Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19p19
(694 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 32 0.50
01_05_0653 - 23948911-23948937,23949031-23949141,23949361-239494... 31 0.66
01_05_0652 - 23934604-23934636,23934783-23934893,23935000-239351... 31 0.66
01_01_0489 + 3608720-3608811,3609326-3609431,3609518-3609581,360... 31 0.87
07_03_1022 - 23353054-23353263,23353399-23353505,23354613-23354961 31 1.1
03_02_0594 - 9695616-9696042,9696646-9697260,9697410-9697717,970... 31 1.1
08_02_0644 - 19658270-19658626,19659142-19659218,19659256-196594... 30 2.0
05_05_0382 + 24547680-24548760,24548887-24549033,24549389-24550023 29 3.5
05_03_0069 + 8004235-8004350,8004927-8005215,8005314-8005375,800... 29 3.5
05_01_0251 + 1901709-1901864,1901968-1901999,1902534-1902664,190... 29 3.5
04_04_1393 - 33204699-33204806,33204927-33205164,33205581-332058... 29 3.5
03_05_0898 + 28610123-28610203,28611190-28611271,28611666-286117... 29 3.5
02_03_0349 + 18010414-18014283 29 3.5
02_04_0005 - 18843061-18843201,18843309-18843440,18844457-188453... 29 4.6
12_01_1068 - 11052769-11052943,11053103-11053182,11053304-110534... 28 6.1
07_03_0117 + 13589997-13590998 28 8.1
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 31.9 bits (69), Expect = 0.50
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +3
Query: 90 YNTPPPPLRY-PSNPATAIFTNAQTYN-NAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYN 263
YN P Y P++P+ + + + +Y+ +P Y P + N TS S S S + +P +
Sbjct: 1697 YNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTS 1756
Query: 264 KSKEPT 281
S PT
Sbjct: 1757 PSYSPT 1762
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +3
Query: 87 YYNTPPPPLRYPSNPATAIFTNAQTYN-NAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYN 263
Y +P P P++P+ + + +Y+ +P Y T + TS S S S + +P +
Sbjct: 1704 YSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTS 1763
Query: 264 KSKEPT 281
S PT
Sbjct: 1764 PSYSPT 1769
>01_05_0653 -
23948911-23948937,23949031-23949141,23949361-23949441,
23949865-23949984,23950088-23950252,23950344-23950493,
23950565-23950674,23951401-23951518,23951597-23951827,
23952345-23952524,23953639-23953908,23954930-23954979,
23955213-23955288,23955396-23955483,23956010-23956101,
23956200-23956529,23957484-23957593,23957810-23957907,
23959538-23959566
Length = 811
Score = 31.5 bits (68), Expect = 0.66
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 140 HIHQRANLQQRARVRAAYDARQQNGHEPQQQHKLGSD 250
H HQ+ +QQ RAA +QQ + QQQ +L D
Sbjct: 100 HQHQQIQMQQMLLQRAAQQQQQQQQQQQQQQQQLHRD 136
>01_05_0652 -
23934604-23934636,23934783-23934893,23935000-23935188,
23935893-23936012,23936109-23936273,23936638-23936790,
23936867-23936976,23937280-23937397,23938197-23938427,
23938984-23939175,23939661-23939945,23940637-23940686,
23940846-23940921,23941048-23941135,23941689-23941771,
23941883-23942248,23942462-23942476,23942909-23943018,
23943134-23943231,23943961-23944019
Length = 883
Score = 31.5 bits (68), Expect = 0.66
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 149 QRANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQRTD 280
Q +QQ RAA +QQ + QQQ + + QQ+QR D
Sbjct: 120 QHIQMQQMLLQRAAQQQQQQQQQQQQQQQQQQQQQQQQQQQRRD 163
>01_01_0489 +
3608720-3608811,3609326-3609431,3609518-3609581,
