Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19p04
         (560 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    26   0.25 
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    25   0.44 
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    25   0.59 
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    24   0.78 
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    23   1.8  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    23   1.8  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    23   1.8  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    23   2.4  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   3.1  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    22   4.1  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   4.1  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    21   5.5  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    21   5.5  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    21   7.2  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    21   7.2  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    21   9.6  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    21   9.6  

>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 25.8 bits (54), Expect = 0.25
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 339 YNNCILDKGLCT 304
           Y NC+LDKG CT
Sbjct: 41  YVNCLLDKGRCT 52


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 339 YNNCILDKGLCT 304
           Y NCI+D+G CT
Sbjct: 41  YFNCIMDRGACT 52


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 24.6 bits (51), Expect = 0.59
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 339 YNNCILDKGLCTHQ 298
           Y +C+LDKG CT +
Sbjct: 41  YLDCVLDKGKCTKE 54


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 24.2 bits (50), Expect = 0.78
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 339 YNNCILDKGLCT 304
           Y NC+L+KG CT
Sbjct: 46  YVNCLLEKGKCT 57


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 339 YNNCILDKGLCT 304
           Y +CIL+KG CT
Sbjct: 42  YLDCILEKGKCT 53


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 339 YNNCILDKGLCT 304
           Y NC+LD+G C+
Sbjct: 44  YVNCLLDRGKCS 55


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 339 YNNCILDKGLCT 304
           Y NC+LD+G C+
Sbjct: 44  YVNCLLDRGKCS 55


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +2

Query: 89  PYXRRGSMS*GVPLQTPGSALS 154
           PY   G    G+PLQ PG  L+
Sbjct: 178 PYPNFGVPPAGIPLQNPGLNLN 199


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 339 YNNCILDKGLCT 304
           Y NC+L+KG C+
Sbjct: 56  YINCLLEKGPCS 67


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 339 YNNCILDKGLCT 304
           Y +CIL KG CT
Sbjct: 43  YIDCILGKGKCT 54


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -3

Query: 342 YYNNCILDKGLCTHQ 298
           YY  C+L KG C  Q
Sbjct: 42  YYAACLLSKGPCPPQ 56


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 339 YNNCILDKGLCT 304
           Y +C+L KG CT
Sbjct: 43  YLDCVLGKGKCT 54


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 339 YNNCILDKGLCT 304
           Y +C+L KG CT
Sbjct: 43  YLDCVLGKGKCT 54


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = -3

Query: 339 YNNCILDKGLCT 304
           Y NC++++G C+
Sbjct: 46  YFNCLMERGTCS 57


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 339 YNNCILDKGLCTHQ 298
           Y  C++D+G CT +
Sbjct: 45  YIKCLMDEGPCTSE 58


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 339 YNNCILDKGLCT 304
           Y NC+L+K  CT
Sbjct: 45  YVNCLLEKKPCT 56


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 339 YNNCILDKGLCT 304
           Y +C+L+KG C+
Sbjct: 48  YVDCLLEKGRCS 59


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,778
Number of Sequences: 336
Number of extensions: 2693
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)