Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19p04
(560 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93; Eukaryo... 287 2e-76
UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN full... 262 4e-69
UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82; Eukaryo... 254 1e-66
UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8; Euteleostomi... 226 2e-58
UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21; Eukaryo... 199 4e-50
UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4; Eukaryot... 185 7e-46
UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19; Eukaryo... 168 9e-41
UniRef50_UPI000049933B Cluster: conserved hypothetical protein; ... 143 3e-33
UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;... 143 3e-33
UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces ... 113 3e-24
UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamb... 111 8e-24
UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitoz... 101 9e-21
UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillard... 96 4e-19
UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella... 74 2e-12
UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7; Archaea... 67 2e-10
UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5; Archaea... 65 9e-10
UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma j... 62 1e-08
UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5; Euryarc... 59 6e-08
UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6; Archaea... 55 1e-06
UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3; Euryarc... 53 4e-06
UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4; Archaea... 52 7e-06
UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3; Desulfu... 52 1e-05
UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1; Methano... 51 2e-05
UniRef50_P61300 Cluster: 30S ribosomal protein S8e; n=5; Methano... 50 3e-05
UniRef50_A0RXG5 Cluster: Ribosomal protein S8E; n=2; Thermoprote... 48 1e-04
UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole gen... 48 2e-04
UniRef50_Q2NEU6 Cluster: 30S ribosomal protein S8e; n=1; Methano... 47 3e-04
UniRef50_Q2W531 Cluster: TPR repeat; n=3; Magnetospirillum|Rep: ... 36 0.49
UniRef50_UPI0000DB7956 Cluster: PREDICTED: similar to Deformed C... 32 8.0
UniRef50_A5V4W5 Cluster: TonB-dependent receptor precursor; n=1;... 32 8.0
UniRef50_A7F1W3 Cluster: Putative uncharacterized protein; n=1; ... 32 8.0
>UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93;
Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens
(Human)
Length = 208
Score = 287 bits (703), Expect = 2e-76
Identities = 131/176 (74%), Positives = 148/176 (84%)
Frame = +1
Query: 31 MGISRDHWHKRRATGGKRAPIXKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 210
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRL
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRL 60
Query: 211 DTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVXATPFRQWYESHYTLP 390
D GNFSWGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++ +TP+RQWYESHY LP
Sbjct: 61 DVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALP 120
Query: 391 LGRXKGAKLTEAXEAIINKKRSXKTARKYLARQRLAKVEGALKXQFHTGRLLACVA 558
LGR KGAKLT E I+NKKRS K +KY R++ AK+ L+ QF G+LLAC+A
