Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1a02
(239 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC127114-1|AAI27115.1| 1224|Homo sapiens ZMYM4 protein protein. 31 0.65
BC127113-1|AAI27114.1| 1516|Homo sapiens ZMYM4 protein protein. 31 0.65
BC012093-1|AAH12093.2| 1434|Homo sapiens ZMYM4 protein protein. 31 0.86
AL590434-3|CAI12468.1| 1548|Homo sapiens zinc finger, MYM-type 4... 31 0.86
AL356362-7|CAI22691.1| 1548|Homo sapiens zinc finger, MYM-type 4... 31 0.86
AL356362-3|CAI22687.1| 1206|Homo sapiens zinc finger, MYM-type 4... 31 0.86
AL160000-1|CAH71313.1| 1548|Homo sapiens zinc finger, MYM-type 4... 31 0.86
AB007885-1|BAA24855.2| 1270|Homo sapiens KIAA0425 protein. 31 0.86
>BC127114-1|AAI27115.1| 1224|Homo sapiens ZMYM4 protein protein.
Length = 1224
Score = 31.1 bits (67), Expect = 0.65
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Frame = -1
Query: 227 STYTDFI-KSILAAMALPQKPIVILNTPGEISTILTFALSHDISYHAISFQSI------- 72
+T DF +S L+ L +KPIV +NT IST + + I H +++Q++
Sbjct: 87 TTSKDFCSQSCLSTYELKKKPIVTINT-NSISTKCSMCQKNAIIRHEVNYQNVVHKLCSD 145
Query: 71 -CFIFFRKDYNL 39
CF FR NL
Sbjct: 146 ACFSKFRSANNL 157
>BC127113-1|AAI27114.1| 1516|Homo sapiens ZMYM4 protein protein.
Length = 1516
Score = 31.1 bits (67), Expect = 0.65
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Frame = -1
Query: 227 STYTDFI-KSILAAMALPQKPIVILNTPGEISTILTFALSHDISYHAISFQSI------- 72
+T DF +S L+ L +KPIV +NT IST + + I H +++Q++
Sbjct: 379 TTSKDFCSQSCLSTYELKKKPIVTINT-NSISTKCSMCQKNAIIRHEVNYQNVVHKLCSD 437
Query: 71 -CFIFFRKDYNL 39
CF FR NL
Sbjct: 438 ACFSKFRSANNL 449
>BC012093-1|AAH12093.2| 1434|Homo sapiens ZMYM4 protein protein.
Length = 1434
Score = 30.7 bits (66), Expect = 0.86
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Frame = -1
Query: 227 STYTDFI-KSILAAMALPQKPIVILNTPGEISTILTFALSHDISYHAISFQSI------- 72
+T DF +S L+ L +KPIV +NT IST + + + H +++Q++
Sbjct: 297 TTSKDFCSQSCLSTYELKKKPIVTINT-NSISTKCSMCQKNAVIRHEVNYQNVVHKLCSD 355
Query: 71 -CFIFFRKDYNL 39
CF FR NL
Sbjct: 356 ACFSKFRSANNL 367
>AL590434-3|CAI12468.1| 1548|Homo sapiens zinc finger, MYM-type 4
protein.
Length = 1548
Score = 30.7 bits (66), Expect = 0.86
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Frame = -1
Query: 227 STYTDFI-KSILAAMALPQKPIVILNTPGEISTILTFALSHDISYHAISFQSI------- 72
+T DF +S L+ L +KPIV +NT IST + + + H +++Q++
Sbjct: 411 TTSKDFCSQSCLSTYELKKKPIVTINT-NSISTKCSMCQKNAVIRHEVNYQNVVHKLCSD 469
Query: 71 -CFIFFRKDYNL 39
CF FR NL
Sbjct: 470 ACFSKFRSANNL 481
>AL356362-7|CAI22691.1| 1548|Homo sapiens zinc finger, MYM-type 4
protein.
Length = 1548
Score = 30.7 bits (66), Expect = 0.86
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Frame = -1
Query: 227 STYTDFI-KSILAAMALPQKPIVILNTPGEISTILTFALSHDISYHAISFQSI------- 72
+T DF +S L+ L +KPIV +NT IST + + + H +++Q++
Sbjct: 411 TTSKDFCSQSCLSTYELKKKPIVTINT-NSISTKCSMCQKNAVIRHEVNYQNVVHKLCSD 469
Query: 71 -CFIFFRKDYNL 39
CF FR NL
Sbjct: 470 ACFSKFRSANNL 481
>AL356362-3|CAI22687.1| 1206|Homo sapiens zinc finger, MYM-type 4
protein.
Length = 1206
Score = 30.7 bits (66), Expect = 0.86
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Frame = -1
Query: 227 STYTDFI-KSILAAMALPQKPIVILNTPGEISTILTFALSHDISYHAISFQSI------- 72
+T DF +S L+ L +KPIV +NT IST + + + H +++Q++
Sbjct: 159 TTSKDFCSQSCLSTYELKKKPIVTINT-NSISTKCSMCQKNAVIRHEVNYQNVVHKLCSD 217
Query: 71 -CFIFFRKDYNL 39
CF FR NL
Sbjct: 218 ACFSKFRSANNL 229
>AL160000-1|CAH71313.1| 1548|Homo sapiens zinc finger, MYM-type 4
protein.
Length = 1548
Score = 30.7 bits (66), Expect = 0.86
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Frame = -1
Query: 227 STYTDFI-KSILAAMALPQKPIVILNTPGEISTILTFALSHDISYHAISFQSI------- 72
+T DF +S L+ L +KPIV +NT IST + + + H +++Q++
Sbjct: 411 TTSKDFCSQSCLSTYELKKKPIVTINT-NSISTKCSMCQKNAVIRHEVNYQNVVHKLCSD 469
Query: 71 -CFIFFRKDYNL 39
CF FR NL
Sbjct: 470 ACFSKFRSANNL 481
>AB007885-1|BAA24855.2| 1270|Homo sapiens KIAA0425 protein.
Length = 1270
Score = 30.7 bits (66), Expect = 0.86
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Frame = -1
Query: 227 STYTDFI-KSILAAMALPQKPIVILNTPGEISTILTFALSHDISYHAISFQSI------- 72
+T DF +S L+ L +KPIV +NT IST + + + H +++Q++
Sbjct: 133 TTSKDFCSQSCLSTYELKKKPIVTINT-NSISTKCSMCQKNAVIRHEVNYQNVVHKLCSD 191
Query: 71 -CFIFFRKDYNL 39
CF FR NL
Sbjct: 192 ACFSKFRSANNL 203
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,780,515
Number of Sequences: 237096
Number of extensions: 542523
Number of successful extensions: 1123
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1122
length of database: 76,859,062
effective HSP length: 58
effective length of database: 63,107,494
effective search space used: 1325257374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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