Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19p11
         (498 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    22   2.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   2.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   2.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   2.7  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   8.1  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   8.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   8.1  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   8.1  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   8.1  

>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -1

Query: 264 CRHNPLR*YNGCKYLRHVYTVTYIFFKVLYTKISQ 160
           C H  +R + G K+  +    T+IFF   + + S+
Sbjct: 17  CSHRIVREHLGLKHDNYYELETHIFFDDAFIRTSE 51


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -1

Query: 264 CRHNPLR*YNGCKYLRHVYTVTYIFFKVLYTKISQ 160
           C H  +R + G K+  +    T+IFF   + + S+
Sbjct: 331 CSHRIVREHLGLKHDNYYELETHIFFDDAFIRTSE 365


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -1

Query: 264 CRHNPLR*YNGCKYLRHVYTVTYIFFKVLYTKISQ 160
           C H  +R + G K+  +    T+IFF   + + S+
Sbjct: 564 CSHRIVREHLGLKHDNYYELETHIFFDDAFIRTSE 598


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -1

Query: 264 CRHNPLR*YNGCKYLRHVYTVTYIFFKVLYTKISQ 160
           C H  +R + G K+  +    T+IFF   + + S+
Sbjct: 564 CSHRIVREHLGLKHDNYYELETHIFFDDAFIRTSE 598


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -1

Query: 93  SFHVWRLKISIIFHNKTPVK 34
           +++V    I +IFH+  P+K
Sbjct: 153 TYYVCNTTIFLIFHSVLPIK 172


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 411 YKSFAIE*FSMCII 370
           YK FAIE F M ++
Sbjct: 145 YKQFAIEYFQMYVL 158


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 411 YKSFAIE*FSMCII 370
           YK FAIE F M ++
Sbjct: 145 YKQFAIEYFQMYVL 158


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -2

Query: 350 IIKT*SNHSSKNIVVPSLHCM 288
           ++ T + H+S N+ V  L C+
Sbjct: 120 LLNTLTFHTSSNLTVSGLRCV 140


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -2

Query: 350 IIKT*SNHSSKNIVVPSLHCM 288
           ++ T + H+S N+ V  L C+
Sbjct: 120 LLNTLTFHTSSNLTVSGLRCV 140


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,008
Number of Sequences: 336
Number of extensions: 3009
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)