Sbjct: 121 LGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIA 176
>UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence; n=9;
Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence - Mus
musculus (Mouse)
Length = 152
Score = 262 bits (642), Expect = 4e-69
Identities = 119/149 (79%), Positives = 130/149 (87%)
Frame = +1
Query: 31 MGISRDHWHKRRATGGKRAPIXKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 210
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRL
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRL 60
Query: 211 DTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVXATPFRQWYESHYTLP 390
D GNFSWGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++ +TP+RQWYESHY LP
Sbjct: 61 DVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALP 120
Query: 391 LGRXKGAKLTEAXEAIINKKRSXKTARKY 477
LGR KGAKLT E I+NKKRS K +KY
Sbjct: 121 LGRKKGAKLTPEEEEILNKKRSKKIQKKY 149
>UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82;
Eukaryota|Rep: 40S ribosomal protein S8 - Drosophila
melanogaster (Fruit fly)
Length = 208
Score = 254 bits (621), Expect = 1e-66
Identities = 120/178 (67%), Positives = 142/178 (79%), Gaps = 2/178 (1%)
Frame = +1
Query: 31 MGISRDHWHKRRATGGKRAPIXKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 210
MGISRD HKRRATGGKR + KKRK+ELGRPAANT+LG R+H VR+RGGNTK RALRL
Sbjct: 1 MGISRDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRL 60
Query: 211 DTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVXATPFRQWYESHYTLP 390
+TGNF+W SE RKTRI DVVYNASNNELVRTKTLVKN+IVV+ ATPFRQWYE+HY LP
Sbjct: 61 ETGNFAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLP 120
Query: 391 LGRXKGAKLTEAXEA--IINKKRSXKTARKYLARQRLAKVEGALKXQFHTGRLLACVA 558
LGR + K + + ++ KKRS K +KYL RQ+ KVE AL+ QF +GR+LAC++
Sbjct: 121 LGRKRNPKHAQKEDENDVLTKKRSEKVMKKYLERQKYGKVEQALEDQFTSGRILACIS 178
>UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8;
Euteleostomi|Rep: Ribosomal protein S8 - Homo sapiens
(Human)
Length = 188
Score = 226 bits (553), Expect = 2e-58
Identities = 114/176 (64%), Positives = 131/176 (74%)
Frame = +1
Query: 31 MGISRDHWHKRRATGGKRAPIXKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 210
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGG
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGG--------- 51
Query: 211 DTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVXATPFRQWYESHYTLP 390
C TRKTRIIDVVYNASNNELVRTKTLVKN IV++ +TP+RQWYESHY LP
Sbjct: 52 ----------C-TRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALP 100
Query: 391 LGRXKGAKLTEAXEAIINKKRSXKTARKYLARQRLAKVEGALKXQFHTGRLLACVA 558
LGR KGAKLT E I+NKKRS K +KY R++ AK+ L+ QF G+LLAC+A
Sbjct: 101 LGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIA 156
>UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21;
Eukaryota|Rep: 40S ribosomal protein S8 - Zea mays
(Maize)
Length = 221
Score = 199 bits (485), Expect = 4e-50
Identities = 104/185 (56%), Positives = 127/185 (68%), Gaps = 9/185 (4%)
Frame = +1
Query: 31 MGISRDHWHKRRATGGKRAPIXKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALR 207
MGISRD HKRRATGGK+ KKRKYELGR ANT+L + + VR RGGN K+RALR
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 208 LDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVXATPFRQWYESHYTL 387
LDTGN+SWGSE TRKTRI+DVVYNASNNELVRT+TLVK+AIV V A PF+QWY +HY +
