Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1a15
         (756 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001769-1|AAN71524.1|  447|Drosophila melanogaster RH10820p pro...    92   9e-19
AY060749-1|AAL28297.1|  274|Drosophila melanogaster GH20093p pro...    92   9e-19
AE014297-314|AAF51982.1|  438|Drosophila melanogaster CG12170-PA...    92   9e-19
AE014134-551|AAF51149.1| 2409|Drosophila melanogaster CG3524-PA ...    30   3.0  

>BT001769-1|AAN71524.1|  447|Drosophila melanogaster RH10820p
           protein.
          Length = 447

 Score = 91.9 bits (218), Expect = 9e-19
 Identities = 40/61 (65%), Positives = 50/61 (81%)
 Frame = +3

Query: 573 MGYGLSGDASHITTPREDGSGAMLSMARALKDGNLQKEDITYINAHATSTPIGDGIESTA 752
           +GYGLSGDA HIT+P +DG+GA L+M RA++D  +  ED+TY+NAHATSTP GD IES A
Sbjct: 292 LGYGLSGDAYHITSPSDDGAGATLAMKRAIQDAGIAPEDVTYVNAHATSTPTGDRIESHA 351

Query: 753 I 755
           I
Sbjct: 352 I 352



 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
 Frame = +3

Query: 390 LAGLIPREKDGIVEKALSKSTLKSMAPATSLALVATSEALKDANWTPK--SEHCKEMTGV 563
           +A  IPRE   + ++ L+KS +K M+PAT LA++A  EAL      PK  SE   E  GV
Sbjct: 78  VAAQIPRENLQL-DQHLTKSDIKLMSPATQLAVLAAEEALSTGKLCPKQLSEEELERFGV 136

Query: 564 AIGMG 578
            +GMG
Sbjct: 137 CVGMG 141


>AY060749-1|AAL28297.1|  274|Drosophila melanogaster GH20093p
           protein.
          Length = 274

 Score = 91.9 bits (218), Expect = 9e-19
 Identities = 40/61 (65%), Positives = 50/61 (81%)
 Frame = +3

Query: 573 MGYGLSGDASHITTPREDGSGAMLSMARALKDGNLQKEDITYINAHATSTPIGDGIESTA 752
           +GYGLSGDA HIT+P +DG+GA L+M RA++D  +  ED+TY+NAHATSTP GD IES A
Sbjct: 119 LGYGLSGDAYHITSPSDDGAGATLAMKRAIQDAGIAPEDVTYVNAHATSTPTGDRIESHA 178

Query: 753 I 755
           I
Sbjct: 179 I 179


>AE014297-314|AAF51982.1|  438|Drosophila melanogaster CG12170-PA
           protein.
          Length = 438

 Score = 91.9 bits (218), Expect = 9e-19
 Identities = 40/61 (65%), Positives = 50/61 (81%)
 Frame = +3

Query: 573 MGYGLSGDASHITTPREDGSGAMLSMARALKDGNLQKEDITYINAHATSTPIGDGIESTA 752
           +GYGLSGDA HIT+P +DG+GA L+M RA++D  +  ED+TY+NAHATSTP GD IES A
Sbjct: 283 LGYGLSGDAYHITSPSDDGAGATLAMKRAIQDAGIAPEDVTYVNAHATSTPTGDRIESHA 342

Query: 753 I 755
           I
Sbjct: 343 I 343



 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
 Frame = +3

Query: 390 LAGLIPREKDGIVEKALSKSTLKSMAPATSLALVATSEALKDANWTPK--SEHCKEMTGV 563
           +A  IPRE   + ++ L+KS +K M+PAT LA++A  EAL      PK  SE   E  GV
Sbjct: 69  VAAQIPRENLQL-DQHLTKSDIKLMSPATQLAVLAAEEALSTGKLCPKQLSEEELERFGV 127

Query: 564 AIGMG 578
            +GMG
Sbjct: 128 CVGMG 132


>AE014134-551|AAF51149.1| 2409|Drosophila melanogaster CG3524-PA
           protein.
          Length = 2409

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 11/44 (25%), Positives = 21/44 (47%)
 Frame = +3

Query: 624 DGSGAMLSMARALKDGNLQKEDITYINAHATSTPIGDGIESTAI 755
           DG      +     +  L  +++ Y+ AH + TP+GD  E+  +
Sbjct: 283 DGRMQQALLEETYSEIGLNPDEVVYVEAHGSGTPVGDDQEANML 326


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,117,531
Number of Sequences: 53049
Number of extensions: 537777
Number of successful extensions: 1776
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1776
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)