3609905-3609965,3610017-3610144,3610236-3610385,
3610537-3610791,3611060-3611265,3611469-3611696,
3612161-3612259
Length = 462
Score = 31.1 bits (67), Expect = 0.87
Identities = 22/81 (27%), Positives = 40/81 (49%)
Frame = -3
Query: 533 LGRVALSQLFLQPNQVAYHGLLRFKPLYHVYVDRVRVDAHVTNSVYKMNHERTKF*HVIA 354
+GR+ P+ A GLLR P++ V++D VRV + +Y++ + K+ +A
Sbjct: 247 VGRLVKGSSKPHPSLPARGGLLRTAPVHEVHLDLVRVS---SGKIYRLRNPSRKY---LA 300
Query: 353 PVISNNFLNKIHTFVVPNRFA 291
+ S + N + PN +A
Sbjct: 301 SLSSYDSSNPTKDWGFPNIYA 321
>07_03_1022 - 23353054-23353263,23353399-23353505,23354613-23354961
Length = 221
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 99 PPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDT 218
PPPP P +P A+F +A+ +P P+TR ++ T
Sbjct: 5 PPPPSAPPPSPPRAVFPSARCCLPSPHRFLPSTRRKRLVT 44
>03_02_0594 -
9695616-9696042,9696646-9697260,9697410-9697717,
9700145-9700235,9700698-9700759,9701256-9702962,
9703789-9703870,9703972-9704057,9704855-9704968,
9705113-9705163,9705261-9705358,9707084-9707546
Length = 1367
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 303 WYNKCVDFVQKIIRYYRCNDMSELSPLMIHFINTIRDMCIDTNPINVNV-VKRFESE 470
WY +C+D Q+ +R RC+D + P + + ++ C ++ + V RF +E
Sbjct: 473 WYRECLDLFQEFVR-VRCSDGDGVGPNGV-TVTSVLHACAQLKVVDFGIGVHRFAAE 527
>08_02_0644 -
19658270-19658626,19659142-19659218,19659256-19659430,
19659543-19659596,19659691-19659858,19660756-19660953,
19661546-19661632,19661739-19661827,19662499-19662955
Length = 553
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +2
Query: 89 LQHPSAAAEVSL*SGNGHIHQRANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQE 268
L P AAA SL + R R+++ AR++ + + + G D +V +E
Sbjct: 7 LSFPVAAASKSLSFPAAAQSNKGTPAARKRIKSGGGAREKKENSGGAREEQGKDDSVGEE 66
Query: 269 Q---RTDARRRR 295
Q R D RRRR
Sbjct: 67 QVQRRRDGRRRR 78
>05_05_0382 + 24547680-24548760,24548887-24549033,24549389-24550023
Length = 620
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +2
Query: 89 LQHPSAAAEVSL*SGNGHIHQRANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQE 268
L SA A V+L S H H RA A + +N P G+DR+ + E
Sbjct: 540 LPRRSACASVALKSSGCHHHVRAGAAAAAHGSVRTSRQSRNNAPPMAPTIRGADRSSEGE 599
Query: 269 QR 274
+R
Sbjct: 600 RR 601
>05_03_0069 +
8004235-8004350,8004927-8005215,8005314-8005375,
8005516-8005602,8005667-8005723,8005940-8006004,
8006292-8006320
Length = 234
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +3
Query: 102 PPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKEPT 281
PPP + NP+T I + + P P + +K T +++ST AI S E T
Sbjct: 146 PPPAPHTDNPSTTIHNTGASSKSTP---PEISLADKTPTEKTSSTRKRAIDFTKDSIEET 202
>05_01_0251 +
1901709-1901864,1901968-1901999,1902534-1902664,
1902740-1902821,1902928-1903054,1903369-1903686,
1903785-1903846,1903988-1904074,1904139-1904195,
1906113-1906197,1906916-1907185,1908158-1908254,
1908390-1908436,1908826-1908939,1909024-1909117,
1909360-1909457,1910356-1910455,1911445-1911521,
1911824-1913122
Length = 1110
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +3
Query: 102 PPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKEPT 281
PPP + NP+T I + + P P + +K T +++ST AI S E T
Sbjct: 293 PPPAPHTDNPSTTIHNTGASSKSTP---PEISLADKTPTEKTSSTTKRAIDFTKDSIEET 349
>04_04_1393 -
33204699-33204806,33204927-33205164,33205581-33205825,