Sbjct: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120
Query: 388 PLGRXK--------GAKLTEAXEAIINKKRSXKTARKYLARQRLAKVEGALKXQFHTGRL 543
+GR K A+ E A K+S RK R+ ++ ++ QF +GRL
Sbjct: 121 DIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGRL 180
Query: 544 LACVA 558
LAC++
Sbjct: 181 LACIS 185
>UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4;
Eukaryota|Rep: 40S ribosomal protein S8 - Theileria
parva
Length = 188
Score = 185 bits (450), Expect = 7e-46
Identities = 101/176 (57%), Positives = 122/176 (69%)
Frame = +1
Query: 31 MGISRDHWHKRRATGGKRAPIXKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 210
MGISRD HKRR TGG+ KKRKYELGRP++NT+LG + + VR RGGN K+RALRL
Sbjct: 1 MGISRDSRHKRRLTGGRYPVHKKKRKYELGRPSSNTKLGSKLVRKVRCRGGNLKFRALRL 60
Query: 211 DTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVXATPFRQWYESHYTLP 390
D+GNFSWGS+ TRKTR++DVVYNAS+NELVRTKTLVKNAIV V TPF+ W+++HY L
Sbjct: 61 DSGNFSWGSQNVTRKTRVMDVVYNASSNELVRTKTLVKNAIVTVDPTPFKLWFKTHYGLE 120
Query: 391 LGRXKGAKLTEAXEAIINKKRSXKTARKYLARQRLAKVEGALKXQFHTGRLLACVA 558
LG K +E +A S K A A V L QF +GRLLAC++
Sbjct: 121 LG-----KSSEDPQA------SEKVA---------ALVPRTLLDQFSSGRLLACIS 156
>UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19;
Eukaryota|Rep: 40S ribosomal protein S8 - Leishmania
major
Length = 220
Score = 168 bits (408), Expect = 9e-41
Identities = 94/186 (50%), Positives = 115/186 (61%), Gaps = 13/186 (6%)
Frame = +1
Query: 31 MGISRDHWHKRRATGGKRAPIXKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 210
MGI R HKR+ TGGK K+ K ELGR ANTRLG +R+ VR+RGGN K RALRL
Sbjct: 1 MGIVRSRLHKRKITGGKTKIHRKRMKAELGRLPANTRLGARRVSPVRARGGNFKIRALRL 60
Query: 211 DTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVXATPFRQWYESHYTLP 390
DTGNF+W SE + R++DVVYNA++NELVRTKTLVKN IV V A PF++WY HY +
Sbjct: 61 DTGNFAWASEAIAHRVRLLDVVYNATSNELVRTKTLVKNCIVAVDAAPFKRWYAKHYGID 120
Query: 391 L-GRXKGAKLTEAXE--------AIINK----KRSXKTARKYLARQRLAKVEGALKXQFH 531
L K K A E A +K K S K R++ R+R +VE A+ Q
Sbjct: 121 LDADKKSTKAAVAAEKKGRKSAHAAADKYDVNKASPKLQREWTRRRRNHRVEKAIADQLR 180
Query: 532 TGRLLA 549
GR+LA
Sbjct: 181 EGRVLA 186
>UniRef50_UPI000049933B Cluster: conserved hypothetical protein;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 237
Score = 143 bits (346), Expect = 3e-33
Identities = 77/166 (46%), Positives = 103/166 (62%), Gaps = 4/166 (2%)
Frame = +1
Query: 31 MGISRDHWHKRRATGGKRAPIXKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 210
MGI+RD HKRRATGGK+ + KK+K +GR ANTRLG R+H VR R G K RALRL
Sbjct: 1 MGITRDSRHKRRATGGKKNSMQKKKKNTMGRQPANTRLGAIRVHDVRCRYGIIKRRALRL 60
Query: 211 DTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVXATPFRQWYESHYTLP 390
+ GNFSW S+ T+ T+I++VVYNAS+N+ VRT TLVK AI+ + PFR W+ Y
Sbjct: 61 ENGNFSWASQSITKGTKILNVVYNASDNDFVRTNTLVKGAIIEIDPAPFRLWFLKFYGKD 120
Query: 391 LGRXKGAKLTEAXEAIINKK----RSXKTARKYLARQRLAKVEGAL 516
+ K E+ KK + + K +A Q++A+ + AL
Sbjct: 121 IASTDYYKSLESATFKTEKKVVVPKEEENKEKTIA-QQIAETQVAL 165
>UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;
Zea mays|Rep: Putative 40S ribosomal protein S8 - Zea
mays (Maize)
Length = 245
Score = 143 bits (346), Expect = 3e-33
Identities = 68/111 (61%), Positives = 85/111 (76%), Gaps = 1/111 (0%)
Frame = +1
Query: 76 GKRAPIXKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 252
