Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1a02
(239 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 23 0.46
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 22 1.1
AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory recept... 22 1.1
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 21 1.9
DQ855501-1|ABH88188.1| 146|Tribolium castaneum chemosensory pro... 19 5.7
AM292375-1|CAL23187.2| 311|Tribolium castaneum gustatory recept... 19 5.7
AM292354-1|CAL23166.1| 321|Tribolium castaneum gustatory recept... 19 5.7
AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory recept... 19 5.7
AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory recept... 19 7.5
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 19 9.9
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 19 9.9
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 19 9.9
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 19 9.9
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 19 9.9
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 19 9.9
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 19 9.9
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 19 9.9
AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical pro... 19 9.9
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 23.0 bits (47), Expect = 0.46
Identities = 10/44 (22%), Positives = 23/44 (52%)
Frame = -3
Query: 132 HFDFCTVP*YFISCYLVSIHLFHFLPKRL*SQINQIHLISFHYF 1
HF CT YF +++ + +++F + ++ + L+ +YF
Sbjct: 95 HFLLCTY--YFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYF 136
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 21.8 bits (44), Expect = 1.1
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 130 F*LLHCPMIFHIML 89
F L HC +FHI++
Sbjct: 666 FWLFHCHFLFHIVI 679
>AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory receptor
candidate 53 protein.
Length = 659
Score = 21.8 bits (44), Expect = 1.1
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 132 HFDFCTVP*YFISCYLVS 79
HF F V +++S YL+S
Sbjct: 244 HFIFIVVSIFYMSAYLIS 261
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 21.0 bits (42), Expect = 1.9
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -2
Query: 124 LLHCPMIFHIML 89
L HC +FHI++
Sbjct: 668 LFHCHFLFHIVI 679
>DQ855501-1|ABH88188.1| 146|Tribolium castaneum chemosensory
protein 15 protein.
Length = 146
Score = 19.4 bits (38), Expect = 5.7
Identities = 6/17 (35%), Positives = 12/17 (70%)
Frame = -2
Query: 124 LLHCPMIFHIMLSRFNP 74
++H P +H + ++FNP
Sbjct: 89 MIHRPNWWHELETKFNP 105
>AM292375-1|CAL23187.2| 311|Tribolium castaneum gustatory receptor
candidate 54 protein.
Length = 311
Score = 19.4 bits (38), Expect = 5.7
Identities = 6/11 (54%), Positives = 7/11 (63%)
Frame = +3
Query: 165 YWLLW*CHRCQ 197
YWL CH C+
Sbjct: 108 YWLHQICHICE 118
>AM292354-1|CAL23166.1| 321|Tribolium castaneum gustatory receptor
candidate 33 protein.
Length = 321
Score = 19.4 bits (38), Expect = 5.7
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = +3
Query: 168 WLLW*CHRCQNRLNKIRICTIK 233
++++ C R NKIR+ T +
Sbjct: 242 FVIYLCGRVMEEQNKIRLITFE 263
>AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory receptor
candidate 5 protein.
Length = 522
Score = 19.4 bits (38), Expect = 5.7
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -1
Query: 218 TDFIKSILAAMALPQKPIVILNTPGEISTILT 123
TDF K + + Q + L ISTILT
Sbjct: 53 TDFYKKLSPMRLIVQTCLDFLLLALNISTILT 84
>AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory receptor
candidate 1 protein.
Length = 373
Score = 19.0 bits (37), Expect = 7.5
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +1
Query: 151 VFSMTIGFCGSAIAARIDLIKSV 219
V S+ IGFC S + + S+
Sbjct: 75 VSSLLIGFCASIYVGTVWINTSI 97
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 18.6 bits (36), Expect = 9.9
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 133 VLISPGVFSMTIG 171
VL SPG FS+ G
Sbjct: 224 VLCSPGCFSLFRG 236
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 18.6 bits (36), Expect = 9.9
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 133 VLISPGVFSMTIG 171
VL SPG FS+ G
Sbjct: 538 VLCSPGCFSLFRG 550
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 18.6 bits (36), Expect = 9.9
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 133 VLISPGVFSMTIG 171
VL SPG FS+ G
Sbjct: 798 VLCSPGCFSLFRG 810
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 18.6 bits (36), Expect = 9.9
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 133 VLISPGVFSMTIG 171
VL SPG FS+ G
Sbjct: 798 VLCSPGCFSLFRG 810
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 18.6 bits (36), Expect = 9.9
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 133 VLISPGVFSMTIG 171
VL SPG FS+ G
Sbjct: 771 VLCSPGCFSLFRG 783
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 18.6 bits (36), Expect = 9.9
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 133 VLISPGVFSMTIG 171
VL SPG FS+ G
Sbjct: 771 VLCSPGCFSLFRG 783
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 18.6 bits (36), Expect = 9.9
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 133 VLISPGVFSMTIG 171
VL SPG FS+ G
Sbjct: 798 VLCSPGCFSLFRG 810
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 18.6 bits (36), Expect = 9.9
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 133 VLISPGVFSMTIG 171
VL SPG FS+ G
Sbjct: 798 VLCSPGCFSLFRG 810
>AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical
protein protein.
Length = 205
Score = 18.6 bits (36), Expect = 9.9
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 239 FFFYSTYTDFIKSIL 195
FFF++ DFI I+
Sbjct: 75 FFFFAICCDFIALIV 89
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,778
Number of Sequences: 336
Number of extensions: 1059
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 46
effective length of database: 107,129
effective search space used: 3535257
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
- SilkBase 1999-2023 -