRDKSFVSDRAL-RGTVGYMAP 529
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,432,789
Number of Sequences: 37544
Number of extensions: 311114
Number of successful extensions: 879
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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