G P+ +++ YELGR ANT+L + + VR RGGNTK+RALR DT N+SWGSE TR
Sbjct: 113 GPFCPLQEEQGYELGRQPANTKLSSNKTVRRVRVRGGNTKWRALRFDTCNYSWGSEALTR 172
Query: 253 KTRIIDVVYNASNNELVRTKTLVKNAIVVVXATPFRQWYESHYTLPLGRXK 405
KTRI+DVVY A+NNELVRT+TLVK+AIV V A PF+QWY +HY + +GR K
Sbjct: 173 KTRILDVVYIATNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKK 223
>UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces
capsulatus NAm1|Rep: Ribosomal protein S8 - Ajellomyces
capsulatus NAm1
Length = 141
Score = 113 bits (272), Expect = 3e-24
Identities = 53/81 (65%), Positives = 62/81 (76%)
Frame = +1
Query: 31 MGISRDHWHKRRATGGKRAPIXKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 210
MGISRD HKR ATG KR+ KKR +E GR ANTR+GP+RIH VR+RGGN K+R LRL
Sbjct: 1 MGISRDSRHKRSATGAKRSHYRKKRAFEKGRQPANTRIGPKRIHLVRTRGGNQKFRGLRL 60
Query: 211 DTGNFSWGSECSTRKTRIIDV 273
++GNFSWGSE RK R+I V
Sbjct: 61 ESGNFSWGSEGIARKVRVIVV 81
>UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamblia
ATCC 50803|Rep: Ribosomal protein S8 - Giardia lamblia
ATCC 50803
Length = 174
Score = 111 bits (268), Expect = 8e-24
Identities = 58/119 (48%), Positives = 76/119 (63%), Gaps = 9/119 (7%)
Frame = +1
Query: 31 MGISRDHWHKRRATGGKRAPIXKKRKYELGRPAANTRL---------GPQRIHSVRSRGG 183
MGI+ D +KR TG + KKRKY LGR ANT+L Q+I ++R RGG
Sbjct: 1 MGITHDKMYKRSKTGAVQGKWHKKRKYNLGRQPANTKLIVKVTSKKNEGQKISTIRCRGG 60
Query: 184 NTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVXATPFR 360
N K RALRL G+F+WGS + K RI+ VVYN+++NELVRT TLVK +V + + PF+
Sbjct: 61 NIKRRALRLSHGSFAWGSADISHKARILQVVYNSTSNELVRTNTLVKGCVVQIDSAPFK 119
>UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitozoon
cuniculi|Rep: Ribosomal protein S8 - Encephalitozoon
cuniculi
Length = 173
Score = 101 bits (243), Expect = 9e-21
Identities = 49/110 (44%), Positives = 71/110 (64%)
Frame = +1
Query: 31 MGISRDHWHKRRATGGKRAPIXKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 210
MGI+ HKRR TG K KKR G ++T++G +++ VR RGGN KY+ALRL
Sbjct: 1 MGINHRGDHKRRKTGAKAVISRKKRNNRAGSQPSSTKIGERKVTPVRVRGGNRKYKALRL 60
Query: 211 DTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVXATPFR 360
D G+F + + R +++ VVY+ S+NELVRT TL K+++V + A PF+
Sbjct: 61 DMGHFKFITTGKFRMAKLLQVVYHPSSNELVRTNTLTKSSVVKISAEPFK 110
>UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillardia
theta|Rep: 40S ribosomal protein S8 - Guillardia theta
(Cryptomonas phi)
Length = 178
Score = 96.3 bits (229), Expect = 4e-19
Identities = 49/102 (48%), Positives = 68/102 (66%)
Frame = +1
Query: 31 MGISRDHWHKRRATGGKRAPIXKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 210
MGI+R+ HKR++TGG ++ KKR + GR +NT++G + + +R RGG K RAL L
Sbjct: 1 MGINREGLHKRKSTGGLKSCWRKKRNHAKGRQPSNTKIGRRCVVKLRVRGGGVKTRALFL 60
Query: 211 DTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 336
GNFS+ S T K +I+ V +N S+NELVRT TL K +IV
Sbjct: 61 SYGNFSFVSIQRTFKAKILSVAFNESSNELVRTNTLTKGSIV 102
>UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella
natans|Rep: Ribosomal protein S8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 176
Score = 74.1 bits (174), Expect = 2e-12
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Frame = +1
Query: 58 KRRATGGKRAPIXKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWG 234
K++ TGGK+ I KK+ + G NT L I R RGGN K++A+ L G+F W
