Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1a02
         (239 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    23   0.52 
EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor 1-a...    23   0.52 
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   0.52 
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    23   0.52 
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   1.2  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   2.8  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                20   4.9  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     19   6.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          19   8.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      19   8.5  

>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 23.0 bits (47), Expect = 0.52
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -1

Query: 167 IVILNTPGEISTILTFALSHDISYHAISFQSI 72
           +++LN PG+IS   T  L    ++ A  F  I
Sbjct: 344 VIVLNHPGQISNGYTPVLDCHTAHIACKFAEI 375


>EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor
           1-alpha protein.
          Length = 119

 Score = 23.0 bits (47), Expect = 0.52
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -1

Query: 167 IVILNTPGEISTILTFALSHDISYHAISFQSI 72
           +++LN PG+IS   T  L    ++ A  F  I
Sbjct: 55  VIVLNHPGQISNGYTPVLDCHTAHIACKFAEI 86


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.0 bits (47), Expect = 0.52
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 221 YTDFIKSILAAMALPQKPIV 162
           YTDF+KS+     LP++ ++
Sbjct: 211 YTDFLKSVPIFKNLPEETLI 230


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 23.0 bits (47), Expect = 0.52
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -1

Query: 167 IVILNTPGEISTILTFALSHDISYHAISFQSI 72
           +++LN PG+IS   T  L    ++ A  F  I
Sbjct: 344 VIVLNHPGQISNGYTPVLDCHTAHIACKFADI 375


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 1.2
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 105 YFISCYLVSIHLFHF 61
           Y+ISC  +S++  HF
Sbjct: 187 YYISCPEISVNFAHF 201


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 20.6 bits (41), Expect = 2.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 21 DEFDLFEIIIFSEENETN 74
          DE + FEI  +  ENE N
Sbjct: 4  DEVESFEITDYDLENEFN 21


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 19.8 bits (39), Expect = 4.9
 Identities = 9/29 (31%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = +1

Query: 124 VKMVLISPG--VFSMTIGFCGSAIAARID 204
           VK+++I  G  +  +T+  CG+ +  R+D
Sbjct: 120 VKVLMIEQGASLSLITMELCGTTLQNRLD 148


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 19.4 bits (38), Expect = 6.4
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -3

Query: 87  LVSIHLFH 64
           L++IHLFH
Sbjct: 176 LINIHLFH 183


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 19.0 bits (37), Expect = 8.5
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 142 KLAPF*LLHCPMIFHIMLSRFNP 74
           K+  + L H P  FHI ++   P
Sbjct: 489 KIRQYRLNHKPFNFHITINADKP 511


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 19.0 bits (37), Expect = 8.5
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 142 KLAPF*LLHCPMIFHIMLSRFNP 74
           K+  + L H P  FHI ++   P
Sbjct: 489 KIRQYRLNHKPFNFHITINADKP 511


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,844
Number of Sequences: 438
Number of extensions: 1116
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4024224
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)