Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1a15
         (756 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC008202-1|AAH08202.1|  459|Homo sapiens 3-oxoacyl-ACP synthase,...    87   5e-17
AK000611-1|BAA91286.1|  459|Homo sapiens protein ( Homo sapiens ...    87   5e-17

>BC008202-1|AAH08202.1|  459|Homo sapiens 3-oxoacyl-ACP synthase,
           mitochondrial protein.
          Length = 459

 Score = 87.4 bits (207), Expect = 5e-17
 Identities = 39/61 (63%), Positives = 47/61 (77%)
 Frame = +3

Query: 573 MGYGLSGDASHITTPREDGSGAMLSMARALKDGNLQKEDITYINAHATSTPIGDGIESTA 752
           +GYGLSGDA HIT P  +G GA+  MA ALKD  +Q E+I+YINAHATSTP+GD  E+ A
Sbjct: 303 LGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEISYINAHATSTPLGDAAENKA 362

Query: 753 I 755
           I
Sbjct: 363 I 363



 Score = 50.8 bits (116), Expect = 5e-06
 Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
 Frame = +3

Query: 378 ISFGLAGLIPREKDG---IVEKALSKSTLKSMAPATSLALVATSEALKDANWTPKSEHCK 548
           I   +A  +PR  D      +  +SKS +KSM+  T +A+ A   A+KD+ W P+SE  +
Sbjct: 84  IPCSVAAYVPRGSDEGQFNEQNFVSKSDIKSMSSPTIMAIGAAELAMKDSGWHPQSEADQ 143

Query: 549 EMTGVAIGMG 578
             TGVAIGMG
Sbjct: 144 VATGVAIGMG 153


>AK000611-1|BAA91286.1|  459|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20604 fis, clone KAT06449. ).
          Length = 459

 Score = 87.4 bits (207), Expect = 5e-17
 Identities = 39/61 (63%), Positives = 47/61 (77%)
 Frame = +3

Query: 573 MGYGLSGDASHITTPREDGSGAMLSMARALKDGNLQKEDITYINAHATSTPIGDGIESTA 752
           +GYGLSGDA HIT P  +G GA+  MA ALKD  +Q E+I+YINAHATSTP+GD  E+ A
Sbjct: 303 LGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEISYINAHATSTPLGDAAENKA 362

Query: 753 I 755
           I
Sbjct: 363 I 363



 Score = 50.8 bits (116), Expect = 5e-06
 Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
 Frame = +3

Query: 378 ISFGLAGLIPREKDG---IVEKALSKSTLKSMAPATSLALVATSEALKDANWTPKSEHCK 548
           I   +A  +PR  D      +  +SKS +KSM+  T +A+ A   A+KD+ W P+SE  +
Sbjct: 84  IPCSVAAYVPRGSDEGQFNEQNFVSKSDIKSMSSPTIMAIGAAELAMKDSGWHPQSEADQ 143

Query: 549 EMTGVAIGMG 578
             TGVAIGMG
Sbjct: 144 VATGVAIGMG 153


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,940,749
Number of Sequences: 237096
Number of extensions: 1787181
Number of successful extensions: 7809
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7809
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)