Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19p11
         (498 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058469-1|AAL13698.1|  596|Drosophila melanogaster GH27401p pro...    75   4e-14
AE013599-1968|AAF58194.1|  596|Drosophila melanogaster CG12855-P...    75   4e-14
AE014134-1162|AAN10598.1| 2922|Drosophila melanogaster CG11321-P...    31   1.1  
AE014134-1161|AAF52435.2| 2594|Drosophila melanogaster CG11321-P...    31   1.1  
AY095013-1|AAM11341.1|  961|Drosophila melanogaster GH24371p pro...    29   2.6  
AE014297-3030|AAN13880.1|  961|Drosophila melanogaster CG31343-P...    29   2.6  
AE013599-2560|AAF57790.2|  624|Drosophila melanogaster CG6362-PA...    28   8.1  

>AY058469-1|AAL13698.1|  596|Drosophila melanogaster GH27401p
           protein.
          Length = 596

 Score = 75.4 bits (177), Expect = 4e-14
 Identities = 45/139 (32%), Positives = 77/139 (55%), Gaps = 4/139 (2%)
 Frame = +1

Query: 85  MKALLIFDSVNDLVFSKWDDSFIRHLRNFSVQD--FEENVS-DSVNVSQIFTPIILSQRV 255
           M  L++F+S ND+V+ K ++   + +R+ +      +   S DS  + QIF+PI+ SQR+
Sbjct: 1   MNGLIVFNSANDVVYQKLNEPLAQKIRSVATTQGLLQSGGSLDSNILLQIFSPIVGSQRI 60

Query: 256 MAAQFGNTYSSMQCKDGTTIFFDEWLDHVFIIICEDCLDDAHRELLDCKTLVQHICGQNI 435
           M  QF N YSS+QC+ G  + F E L   F+ I +  ++   R++    TL ++  G N+
Sbjct: 61  MQCQFDNAYSSLQCEQGFNLVFGELLGFTFLKIGQIPVELLGRQMGVAITLTRYCYGANL 120

Query: 436 NLLHS-PIYQDWLSVLLDC 489
               +  + Q+ L+  LDC
Sbjct: 121 FAAQAGAMQQELLTQCLDC 139


>AE013599-1968|AAF58194.1|  596|Drosophila melanogaster CG12855-PA
           protein.
          Length = 596

 Score = 75.4 bits (177), Expect = 4e-14
 Identities = 45/139 (32%), Positives = 77/139 (55%), Gaps = 4/139 (2%)
 Frame = +1

Query: 85  MKALLIFDSVNDLVFSKWDDSFIRHLRNFSVQD--FEENVS-DSVNVSQIFTPIILSQRV 255
           M  L++F+S ND+V+ K ++   + +R+ +      +   S DS  + QIF+PI+ SQR+
Sbjct: 1   MNGLIVFNSANDVVYQKLNEPLAQKIRSVATTQGLLQSGGSLDSNILLQIFSPIVGSQRI 60

Query: 256 MAAQFGNTYSSMQCKDGTTIFFDEWLDHVFIIICEDCLDDAHRELLDCKTLVQHICGQNI 435
           M  QF N YSS+QC+ G  + F E L   F+ I +  ++   R++    TL ++  G N+
Sbjct: 61  MQCQFDNAYSSLQCEQGFNLVFGELLGFTFLKIGQIPVELLGRQMGVAITLTRYCYGANL 120

Query: 436 NLLHS-PIYQDWLSVLLDC 489
               +  + Q+ L+  LDC
Sbjct: 121 FAAQAGAMQQELLTQCLDC 139


>AE014134-1162|AAN10598.1| 2922|Drosophila melanogaster CG11321-PB,
            isoform B protein.
          Length = 2922

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 445  ARGLCFAHKCVVQEFCNRVVLYVHHPNN 362
            AR      KC V  +C ++ L+ HHP N
Sbjct: 2752 ARPFMMGAKCTVSTYCAKLGLHAHHPRN 2779


>AE014134-1161|AAF52435.2| 2594|Drosophila melanogaster CG11321-PA,
            isoform A protein.
          Length = 2594

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 445  ARGLCFAHKCVVQEFCNRVVLYVHHPNN 362
            AR      KC V  +C ++ L+ HHP N
Sbjct: 2424 ARPFMMGAKCTVSTYCAKLGLHAHHPRN 2451


>AY095013-1|AAM11341.1|  961|Drosophila melanogaster GH24371p
           protein.
          Length = 961

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
 Frame = +1

Query: 115 NDLVFSKWDDSFIRHLRNFSVQDFEENVSDSVNVSQ-IFTPIILSQRVMAAQFGNTYSSM 291
           ND+ F  WD   I H+ +++     + ++ +V ++  + TP  +S R       NT+S  
Sbjct: 392 NDIAFPLWDTYQIFHVNDYNSALLNDALASAVPMTHYVQTPSEISNRY------NTFSYA 445

Query: 292 QCKDGTTIFFDEWLDHVF 345
           +      +F + W D VF
Sbjct: 446 KPASVLYMFKNAWTDKVF 463


>AE014297-3030|AAN13880.1|  961|Drosophila melanogaster CG31343-PA
           protein.
          Length = 961

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
 Frame = +1

Query: 115 NDLVFSKWDDSFIRHLRNFSVQDFEENVSDSVNVSQ-IFTPIILSQRVMAAQFGNTYSSM 291
           ND+ F  WD   I H+ +++     + ++ +V ++  + TP  +S R       NT+S  
Sbjct: 392 NDIAFPLWDTYQIFHVNDYNSALLNDALASAVPMTHYVQTPSEISNRY------NTFSYA 445

Query: 292 QCKDGTTIFFDEWLDHVF 345
           +      +F + W D VF
Sbjct: 446 KPASVLYMFKNAWTDKVF 463


>AE013599-2560|AAF57790.2|  624|Drosophila melanogaster CG6362-PA
           protein.
          Length = 624

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +2

Query: 191 KM*VTV*TCLRYLHPLYYRRGLWRHNLVTHTPPCSVKMVQ 310
           +M V V  CLR+L P    RGL   +L+  TPP  ++ V+
Sbjct: 2   EMEVDVEECLRWL-PFATGRGLMEAHLLPKTPPLQLQKVE 40


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,980,955
Number of Sequences: 53049
Number of extensions: 479244
Number of successful extensions: 856
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)