Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1a02
         (239 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   1.1  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   1.5  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    22   3.4  
AJ010904-1|CAA09390.1|  142|Anopheles gambiae nitric oxide synth...    22   3.4  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    21   6.0  
AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    21   7.9  

>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -3

Query: 90  YLVSIHLFHFLPKRL*SQINQIHLISFHY 4
           YL      HF P    + IN  HL  FH+
Sbjct: 572 YLKQRKTIHFFPVLFLAAINPEHLSYFHF 600


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -1

Query: 173 KPIVILNTPGEISTILTFALSHDI 102
           +PI++LN PG++   L  +  +D+
Sbjct: 497 RPILLLNNPGKVYERLLLSRINDV 520


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 130 F*LLHCPMIFHIML 89
           F L HC  +FHI++
Sbjct: 708 FWLFHCHFLFHIVI 721


>AJ010904-1|CAA09390.1|  142|Anopheles gambiae nitric oxide synthase
           protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 202 RFWQRWHYHRSQ 167
           RFWQ W + +S+
Sbjct: 5   RFWQEWDHIKSE 16


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 10/47 (21%), Positives = 21/47 (44%)
 Frame = -1

Query: 164 VILNTPGEISTILTFALSHDISYHAISFQSICFIFFRKDYNLK*IKF 24
           V LN P  I  +  +  +   + +    Q+ C +FF  ++ +  I +
Sbjct: 383 VCLNLPSYIVRVKIYLETEHTNMNIYLVQNCCQLFFMTNFGINFILY 429


>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 66  HFLPKRL*SQINQIHL 19
           H LPK+L  ++  +HL
Sbjct: 384 HVLPKKLDDEVAALHL 399


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,285
Number of Sequences: 2352
Number of extensions: 3563
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 53
effective length of database: 439,323
effective search space used: 11422398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)