Sbjct: 3 KKKLTGGKKKKISKKKNHSKGNNPTNTVLRRANFIKMTRVRGGNFKFKAISLGKGSFQWK 62
Query: 235 SECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVXATPF 357
+ ++ ++I+ V+YN +N +LV+ + L K I+ + + PF
Sbjct: 63 TMQLSKNSKILSVLYNQANLKLVQKRNLSKGTIIKIDSMPF 103
>UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7;
Archaea|Rep: 30S ribosomal protein S8e - Picrophilus
torridus
Length = 125
Score = 67.3 bits (157), Expect = 2e-10
Identities = 33/92 (35%), Positives = 52/92 (56%)
Frame = +1
Query: 61 RRATGGKRAPIXKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 240
R+ +GGK P KR+YELGR TRLG + + +RS GGN+K+ LR D N +
Sbjct: 10 RKPSGGKLRPNHSKRRYELGREPTLTRLGDRELRKIRSYGGNSKFALLRCDYANVYNPKD 69
Query: 241 CSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 336
+TRK +I V N+++ V+ + + ++
Sbjct: 70 KTTRKVKINTVKENSADPHYVQRNIMNRGTVI 101
>UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5;
Archaea|Rep: 30S ribosomal protein S8e - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 125
Score = 65.3 bits (152), Expect = 9e-10
Identities = 36/92 (39%), Positives = 53/92 (57%)
Frame = +1
Query: 61 RRATGGKRAPIXKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 240
R+ +GG+ K++ E+GR A T +G +R VR+ GGN K RALRL+ S +
Sbjct: 9 RKPSGGRYHTSQGKKRTEIGRAPAETHIGEERRRIVRTFGGNQKVRALRLEYATVSNPAT 68
Query: 241 CSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 336
T+KT+I V N+++ VR K L K AI+
Sbjct: 69 GETKKTKIEAVEANSADPNYVRRKLLTKGAII 100
>UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03085 protein - Schistosoma
japonicum (Blood fluke)
Length = 120
Score = 61.7 bits (143), Expect = 1e-08
Identities = 38/88 (43%), Positives = 50/88 (56%), Gaps = 9/88 (10%)
Frame = +1
Query: 322 KNAIVVVXATPFRQWYESHYTLPLGR-----XKGAKLT--EAXEAIINKKRSXKTARKYL 480
K+AIV + PFRQW+E+ Y LG KG +T E + KKRS +K+
Sbjct: 1 KSAIVQIGGAPFRQWFEAPYLKELGPPKVVCKKGPSVTPENPEEDFLLKKRSKSALKKFE 60
Query: 481 ARQRL--AKVEGALKXQFHTGRLLACVA 558
RQ L A VE +LK +F TGRLLAC++
Sbjct: 61 TRQALPQANVEESLKEEFVTGRLLACIS 88
>UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Thermoplasma acidophilum
Length = 127
Score = 59.3 bits (137), Expect = 6e-08
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Frame = +1
Query: 61 RRATGGKRAPIXKKRKYELGRPAANTRLGPQRIHSV-RSRGGNTKYRALRLDTGNFSWGS 237
++ATGG KKR++ELGR T+LG + V R+ GGNTK +T N S
Sbjct: 10 KKATGGSLKQSRKKRRFELGREPTLTKLGTKTERKVIRTMGGNTKVILFTAETANVYDAS 69
Query: 238 ECSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 336
E +K +II V N +N+ V+ + K ++
Sbjct: 70 EKKIKKAKIITVKANPANSHYVQRNIINKGTVI 102
>UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6;
Archaea|Rep: 30S ribosomal protein S8e - Pyrococcus
horikoshii
Length = 127
Score = 54.8 bits (126), Expect = 1e-06
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Frame = +1
Query: 61 RRATGGKRAPIXKKRKYELGRPAANTRLGPQ-RIHSVRSRGGNTKYRALRLDTGNFSWGS 237
++ +GG+ KKRK ELGR +NTR+ Q + +R+ GGN K R N +
Sbjct: 10 KKPSGGRIVLARKKRKRELGREPSNTRVAEQDKRKIIRTYGGNRKVRLTAAAYANV-FDK 68
Query: 238 ECSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 336
RK RII V+ N +N + R + K AI+
Sbjct: 69 SGKGRKVRIIRVLENPANRQFARRNIITKGAII 101
>UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Uncultured methanogenic archaeon RC-I
Length = 125
Score = 53.2 bits (122), Expect = 4e-06