33206229-33206339,33206645-33206743,33207684-33207731,
33207882-33207999,33208085-33208115,33208700-33208806,
33209644-33209725,33210010-33210104,33210579-33210664,
33211074-33211195,33211613-33211824,33212362-33212510,
33212755-33212982
Length = 692
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +3
Query: 333 KIIRYYRCNDMSELSPLMIHFINTIRDM 416
KII Y+ N+++++S L HFI+ + D+
Sbjct: 599 KIIESYKSNNVNQVSNLCQHFIDLVNDL 626
>03_05_0898 +
28610123-28610203,28611190-28611271,28611666-28611721,
28612253-28612366,28612484-28612546,28612633-28612752,
28612850-28612950,28613097-28613156,28613243-28613342,
28613421-28613575,28613661-28613756,28614269-28614403,
28614510-28614573,28614648-28614729,28615038-28615213,
28615302-28615378,28615637-28615769,28615939-28616055,
28616394-28616398,28616564-28616684,28616711-28617751
Length = 992
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +3
Query: 45 RVQIKSMTDERGNFYYNTPPPP---LRYPSNPATAIFTNAQTYNNAPG 179
+V I+S+ RG FY+N P L + P T +F + + PG
Sbjct: 821 KVPIRSIAACRGKFYFNATPESVGVLEFTPTPTTPVFGSIAIADPLPG 868
>02_03_0349 + 18010414-18014283
Length = 1289
Score = 29.1 bits (62), Expect = 3.5
Identities = 25/104 (24%), Positives = 47/104 (45%)
Frame = +3
Query: 321 DFVQKIIRYYRCNDMSELSPLMIHFINTIRDMCIDTNPINVNVVKRFESEETMIRHLIRL 500
D + ++ R N+ + +S NTIR +C+D I++ VV++ S+ +R LI
Sbjct: 536 DLLHELARSASVNECARVSISSEKIPNTIRHLCLDV--ISLTVVEQI-SQSKKLRTLIMH 592
Query: 501 QKELGQGNAAESLPSDSNIFQASFVLNSLPAYAQKFYNGGADML 632
+E Q L + ++ VL+ Y K + D++
Sbjct: 593 FQEQDQAEQEHMLKKVLAVTKSLRVLSLTANYPFKLPDAVGDLV 636
>02_04_0005 -
18843061-18843201,18843309-18843440,18844457-18845315,
18845884-18845973,18846748-18846869,18846950-18847049,
18847151-18847205,18847275-18847365,18847453-18847572,
18847681-18847780,18847890-18848018,18848099-18848201,
18848670-18848743,18848848-18848933,18849297-18849358,
18849454-18849541,18849937-18850029
Length = 814
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +3
Query: 75 RGNFYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTS 221
+G+ Y PPPP P A+F + Y PPT R+ ++ S
Sbjct: 665 KGSTCYPPPPPPSSTPPVEPVAVFPPPPSPACGVYYPPPTVREPVINRS 713
>12_01_1068 -
11052769-11052943,11053103-11053182,11053304-11053401,
11053487-11053627,11053701-11053841,11053933-11054017,
11055296-11055826,11055926-11055940
Length = 421
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +3
Query: 90 YNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPY--N 263
++ PPP Y + A ++++ +Y PP D + +S S +VA AP
Sbjct: 77 WDPPPPSSPYSAGHAADEYSSSSSYRRRGASAPP-AEDVVVSSSYSRPAAAVASAPQACT 135
Query: 264 KSKEPTLDAGES 299
S P L A E+
Sbjct: 136 VSSAPPLRAVET 147
>07_03_0117 + 13589997-13590998
Length = 333
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/43 (30%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +3
Query: 525 AAESLPSDSNIFQASFVLNSLPAYAQKFYNGG-ADMLGKDALA 650
++++ PS +N+ + + + S PA+A++ GG A ++ K A+A
Sbjct: 18 SSDAAPSPANLSRTATAICSTPAFAREMVAGGVAGVVAKTAVA 60
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,252,829
Number of Sequences: 37544
Number of extensions: 389757
Number of successful extensions: 1624
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1598
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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