Identities = 30/92 (32%), Positives = 44/92 (47%)
Frame = +1
Query: 61 RRATGGKRAPIXKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 240
R+ATGG+ KRK+ELGR +G Q++ + G +K R L+ D N +
Sbjct: 9 RKATGGRLRLNRSKRKFELGRDFTIPVIGAQKLKVLNVTGNGSKVRVLKSDVVNVTDPKT 68
Query: 241 CSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 336
T+K ++ V N +N VR L K V
Sbjct: 69 GKTQKVKMTTVTENPANKNYVRRNFLTKGTFV 100
>UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4;
Archaea|Rep: 30S ribosomal protein S8e - Sulfolobus
solfataricus
Length = 133
Score = 52.4 bits (120), Expect = 7e-06
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Frame = +1
Query: 61 RRATGGKRAPIXKKRKYELGRPAANTRLGPQRIH-SVRSRGGNTKYRALRLDTGNFSWGS 237
R+ TGG + KRKYE+G P T L + I R+ GGN K R T N +
Sbjct: 10 RKITGGLKGKHRDKRKYEIGNPPTFTTLSAEDIRIKDRTLGGNFKVRLKYTTTANVLDPA 69
Query: 238 ECSTRKTRIIDVVYNASNNELVRTKTLVKNA 330
+ +K +I++++ +N EL R +++ A
Sbjct: 70 TNTAKKVKILEILETPANKELARRGIIIRGA 100
>UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3;
Desulfurococcales|Rep: 30S ribosomal protein S8e -
Aeropyrum pernix
Length = 136
Score = 51.6 bits (118), Expect = 1e-05
Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Frame = +1
Query: 31 MGISRDHWH-KRRATGGKRAPIXK-KRKYELGRPAANTRLG---PQRIHSVRSRGGNTKY 195
MGI + W K++ +GGKR K KRKY GRP T L + VR+RGG+ K
Sbjct: 1 MGIYQ--WRDKKKPSGGKRRYYYKVKRKYAAGRPPTYTTLSAAEEEERKPVRARGGSYKI 58
Query: 196 RALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 336
+A ++ S RK RI+ +V ++ E R +VK A++
Sbjct: 59 KAKKVAFAVVSNPKTGEARKARILRIVETPAHREYARRGIIVKGAVI 105
>UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S8e -
Methanopyrus kandleri
Length = 133
Score = 51.2 bits (117), Expect = 2e-05
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Frame = +1
Query: 52 WHKR---RATGGKRAPIXKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDT- 216
WH R + TGG+ P KKRK+E+G P T +G +R + R GGN K + L+ T
Sbjct: 4 WHGRSLRKPTGGRIRPHRKKRKFEMGNPPTETLVGEERKLKERRGMGGNVK-KGLKFATH 62
Query: 217 GNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 336
N + + RI +VV N ++ R + K AI+
Sbjct: 63 ANVADPETGEVKCVRIEEVVKNPASQYYERHGVITKGAII 102
>UniRef50_P61300 Cluster: 30S ribosomal protein S8e; n=5;
Methanococcus|Rep: 30S ribosomal protein S8e -
Methanococcus maripaludis
Length = 128
Score = 50.4 bits (115), Expect = 3e-05
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = +1
Query: 58 KRRATGGKRAPIXKKRKYELGRPAANTRLGPQ-RIHSVRSRGGNTKYRALRLDTGNFSWG 234
+R +TG K KK K E+GRPAA T++ + + VR RG N K + + + N
Sbjct: 9 RRLSTGAKVWRAAKKHKREMGRPAAETQVSDKIKRKIVRCRGANLKVKLEKTNYANVFDQ 68
Query: 235 SECSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 336
+ +K + +V+ N +N +R + K AI+
Sbjct: 69 ANKVCKKVVVTNVIDNKANKHYIRRNVMTKGAII 102
>UniRef50_A0RXG5 Cluster: Ribosomal protein S8E; n=2;
Thermoprotei|Rep: Ribosomal protein S8E - Cenarchaeum
symbiosum
Length = 129
Score = 48.0 bits (109), Expect = 1e-04
Identities = 26/91 (28%), Positives = 46/91 (50%)
Frame = +1
Query: 64 RATGGKRAPIXKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSEC 243
+ TGG+R P+ +RKYE+ R G Q + + RG TK +D N +
Sbjct: 12 KLTGGRRHPLRTRRKYEIDRYPNEALSGAQETVTRKVRGKRTKTALKTIDFVNLA-VQGA 70
Query: 244 STRKTRIIDVVYNASNNELVRTKTLVKNAIV 336
+K++I+ V+ N +NN+ R + + A++
Sbjct: 71 KVKKSKIVKVLENPTNNDYRRRGVITRGAVL 101
>UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_54, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 110
Score = 47.6 bits (108), Expect = 2e-04
Identities = 33/88 (37%), Positives = 48/88 (54%)
Frame = +1
Query: 295 ELVRTKTLVKNAIVVVXATPFRQWYESHYTLPLGRXKGAKLTEAXEAIINKKRSXKTARK 474
ELVRT+TLVKNAI+ Q Y HY L +G K A T + +++ RK
Sbjct: 31 ELVRTQTLVKNAII--------QRYLQHYGLDIGCKKKASTTPRKK----ERKGNHVVRK 78
Query: 475 YLARQRLAKVEGALKXQFHTGRLLACVA 558
RQ+ K++ ++ QF +GRLLA ++
Sbjct: 79 LEKRQQDHKLDPHIEEQFGSGRLLAAIS 106
>UniRef50_Q2NEU6 Cluster: 30S ribosomal protein S8e; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 30S ribosomal
protein S8e - Methanosphaera stadtmanae (strain DSM
3091)
Length = 126
Score = 47.2 bits (107), Expect = 3e-04
Identities = 28/92 (30%), Positives = 44/92 (47%)
Frame = +1
Query: 61 RRATGGKRAPIXKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 240
R+ +G + KR E GR A TR+G + + +RG TK RA N +
Sbjct: 10 RKPSGARSRRNKNKRNAEFGRNPAETRIGDEVKKEIVARGNCTKTRATVAKRINVIDPKD 69
Query: 241 CSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 336
S++ ++ V+ N +N+ VR + K AIV
Sbjct: 70 NSSKNVEMLTVLENGANSHFVRRNIITKGAIV 101
>UniRef50_Q2W531 Cluster: TPR repeat; n=3; Magnetospirillum|Rep: TPR
repeat - Magnetospirillum magneticum (strain AMB-1 /
ATCC 700264)
Length = 556
Score = 36.3 bits (80), Expect = 0.49
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1
Query: 67 ATGGKRAPIXKKRKYELGRPAANTRLGPQRIHSVRSR 177
A G +RAP K YE R AA TRL P + ++R R
Sbjct: 268 ALGAERAPANLKANYEKERDAAGTRLSPAELEALRGR 304
>UniRef50_UPI0000DB7956 Cluster: PREDICTED: similar to Deformed
CG2189-PA; n=1; Apis mellifera|Rep: PREDICTED: similar
to Deformed CG2189-PA - Apis mellifera
Length = 284
Score = 32.3 bits (70), Expect = 8.0
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +2
Query: 47 ITGISEGPPVGNVRPYXRRGSMS*GVPLQTPGSALSESTPFVHVVEILS 193
+TG+ EGPP G + GS+S P +P + L S P +H I S
Sbjct: 230 VTGMMEGPPGGGPLGHIASGSISPLAPATSPSATLQVSAP-IHPPPIKS 277
>UniRef50_A5V4W5 Cluster: TonB-dependent receptor precursor; n=1;
Sphingomonas wittichii RW1|Rep: TonB-dependent receptor
precursor - Sphingomonas wittichii RW1
Length = 803
Score = 32.3 bits (70), Expect = 8.0
Identities = 20/66 (30%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Frame = +2
Query: 44 GITGISEGPPVGNVRPYXRRGSMS*GVPLQTPGSALSESTPFVHVVEILSTVR-CVWTPV 220
GI + GN Y G P GS L P + + STV+ WTP+
Sbjct: 488 GIRWTEDKKTFGNANQYVVEAGFLTGAPFNPDGSGLQNGDPLMGPLGQRSTVKDTAWTPM 547
Query: 221 TSLGDR 238
SL R
Sbjct: 548 ASLSYR 553
>UniRef50_A7F1W3 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 622
Score = 32.3 bits (70), Expect = 8.0
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -1
Query: 299 NSLLDALYTTSMIRVLRVEHSDPQEKLPVS 210
N L D +Y T I +R EH DP++ LP S
Sbjct: 309 NLLFDTIYATPPIARVRSEHEDPRDNLPDS 338
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,678,207
Number of Sequences: 1657284
Number of extensions: 10662410
Number of successful extensions: 26008
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 25352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25989
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37488397230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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